Trematomus bernacchii (emerald rockcod): 117481198
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Entry
117481198 CDS
T09643
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117481198 (aff3)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117481198 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117481198
NCBI-ProteinID:
XP_033984688
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MPTVLGDKGKLSIVCFLIRCAYSQVTRSQHIICAKDILEDMTQSWTSQHALGGDQAQHIL
YNPKEAKLPTAQQRQSRGDVQLRVTHHPRVAPHKSMLVNDLKLSSDEDDTQRATHESAAP
WDGHSLSAHRAHTHGRRVRHSSSDSSGSDSSAESCSSSSSSSSLHSRSRSPDPHPDPASP
PPCNNTETDHPPAAQWQLDKWLKKSRKKSTSSDQDPSQIIPGRLPSLPNNRAPSPARSWD
TDRDYSPSQSPIPSPQFNYSHNNLSPGYSFCPSPSPFPSTCPSPSPSPGPSPIPSPVPSV
CPSPCGSTRASRSPSPIPRDPPRSPSPSLPAPSRVRHYPGVQTTQPSLTTNHHRTKSRPW
ITPLPNSDTKSKPTTSTHLHQHRPKTRPPQEQEQSNLKTSQIHSHKSRHKPNSHPSLKQI
SEAPKAKHTSHFEQTQGSRSNHKSSHKPRPSFQSSLQHSTTTAKHLAPGSRETNSGHSSH
SQSTSKAATNPTTGLNSRSNPSIKPRAKSSEAPAPVHVNQTKPTQKKAQCKDQAVEHRGD
HLSQAEGRKHERKEDRHREQKQGKQERKEDRRLAEEQLLRRPWIHSSAEEEEEEEEVIVI
ESRREERGENRRRREQQQRREWQTKHRVPTNTTQQRHQDYSHRTNKGGRSEEERELSPPP
SRSPSPHKVYSSSSSNSESESEHQAPITKVQADSTSHRKLPQRGGRSEGDRPKVVQPTAG
HPGEGGQKLYTLVPFGRSEQATAPSQRGLRNLVVHIDLCLLKRVPDSTTTSPVKKPSASS
SASSATKDKQRGAMKHLCLPEAASKDSKRKRKLENGVSHRESKRSLPHANDPSGHTEPSS
LTAERNFVTETLHNGYLEEYMDNKRPLSPLSPLSDGPETTKPPAKTKTSEQLHVHKNRDK
NRDSALKPKMEVECVKVLRQPQPPESWGPAGHRGAVPNNETPHHAEYYLHEAKRMKHRAD
AMVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKGHSGPG
ARHEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKVGYSSPKVPSTPPPSWS
DSGKGAGGPPDSLSPNSKHLSRGSNGGSAFPSHISIPQRIHQMAANHLNITNSVLYSYEY
WEVADNLAKENKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggcgacaaagggaaactttccatcgtctgttttctgatcagatgc
gcatattctcaggtaacaagaagccaacacatcatctgtgccaaagatattctggaggac
atgactcagtcctggacgtcccagcatgccttagggggagaccaggcccaacacatcctc
tacaaccctaaggaagcaaaactaccgactgcacaacaaagacaaagtcggggggatgtg
cagcttcgagtgacccatcaccctcgtgtggcacctcacaaatccatgcttgtgaatgac
ctgaagctgagcagtgatgaagatgacactcaaagggcaactcatgagtcagctgctccc
tgggacggacacagcctgtcagcacatcgagcacacacacatggcaggagggtgagacat
tccagctctgactcttcaggctcggactccagcgcagagtcgtgcagcagcagcagcagc
agcagcagccttcactcccgcagccggagcccggaccctcacccagaccctgcatcccct
ccaccctgcaacaacacagagactgatcacccccctgcggctcagtggcagttggataaa
tggctgaagaagtcccggaaaaaatccaccagcagtgaccaggatccttcccagatcatc
ccaggacgccttccttctcttcccaacaacagagccccatctccagcccggtcctgggac
accgatcgggattacagccccagccagagccctatccccagcccacagttcaactacagc
cacaacaacctcagcccgggttacagcttctgcccgagccccagtccgttccccagcacc
tgcccgagtcccagcccgagcccgggacccagtcccatccccagtccggtcccgagtgtt
tgccccagtccgtgtgggagcactagagccagtcgaagcccgagcccgataccaagagac
cctccaaggagccccagtccgagcctacctgctccttccagggtccgacactaccccggg
gttcagacgacacaacctagccttacgaccaatcaccacaggacgaaaagcaggccatgg
attaccccattgcctaacagtgacaccaagagcaagcctacaaccagcactcatcttcat
cagcaccggccaaagactcgacctccgcaggagcaagagcaaagcaatctaaagacttct
cagattcacagccacaaatctagacacaagccgaactcgcatccaagtttaaagcagatt
tccgaggctcccaaagccaaacacacgtctcattttgaacaaactcagggtagtagatcc
aaccacaaatccagccacaagcccaggccttcgtttcagtctagcttgcaacatagcacc
acaacagcaaagcacttagcccccggaagtcgtgaaaccaactctggtcacagttctcat
tcccaatctacctctaaagctgctactaatcccactactgggttaaactctagatcaaat
ccgagcataaaaccaagagccaagtcctcagaggccccagctcctgtgcatgttaaccaa
acaaaaccaacgcagaagaaagctcagtgtaaggatcaggcggtggagcacagaggagat
catttgagccaagctgaggggagaaaacacgagagaaaagaggacagacatcgggaacaa
aagcaagggaaacaggagagaaaggaagacaggaggctggcggaggagcagctactgaga
cgtccctggatccacagttcagctgaagaagaggaggaggaagaggaggtgatagtgata
gagagtaggagagaggaaagaggggaaaacaggaggaggagagagcagcaacaacgacgc
gaatggcaaaccaaacacagagtgcccacaaataccacgcaacaacgacatcaggactac
tcacacaggacaaacaagggaggaagaagtgaggaagagagggagttatcaccgcctcca
tcccgttccccatctcctcacaaagtatactcctcctcctcttccaattctgagtctgag
tctgaacatcaggctcccatcactaaagtccaagcagactccacctctcacaggaaactc
ccccagagaggaggcaggtcggagggtgacaggccgaaggtggtgcagcccaccgcaggt
cacccaggtgagggggggcagaagctctacaccctggtgccgtttgggcggagcgaacaa
gctacagcgccttcccaaagagggctgaggaacctggtggtgcacatagacctgtgtctg
ctgaaaagagtcccggacagcaccactacttccccggtgaaaaaaccctccgcctcttcc
tccgcctcttcggccactaaggacaagcagagaggggcgatgaaacacctgtgcctcccc
gaggctgcgtcgaaagacagcaaaaggaaacgcaagctggagaatggcgtgtcacacaga
gaaagcaagaggagtcttcctcatgcaaacgacccgtcaggacacacagagccttcaagt
ctcacagccgagcgcaacttcgtgactgagactttgcacaatgggtacttggaggagtac
atggacaacaagaggccgttgtctcctctgtctccgctgtccgacggccctgagaccacc
aagccccccgccaaaacaaagacttccgagcagctccatgtccacaagaacagagacaag
aatagagattctgctttaaagcccaagatggaggtggaatgtgtcaaagtgttgagacag
ccccaaccacctgagtcctggggccctgcagggcacagaggggccgtgccaaacaacgaa
actccgcaccatgctgagtactacttgcatgaagccaagaggatgaagcaccgtgccgac
gcaatggtggacaagctggggaaggctgtgaattacgtggacgccgctctgtccttcatg
gaatgtgggaaagcgatggaggaagggccgctcgaggcaaagtctccctacaccatgtac
tcagaaaccgtggagcttatcaggtacgccatgaggctgaagggccactctgggcccggg
gcgagacacgaggacaaacagctggcggtgctttgtttccgatgccttgcacttctttac
tggcaaatgtttcgtttaaagaaggaccatgcactgaaatactccaaagttctgctggac
tactttaaggtaggctatagctctcccaaagtgccttctacacccccacccagttggagt
gactctgggaagggagcaggaggaccccctgattcactctcacccaacagcaaacacctg
agccgggggtcaaacgggggcagcgccttcccctctcacatcagcatcccccagcgcatc
caccagatggcagccaaccacctgaacatcaccaacagcgtgctgtacagctacgagtac
tgggaggtggccgacaacctggcaaaggagaataaagagttcttcaactacttgaatacg
ttgtctgggcctttgactcttcacagtagcatcgctcatgcagtccaatacaccagacag
gctctgcagtggatacgcattagtgccaaacttaactga
DBGET
integrated database retrieval system
