Trematomus bernacchii (emerald rockcod): 117481220
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Entry
117481220 CDS
T09643
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117481220
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117481220
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117481220
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Others
117481220
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
Glypican
DUF5856
Serglycin
Fz
Motif
Other DBs
NCBI-GeneID:
117481220
NCBI-ProteinID:
XP_033984719
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MLRLGTIICTFSVLAIAARADFKARNCSEVREACIGKGFSFAHVPLQEIPGEHLRVCPQG
NTCCTQEMEDTFGQQSKQDFENLVDEISHELRSTFVSRHKRFDEFFLELLENTERSLNEM
FVRTYGKPYMQNSEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVAQRVSKVSSTPA
CIRALTKMLYCPFCQGMPAVKPCKNYCLNVMKGCLANQADLDPEWNLYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQENSAQVSFRVFQGCGQPKPAGMTRSTRGVSDVFSAR
FRPYSPEERPTTAAGTSLDRLVVDIKEKLKLSKKCWSNLPEAMCSEDRVTAGNASDEDCW
NGHTKGRYFPEVQKDGLTNQVNNPEVAVDITRPDTLIRQQIMALRVMTNKLKNAYNGNDI
YFQDSSDEGSGSGSGSGCTEACPTEAGGAASEAPVVEADRRGPVDDSAPLRAPSVALPTI
LALSALALHQLWR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctcagactagggaccatcatttgcactttttctgtgctggctattgcagcaagagca
gattttaaggcacggaactgcagcgaggtgagggaggcttgtatcgggaaaggcttcagt
ttcgcacatgttcctcttcaggagatcccaggtgaacatctccgtgtatgtcctcaggga
aacacatgttgcacccaggaaatggaggacacatttggccaacagagcaaacaggacttt
gagaatcttgttgatgaaattagtcatgaattgagaagcacctttgtttccagacataaa
agatttgacgaattcttcctggagctactggaaaacacggagaggtccctgaatgagatg
tttgtgaggacttatggcaagccttacatgcagaactcagaggtctttgagaacctgttt
gcagagctgaagcgctattacacaggaggaaatgttaacctggaggaaatgcttaatgac
ttttggtcgcggctactggagcgtatgttcacgctgctcaactcccagtacgtcatcact
gaggactatctggagtgtatcagtaagtacaccgaccagctcaagccctttggagacgtg
cccaggaaactcaaggctcaggttacccgggcattcatcgctgcacgcacatttgtccaa
gggctctctgttggccgggaggtggcccagagagtgtctaaggtaagcagcactccagca
tgtattcgggctctgaccaagatgctgtactgccccttttgtcagggcatgccggcagtt
aaaccctgtaagaactactgcctgaatgtcatgaagggctgcctggccaatcaggctgat
ctggatccagagtggaatctgtacatcgatgccatgctgctggtggcacagaggctggag
ggacctttcaacattgaatctgtcatggagcctattgatgtcaagatttcagaggccatc
atgaatatgcaagagaacagtgcccaggtctccttcagggtttttcaaggctgtggccag
cccaaacccgcaggaatgactaggtctacccgcggtgtttcggatgtgttcagcgctcgc
ttcaggccctacagcccagaggagcgccccaccactgcagctggcacaagcttagacaga
ctggtggtcgacataaaagagaaactgaagctgtcaaagaaatgttggtccaacctgccc
gaggcgatgtgttcggaggacagagtgaccgctggaaatgccagcgatgaggactgctgg
aatggacacaccaagggcaggtactttcctgaagtccaaaaggatggactcaccaaccag
gtgaataaccctgaggtggctgtggacatcacccgccctgacaccctaatccgccagcag
atcatggctctcagggtgatgaccaacaagttgaaaaatgcctacaacggcaatgatatc
tactttcaagactcaagtgatgaaggcagcggctcaggcagtggcagcggctgcacagaa
gcctgccccacagaggcgggcggtgctgcctcagaggccccggtggtggaagctgatcgg
cgcgggccagtggacgactctgccccgctccgagctccctctgtagcgctgccaaccatt
ctggccctctcagccctggcactccaccagctatggagataa
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