Trematomus bernacchii (emerald rockcod): 117480918
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Entry
117480918 CDS
T09643
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117480918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117480918
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
GGA
117480918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
PCRF
Hrs_helical
LMBR1
MCCD1
cas_Cpf1_2nd
DUF848
Motif
Other DBs
NCBI-GeneID:
117480918
NCBI-ProteinID:
XP_033984240
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAAAPPDEATLQSRINKATNPLNKDTDWDIIKGFCDQLNNDPEGPQLATRLLAHKVQSPQ
EWEAMQALLVLETCMKSCGKRFHIEVGKFRFLNELIKVVSPKYLGTRAPELVKNKVIEIM
FSWTVKMPHETKIADAYHMLKKQGIVKVDPALPEDKPLPPPAARAKNIIFEDEEKSKTLS
LLLNSTQPEDLRAANKLIKEMVQEDQKRVEKVSKRLNAIQEVKESVSLLSQMLEGYSRES
CSQSNQELIKDLYQRCEKMRPTLFRLASDTEDSDEALAEILQANDSLTQVINLYRQLVKG
EDVSKDGLTTSPQTGGSSSALVDLMGLNASANTAPSDPEPLSLQTLTQNMGISLLDDELM
SLGLNVTENFDSQNTFQSSDGTESSAALGPAVLQPAVVQTAAPPAGGPAAPPKPIEGLDL
LGKTLLQQSLPPESQQVKWDKLQPQSRVTLRDMQTKSNANPKATSISSNPAPAPVPTFSL
TVQSEPPDSLLLPNLSLAVSADPYDNISLADVTVPLEAIKPSSLLPVTVFDKHSLRVLFT
FAHDCPPSRPEVLVVIISMLSSAPIPVTNIRFQAAVPKVMKVKLQPPSSTELPAYNPILP
PAAITQILLLANPHKEKVRLRYKLTFNLGDTSHDESGDVDQFPPPHTWGSL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcctccggatgaggctaccctgcagtctcgcatcaacaaggccaccaac
cctttgaataaggacactgactgggacattatcaagggattttgtgatcagctcaacaat
gatccagaaggtccccagcttgcaaccagactcctggcccacaaagtccagtctcctcag
gaatgggaggctatgcaagcgcttctggttctggagacgtgcatgaagagctgtgggaag
cgatttcacattgaagtgggaaagtttcgctttctcaatgagctcatcaaagtggtgtca
cccaagtatttgggtacccgggctccagagctagtgaagaataaggtgatagaaataatg
ttcagctggacagtgaagatgcctcatgagactaagatagcagacgcctatcatatgctg
aaaaaacagggcattgtgaaggtagatcctgcacttcctgaggacaagcccctcccaccc
ccagcagccagagccaaaaacatcatctttgaggatgaggagaaatccaagacgctgtct
ctcttgttgaacagcactcaaccagaagatctaagagcggcaaacaagctcattaaggaa
atggtccaggaggaccaaaagcgcgtggagaaggtatcaaagcgactgaacgccatccag
gaggtgaaggagagtgtgagcctgctgagccagatgctggagggctacagcagggagagc
tgctcccagagcaaccaggagctcattaaggatctttaccagcgctgtgaaaagatgagg
ccgacacttttccggttagcaagtgatacagaggacagtgacgaagcactagctgaaata
ttacaggccaatgacagcctgacgcaggtcatcaacctgtacagacagctggtgaaggga
gaggacgtgtccaaggacggtctcaccacgtccccacagacaggcggcagtagctcagct
ctcgtagacctgatgggacttaacgcatccgcaaacacagcaccatccgacccagagccc
ctcagcctgcagaccctcactcagaacatgggcatcagcctcctggatgatgagctcatg
tcactaggattgaatgtaacggagaactttgactctcagaacacttttcagtcctctgat
ggcacagagtcctctgctgcattgggccctgcagtgttgcagcccgctgtggtccaaaca
gcggctccaccagcagggggccctgctgctccacccaaacccatagaagggctggacctg
ttggggaagaccttgttacagcagtcccttcctccagagagccagcaagtcaaatgggat
aaactccaacctcaatccagagtcactttacgagacatgcagaccaagtccaacgccaac
cctaaagcaacctccatctcctccaatcccgctcctgctcctgtgcccacattcagcctg
acagtccaatcagagcctccggactctctcctcctccccaatctcagtctggcagtttct
gctgacccctacgacaacatctctctagctgacgttaccgtgcctctggaagcaatcaag
cctagcagcttattaccagtgactgtattcgacaaacacagtctccgggttttattcacc
tttgctcatgactgtcctccatcccggcccgaggtgctggtggtgatcatctccatgctg
tcctccgcccccatccccgtcaccaacatccgctttcaggccgccgtaccaaaggtgatg
aaggtgaagctgcagcccccctccagcacagagctccctgcctataaccccatcctgcct
ccagctgccatcacacagatcctgctgttggccaatcctcacaaggaaaaagtacgtctg
cgttacaagctgacgttcaacctaggggacacatctcacgatgaatccggagacgtggac
cagttcccgcccccccacacctgggggagcctttag
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