Trematomus bernacchii (emerald rockcod): 117480837
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Entry
117480837 CDS
T09643
Name
(RefSeq) platelet glycoprotein Ib alpha chain-like
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117480837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tben04090
]
117480837
CD molecules [BR:
tben04090
]
Proteins
117480837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
DUF8060
LRR_5
LRR_LRWD1
SOG2
Motif
Other DBs
NCBI-GeneID:
117480837
NCBI-ProteinID:
XP_033984213
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MHIFLIFLLFVLLVATVTAVFGCHGGRDKDHRRQENCTAAGFTGVPTGLEPATKVLLFPQ
NLFSSLSWSSFQIFTEIYEIDLTGNKVPELTPSSAPILPSLRVLRLGSNRLTSLPDGSFS
ACPALTELYLEGNAVVSLSDNTFSGLSKLEILDLSSNRIQVLPQLMLQPLAVIETLNIEN
NKVLAMPDGWFSPKEDVPYLFLSANPWACSCSLGYLRRYIDEYEFNVYVRNGPILKTDPW
SVVCDSPLRHKATAVLNLEESELCPPEPEHPIRGDGNKPMETVAPTVPVLTNTPIHTTTT
AVSMTTAFPTTPPIPSSPLTPTFVEWSDHSTNAQTDPLTAAKTTTTTTKATTTTPMATTT
TPIATTTTPMATTTTPMATTTTPIATTTTTKATTTTPIPTTTTTKATTTTTKATTTAGDD
SVTGRFRSVRGAGVFCFWLFAGCSLLCLVSAVAILATVARMVFWYRRVYKPISAALTRRQ
EVVRLLTREGRDEGSAVYRSVLYVHREGGVEEERGETGGGLQEHDVPSDEQRRGSGGEES
DGGVSGIGGGKGEENGGFQEALQRYFEGGGGGEGGEGVGGGGVGGGGGRGKEQLGGVAYS
LLTQHALGCGPAS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcttcctcatcttcctcctcttcgtcctcctcgttgctacggtaacagcggtt
tttggttgtcacggcggcagagataaggaccaccggagacaggaaaactgcaccgcggca
ggattcaccggagtaccgacgggactcgaacccgcgaccaaggttttgttgtttccccag
aacctattctccagcctctcctggtcctccttccagatcttcacggagatctacgagatc
gacctcactggaaacaaggttccagagttgacccccagctccgctccgatcctccccagc
ctcagagtcctccggctgggatcgaaccggctgacctccctccctgatggatccttctcc
gcctgtccggcgctgactgaactctacctggagggcaacgccgtggtttctctgagcgac
aacaccttctccggactcagcaagctcgagatcctggacttatcgtccaatcgtatccag
gttcttcctcagctcatgctacaacccctcgctgtgatcgagaccctgaacatcgagaac
aacaaggtcctggcgatgcctgacggttggttcagcccgaaggaggacgtgccgtacctt
ttcctctcggccaatccctgggcctgctcctgttccctcggttacctgcgcagatacatt
gatgaatatgaattcaacgtgtacgtacggaatggaccgatcctcaagaccgacccttgg
agcgtggtgtgcgactctcctctgaggcataaggcaacagctgtattgaatcttgaagaa
tctgagctgtgtccaccagagccagagcatccgatacgtggagacggaaacaagccaatg
gaaactgtggctcccaccgtcccagttcttactaatactcccattcataccactactact
gctgtttctatgactactgctttccctactacacctcctatcccttcttctcctttgaca
ccaacgtttgtagaatggtcagaccactcaacaaatgcccaaactgatcctttaaccgcg
gccaagacgaccaccaccactacgaaggcaacaaccaccacccccatggcaacaaccacc
acccccatagcaacaaccaccacccccatggcaacaaccaccacccccatggcaacaacc
accacccccatagcaacaaccaccacaaccaaggcaacaaccaccacccccataccaaca
accaccacaaccaaggcaacaaccaccactaccaaagcaacaacaaccgccggcgatgac
tcagtaaccggtcgatttcgcagcgtccgaggcgctggggttttctgtttctggcttttc
gccggctgctccctgctgtgcttggtgtcggcggtggccattttggcgaccgtggcgagg
atggtgttctggtaccggcgggtctacaagccaattagcgcggcactaacgaggaggcag
gaggtcgttaggctgttaacgagggaagggagggatgaggggagtgctgtgtatcgctca
gttctgtacgtccatagagaggggggagtcgaggaagaaaggggggagacgggagggggt
ttacaggaacacgatgtaccgagtgatgagcaaagaagaggaagtgggggggaggaaagt
gatggaggagtgtcaggtatcgggggaggaaagggggaggagaatgggggattccaggaa
gcgctacagcgttattttgagggaggaggcgggggggaggggggagaaggagtgggtggt
gggggggtgggagggggcgggggaagaggcaaggagcagctggggggagtggcttactca
ttacttacccagcatgccctggggtgtggccccgcctcctga
DBGET
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