Trematomus bernacchii (emerald rockcod): 117481059
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Entry
117481059 CDS
T09643
Symbol
bcor
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117481059 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117481059 (bcor)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117481059 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
117481059
NCBI-ProteinID:
XP_033984435
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MVDARLTPLAAMGLDRGTLMHDGLRLHGGVVYPGIRALPAEKSREGPSHPLTYNRDGLQE
LIYNSDGPLDSRKPSNGYLGLYKGTPPGLHKPMMIPGTEGLGLDRRLGHGEKVSELGLAG
AGGGYLRLPWFNPYPEASMYPFMDTSKYAALNMYKASLMSQPNPYLPQHLAYASGNVNPS
AAERLYYMPHYPQSPISSPMVAPPMRIPTVTVAPTSLVHCQDKGLGVAPQFAQQLHQPSP
HSQHHQAAMDRDRSPSRSSRPSRPPSRKTTSNNNNTSSTSGSNGGNNNSLPTDSSPHASS
RQPQPPPPPTLIDNSLDLQRAVSRIGHPATSSAASVSSSSTQSIPHPFSVSSMAAEQPSP
ARPSPHKSRPRDGEQRSAGVERRHSRSPSKANCEKPAHQHKATKDLPEKPLDLSGRMLEF
GLAPNGFPVKMDAIPSSARYGLPPNRELLKENLSLSPSSHPHSVVSSTSSKVPERPEMIS
TLHSSWVVPSPSPSRTQHTPGLPPSPRPNGDLGLSQAKGSSPSVIKQKGLERVLPQQRSS
SCPRIGEPNHNVPSTQHSSHVSSRAISPKPNGEWVNHSPSHSEHPGHHREGIEKPSQKRE
GTTPELSSYKRPCLENGHPPGHLYLPQSDAYLNHSLAYANRYLHYPIPDGMALHSLPIPG
KGPVYPHPVLLGSNSLYPPHLAKHPLPYHNLPAGPGGEYLTYNTQEMAHPLMHTPSEKLA
ERGEATLKHRGQEKSRGAVEEGRVHRDHNIGKEMSEGSQIKSDKEGPSRNHSKTSSSTFR
EKIVCIDLVHSDTDIESTPTVHKQPSAETSSKVNQNECCHSNQNLTKTDYELKHQPHLSH
PYPIHSGQSPTLKPNHSDRHPETPFGKPNVFQETGCPGGISSMLPNSPGQFTRGEESSEE
RSPSPDVEDQDQSTLRCARTSGERSSGKHKGDRDIRARHSSQHFIDVVKEERVYEGETEK
EDSIVDLGESHGEGDEDDEEDGLSSPRGSRRSSLAKRIANSTGFVGDRIKCVTTELYADS
SKLSREQRALQMEVLSREGSNISQPAANWERAMMRFSELELKEKEGGGVCVSASAAGREL
ADGQRRERVLEHCQHTTRREEREGVLSPAYANNRVPVLQRCGGQIEPLSPGHRAREGAGQ
EGLNDGVRKLKRELEGGHCLPPILTPAKGFPEEKHSPGFGASRKRQLCLKAEREDSEWEE
AERVFHPEKRARISTDEREQASPDEDDDDEVRKLKVCIELKGLRLSKPAAGAASPDGCLI
KQERLWPQQRLIAPAQSIRERKARPGEPEDRAAAHRAEINRKWGCEKLLNGVAASPLPPS
QLKDRAHPQGPFSGDRGLKEPRRGPPSPAPDPSVGGPPPIKPRRHSDTDKPKGKRPCKTK
HTSQREREREKRKEATPNSPGQRCAADLGAAEDDKLSDQRGAPRKGAASPNHYPCSPVKP
CSPATLCPPCLQPQVNGRACGAAPELVGVHRTPPAEPPAVRPIPPEARRLIVNKNAGETL
LQRAARLGYEEVVLYCLENRVSEVNHRDYAGYCALHEACARGWLSIVQHLLDYGADINCS
AQDGTRPIHDAVENDHLDVVRVLLSYGADPTLATYSGRGLLKMTHSDGMQRFLSDYFADL
QGRSDDDPGLYWEFYGSAVCELSEEGGVYDILADPPGPEDEDEDDKREVFEFEFSDRPLL
PCYNIQVSLSQGPRNWLLLSDVLRRLRMSGRGFRQAFPHMEVVTVAEAEFYRQASLSQLF
SCPEELEGFHADSKDLLDLVEDSGELAALLGSTLECLDDRWDHPGDKLKDKIKANGKLGS
S
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttaacgcccctggcagcaatggggctggaccgaggcaccctgatg
cacgatggtcttcgtctccatggaggggttgtgtacccaggcatcagagcactaccggcg
gagaagagccgtgaggggccctcacaccccctcacttataacagagatggtctccaagag
ctcatctacaattctgatggccctctggacagtcgtaagcccagtaatggatacctgggt
ctttacaaaggcactcctccaggactccacaagcctatgatgattcccggaactgaaggt
ttaggcttggaccgcagattagggcatggagaaaaggtctctgagctgggcttggcaggt
gctggtggcggctacctccgcctgccgtggttcaacccctaccctgaagcgagcatgtat
cccttcatggacacatccaagtacgcggctctaaatatgtacaaagcctccttgatgagc
caacccaacccctatcttccccagcacctggcctacgcgtctggtaatgtaaacccctct
gccgctgagaggctctactatatgcctcactatcctcagtcccccatctcttctcccatg
gtggcgcctcctatgaggattcctacagtcacagtggcccccacttcactggtacactgc
caggacaaggggctcggtgttgcgcctcagtttgcacagcagcttcaccaaccttcccct
cattctcagcaccatcaggctgctatggacagagaccgctccccaagcaggagcagcaga
ccaagtagacctccctctaggaagactactagcaacaacaataataccagtagcactagt
ggctccaatggtgggaataataatagtctgcctactgattcttctcctcatgcgtcttcc
cgccaaccccaacccccccctcctcccacactcattgacaattcactggatttacaaaga
gcagtctctaggataggacacccagccacctcatcagctgcatcagtatcatcctcatcc
acacagtccattcctcacccattctctgtaagcagcatggcagcagagcagccttctcct
gcccgacctagcccccacaaatctaggccaagagacggggaacaaagaagtgcaggggtt
gagaggagacatagcaggtccccttcaaaagccaattgtgagaagccagctcaccaacac
aaagcaaccaaagacttgccagagaagcccttggatttgtctggaagaatgcttgagttt
gggttggctcccaatggtttcccagttaaaatggacgctataccatcaagcgcacgatat
ggattgcctcctaatcgggagcttctaaaagaaaacctgtctctctctccttcctcccac
ccccactctgtggtcagcagcacttcttcaaaggtccctgagaggccagaaatgatcagc
actttacactcctcctgggttgtacctagcccttccccttcccgtactcagcacacaccc
ggcctgcccccctctccaaggcctaacggagacctgggcctttcacaagccaaaggctcc
tcaccctctgtcatcaaacaaaagggtctggagagggtactccctcagcaacgtagctca
tcctgtccaaggataggagagccaaaccataatgttccctccactcaacactcctctcat
gtcagctccagggctatatctcccaaacccaatggtgagtgggtcaatcacagccctagc
cattcagaacatccgggccaccacagagaggggattgaaaagccctcacagaagagagaa
ggaacgactccagagctgtcttcctacaagaggccctgtttagagaatggtcaccctcct
ggccacctttaccttcctcaaagtgacgcttacctgaaccacagtttggcttatgccaac
cgatacctgcactaccccatccctgatggcatggcactacactccctgccgattccaggg
aaaggaccagtctaccctcacccagtattgctgggcagcaacagcctttacccaccccac
ttagcaaaacaccctttaccctaccacaacctcccagctggtccaggaggggaatacctc
acgtataacacacaggagatggcccatcccctgatgcacactccctcagaaaagctggca
gaaagaggagaggcaactttgaagcaccggggacaggaaaaatcccggggagctgtcgaa
gaaggcagggtccacagagatcacaacattgggaaagagatgagtgaaggaagccaaata
aagtctgataaggaaggaccgagtcgcaatcatagcaaaacatcctcttcaacattcaga
gaaaagattgtctgcatcgaccttgtacattcagacacagatattgagtctaccccaaca
gtccacaaacagccctccgctgagaccagcagcaaggttaaccaaaatgaatgttgtcat
agtaaccaaaatctgacaaagactgactatgagctaaaacaccaaccccacctttcccat
ccttatccaatccactcgggacaaagcccaaccctgaagcccaatcactccgatagacac
ccagaaacgccctttgggaaaccaaacgttttccaggagacgggctgtcctgggggaata
tctagcatgttgccaaattctccagggcagttcacccgaggagaggagagctcagaggaa
cggagcccaagcccagatgttgaagaccaagaccagagcaccttgcgctgtgcccgcaca
tctggggagcgcagctctggtaaacacaaaggggacagagacatccgggctcgtcactcg
tctcaacacttcatagatgtggtgaaggaagagagagtgtatgaaggggagactgaaaag
gaagacagtattgttgacctcggggagtctcacggagaaggggatgaggacgatgaagag
gatggtctgtcttcacctagaggctctcgtagatcaagtctggccaagaggatcgctaac
tccacaggcttcgttggcgaccgcattaaatgtgtcaccactgagctgtatgctgactcc
agcaagctgagccgcgaacagagagccctgcagatggaagtcttatcacgagaggggagt
aatataagtcaacctgcagctaactgggagcgggcaatgatgcggttctcggagctggag
ctgaaggagaaggagggcggcggtgtgtgtgtgtctgcctcggcagcaggacgggagctg
gcagacggccagcgcagagagcgagtgctggaacactgccaacacaccaccaggagggaa
gagagggagggtgtcctgtcgccggcgtacgctaacaacagagttccagtcctccagagg
tgtgggggccagatcgagcctttgtccccagggcatagggcccgagagggtgccgggcaa
gaagggctaaacgatggagtcaggaagttgaagagggagctcgaaggaggtcactgtttg
ccccccattctgacaccggcaaaagggttccctgaggagaagcatagccccggcttcgga
gccagcaggaaacgccagctctgcctcaaggccgaacgggaggactcggagtgggaggaa
gcagaaagggtcttccaccccgagaaaagagccaggatttctacagatgagcgcgagcag
gccagtcctgatgaagatgatgacgacgaggtccggaagctcaaggtctgcatcgagctg
aaggggctgcgactcagcaagccagccgccggcgcagcttcccccgacggctgcctgatc
aaacaggagcggctgtggccccagcaacgattgatcgccccggcccagagcatacgggaa
cgcaaagctcggcccggggagccggaggaccgagccgcggcgcacagagccgagatcaac
aggaagtggggctgcgagaagctacttaatggagtagctgcttctccccttccccccagc
caactgaaggacagggctcacccgcagggccccttctcaggtgaccgtggcctcaaggag
ccgaggaggggccccccctctccggccccagatccgtccgtgggaggcccccctcccatc
aagccccgtcgccatagtgacacggacaaacccaagggcaagcggccgtgcaaaaccaaa
cacaccagtcagagggagcgggagcgggagaaacggaaagaggccacacctaacagccca
ggccagcgctgcgcggctgatctgggagcagctgaggatgacaagctgagtgatcagcgc
ggcgctccgaggaagggagctgcctctcctaatcattatccctgctctccagtcaagccc
tgctcccccgccacgctctgtccgccctgcctgcagccccaggtgaacggcagagcgtgc
ggcgctgcccccgagctggtgggagtgcaccggaccccccctgctgagccccccgcggtg
cgtcccatcccgccagaggctcggcggctaatcgtgaacaagaacgccggagagactctg
ctccagagagctgcgcggctcggctacgaggaggtggtgctgtactgcctggaaaaccga
gtaagtgaggtgaatcacagagactacgccggatactgcgctctgcacgaggcgtgcgcc
cgcggctggctcagcatagtccaacacctgctggattacggggcggacatcaattgcagc
gcacaggatggcactagaccgattcacgacgctgtggagaatgaccatctggacgttgtt
cgagtcctgctttcttatggcgctgaccccaccctggccacatactccggccgcggcctg
ctgaagatgacccacagtgacggcatgcagcgcttcctcagcgattattttgctgacctt
cagggccgctcagatgacgacccggggctttattgggaattctatggcagcgctgtgtgt
gagttgagcgaagagggcggtgtctatgacatcctggctgaccccccgggcccagaggac
gaggatgaggatgataaaagggaggtgtttgagtttgagttctctgaccgccctctgctg
ccttgctacaacatccaggtgtccctctctcaggggcccagaaactggctgcttctgtcg
gacgtgcttcgcagactgcggatgtctggtcgcggtttccgacaggctttcccacacatg
gaggtggtgacggtggcagaggcggagttttaccggcaggcctcgctgtcgcagctgttc
tcctgcccagaggagctggagggcttccacgcggacagcaaggacctgttagacctggtg
gaggacagcggggagctggcggcgctgctcggctccaccctggagtgcctggacgaccgc
tgggaccacccaggggacaaactgaaggacaaaatcaaggctaatggaaagttgggctcc
tcctga
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integrated database retrieval system
