KEGG   Trematomus bernacchii (emerald rockcod): 117481193
Entry
117481193         CDS       T09643                                 
Symbol
lamp1b
Name
(RefSeq) lysosome-associated membrane glycoprotein 1b
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03272  Virion - Hepatitis viruses
tben03273  Virion - Lassa virus and SFTS virus
tben04140  Autophagy - animal
tben04142  Lysosome
tben04145  Phagosome
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    117481193 (lamp1b)
   03272 Virion - Hepatitis viruses
    117481193 (lamp1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117481193 (lamp1b)
   04142 Lysosome
    117481193 (lamp1b)
   04140 Autophagy - animal
    117481193 (lamp1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117481193 (lamp1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117481193 (lamp1b)
   04090 CD molecules [BR:tben04090]
    117481193 (lamp1b)
Membrane trafficking [BR:tben04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    117481193 (lamp1b)
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    117481193 (lamp1b)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    117481193 (lamp1b)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   117481193 (lamp1b)
CD molecules [BR:tben04090]
 Proteins
  117481193 (lamp1b)
SSDB
Motif
Pfam: Lamp2-like_luminal Lamp2_2nd VAS1_LD
Other DBs
NCBI-GeneID: 117481193
NCBI-ProteinID: XP_033984681
LinkDB
Position
Unknown
AA seq 241 aa
MTQIGAVQSWWLGLTLQLILAGVLLQGFAAGQTTEPMRPEKGNYVVSSSNGTACLLASMG
LQLNITFNSVSQNKTVRNIVNLQPNVTKSSGSCDTDTASLRLSTDAEKTNLNFFFSLNTT
SNKYHLSNVSLSAAWPDMKEPVSADNSSLDFLRGTLGFSYMCREQQTLTVSPDLSINTFQ
LQVQPFGVSGDQFGAAEECQLDEDDMLIPIIVGAALAGLVLIVLLAYLIGRKRSHAGYQT
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atgactcagatcggtgctgttcagtcatggtggctgggattaacgttacagttgatttta
gctggcgtcctgctccagggctttgctgctggtcagacaacggagcccatgagacctgag
aagggtaactatgtggtgagcagcagcaacgggacggcctgtttactggcctccatgggt
ctccagctcaacatcaccttcaactccgtgtcccagaataagactgtgcggaatattgtg
aacctccagccgaatgtgacaaagtcctctggatcatgtgacacagacaccgcctccctg
cgactctcaacagatgcagagaagaccaacctcaacttcttcttctcactgaatactacg
tccaataagtaccacctgagtaacgtgtctctgtctgcagcctggccagacatgaaagag
cccgtctcggctgataacagcagtctggacttcctgcgcggcaccctggggttctcctac
atgtgtcgtgagcagcagactctgaccgtgtccccggatctgtccatcaacaccttccag
ctgcaggtgcagcccttcggcgtctcaggagatcagttcggagcagctgaggagtgccag
ttggatgaagacgacatgttgatccccatcatcgtcggagcggctctcgcgggtctcgtc
ctcatcgtgctgctggcgtacctcatcggccggaagaggagccacgccggctaccagacc
atctga

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