Trematomus bernacchii (emerald rockcod): 117480968
Help
Entry
117480968 CDS
T09643
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117480968 (chaf1b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117480968 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
CAF-1_p60_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
B-prop_COPA_B_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SCAP
KNTC1_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
117480968
NCBI-ProteinID:
XP_033984276
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSLDFQHSPDGRICRLATAGVDTTVRLWRVDMGPDGKAVVDFLS
NLTRHTKAVNVVRFSPNGELLASGGDDAAILLWKLNDSKEPEPIPMFQEDEDALLNKESW
TVVKTLRGHIEDVYDICWTRDASSMISGSVDNTAIMWDINKGTKLSILNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTHTKKKAFCISKMSSGPLAEGEVKQHRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEIGENIINTTYIFSRKSLKRPIAHLPCPSKATLAVRCCPVYFE
LRTKTLEDGTVQTLPNVFQLPYRMVFAVASEDSIYLYDTQQTLPFGLVSNIHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTALKEPPTLEIFTPSTATEKKGKKSAAARNSS
PQTPTSQTIISKVTPLTPVTPLTPVTPPEEKKSTPSAKSKPQPRRITLNTLQGWGKPSSP
KTTAPPAPQTPTSESSSAPSTPQARIAPLTPTQSSSTHPRLTPLTPTNSSTTQPRISPLT
PSTPKASGNNAGQTTPKGTTTPKGPTPRRVSLTTVASRSPAVSSLFRTPSSTEKAKHERP
SPTNDPVCQPPEPKRSKTSEPAAKSSATQT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggttacgtgtgagattgcatggcacaacaaggagccagtctacagtctggac
ttccagcacagcccggatggtcgcatttgtcggctggccacagctggagtggacaccaca
gtcagactgtggcgggtggacatgggccctgacgggaaggcagtggtggactttctgtct
aatctgaccagacataccaaggctgtgaacgttgtgcgcttcagccccaatggagagctg
ctggcctcaggaggagatgatgcagcgattctgctgtggaagctcaacgactctaaagag
cccgagccgatacccatgttccaggaggatgaggatgctctgctcaacaaagagagctgg
actgtggtcaagactttaaggggtcacatagaggatgtgtatgacatctgctggacacgg
gacgcaagctccatgatctccgggtctgttgacaacacggctattatgtgggacatcaac
aaaggaacgaagctgtccatcttgaatgaccataagagttacgtgcagggggtgacctgg
gatcctctggggcaatatgtagccactctcagctgtgacagagtgatgcgtgtgtacagc
actcacaccaagaagaaagccttctgcatcagtaagatgagctctgggcctctcgcagag
ggagaggtgaagcagcacagaatgttccatgacgacagcatgaggtcgtttttccgtcgt
ctttctttcacaccagatgggtctttcttgctcgccccagctgggtgcgtggagattgga
gaaaacatcataaataccacctacatcttttccaggaagagtctcaagaggcctatcgca
cacttgccatgtccgtctaaagctacactggctgtgcgatgctgccccgtctactttgaa
ctgaggaccaagacgctagaagatggtacagttcagactcttcccaacgtcttccagttg
ccgtaccgcatggtgttcgctgtggcgtctgaggactccatctacctgtatgacacgcag
cagacccttcccttcggcctggtgtcaaacatccactaccacacactcagcgacctcaca
tggtcccgggacggctccttcctggcggtgtcctccacagacggctactgctccttcctc
tccttctctcctggggagctgggcactgcgctgaaggagccccccaccctggagatcttt
acaccaagcactgctactgagaaaaagggcaagaagtcggcagctgctagaaactcgtct
ccccagacccccacatcccaaaccatcatcagcaaagtcacccctctcacccctgtcacc
cccctcacccctgtcacccccccagaggagaagaagagcaccccgagtgccaagtccaaa
cctcagccccgaagaatcaccctgaacaccctgcagggctgggggaagccctcctcccct
aaaaccacagctcccccagcccctcagaccccaacgtctgagagctccagcgcaccctcc
actccccaggctcgcatcgcccctctcaccccgacccagtcctcctcaacacatccacgt
cttacccctctcacccctaccaattcgtccacaacacagccccgcatctcccccctcact
ccctccacccctaaggccagtggtaataacgctgggcaaacgactcctaaaggtaccacc
accccaaaggggcccaccccaaggagggtatctttgactacagttgcatcccgatctcca
gctgttagttcactcttccgcactccctcctccactgagaaggccaaacacgaacgccct
tctcctaccaacgatccggtgtgccagcctccagagccaaaacggtccaagaccagtgag
ccggcagcgaagagcagtgccacccagacttaa
DBGET
integrated database retrieval system
