Trematomus bernacchii (emerald rockcod): 117481301
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Entry
117481301 CDS
T09643
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117481301 (impg2a)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117481301 (impg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
117481301
NCBI-ProteinID:
XP_033984828
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MTGKQKYLLGGVVVDYAVTVVVDRSGVSLEQLDYLTLQSNRVENSYREVMELPTVVYAIS
EVKDIITDALHNNELDTVSEVPADGDTNTAADEPPEVAILEEDVEDVEDVDKVGVLPDVF
ETNRVENNENDIIILEESVVVSPDSVNTDSELEADSIAEEGLLLGDIVQTPAVETPAAEE
LPAELPAELPAELPAEFPAELPAELPAELPAELPAELPAELPAELSEVTLHEPPVDEEAS
GVGTDNLNNLLEPPTTTEEEDVESLEEADPEHGLTTEEEEEGPSVLVSPPETEEEASEAP
EPLAEETGEESVEEPEEQPEEQPEEQPEEEHAEEEDNTVVLTIPEEPVAEEGGVEEATEN
EVEEAAPEAPPVEEEGPAAPELSTEDLTEDEILLVNVDEPEPLVTDSLNPVQPTALSPEK
ESPFTRISDIDTALEEQPDIIIPSLVEIQTTDGGLEGATNGDSDYEVVHYGYELINHTEE
GSTGFPFGAHGTDQVSIAMPVNPGRALMVFFSLRVTNMIFSEDLFNKKSPEYKALEQRFI
ELLVPYLQSNLSNFENLEILNFRNGSIVVNSRMKFGKPVPETVTTTVYLILEDFCNTAYQ
TMNLAIDKYSLDVESGDKADPCKFQACNEYAGCKVNKWTGEAECVCNAGYFSVDSLPCQS
ICDLQTNFCLNDGKCDIIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGF
LLVASGVIFFLARTLRDQYDKDESEDPIRRAESVPSLERATKYNPMYESEATTGYSHYYR
RYPEAAVYSSASAEASTDFSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFADFVRH
HQAVVDTRRESSSAHT
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgacggggaagcagaagtacttactgggcggtgtggtggtggactacgctgtcacagtg
gtggtggatagatcaggagtgagcttggaacaactggactacctgacgctgcaatccaac
cgggtggagaactcgtaccgtgaagtcatggagctccccactgtggtgtacgccatcagc
gaggtcaaagacatcatcactgacgccctgcataacaacgagctggacactgtgtctgag
gtccctgcagatggagacacgaatactgctgccgatgagccaccagaggtcgcgatccta
gaagaggacgtagaggacgtagaggatgtcgacaaagttggcgtcctgcctgacgtcttc
gaaaccaacagagtggagaacaacgaaaatgacatcattatcctggaggagagtgtagtt
gtgtctcctgattctgtcaatacagatagtgaacttgaagctgatagcattgcagaggag
ggtctgttactcggggacattgtgcagactcctgcagtagaaacccccgccgcagaggag
ctcccagctgagctcccagctgagctcccagccgagctcccagccgagttcccagccgag
ctcccagccgagctcccagccgagctcccagccgagctcccagccgagctcccagccgag
ctcccagccgagctgtcagaggttacacttcatgaacccccagtggatgaagaggcctct
ggagtgggcacagacaacctaaataacctgctcgagccacctacaaccacagaagaagaa
gacgtagagtctcttgaggaggctgacccagaacatgggctgaccacagaggaagaagaa
gaaggcccgtctgtcctggtctcacctcctgagactgaagaggaagcgagtgaagcacca
gaaccgttggcagaagaaacaggtgaagaatcggtggaagaaccagaagaacaaccagaa
gaacaaccagaagaacaaccagaagaagaacatgcagaagaggaagacaatactgtggtg
ctgaccattcctgaggaacctgtggctgaagaaggtggcgtggaggaagcaacagagaac
gaggtagaagaggctgcacctgaagctcctcctgtggaggaagagggcccggcagctcca
gagctctccacagaggatctgacagaggatgagatcctactggtcaacgttgatgaacca
gaaccactagtgacggactctctgaacccggtccaacccactgccctgtccccagagaag
gagtcgcccttcacccgcatctctgatattgacaccgccctggaggaacaacctgacatc
atcatcccttcactggtggagatccagaccactgacggaggcttggaaggtgccactaat
ggagacagcgactatgaagtggtccattatggttatgagttgattaaccacacagaggag
ggcagcactggctttccgtttggtgcacacggcacagaccaagtcagtatcgccatgcct
gtgaaccccggacgagcactgatggtgttcttcagcctgagggtgaccaacatgatcttc
tcagaggatctctttaataagaaatccccagaatacaaagctttggagcaacgattcata
gagctgcttgtgccctacctgcagtccaacctgagtaactttgagaacctggagatcctg
aacttcaggaacgggagcatcgtggtcaacagccggatgaaattcggaaaacctgttcca
gaaaccgtcaccaccaccgtctatctgatcctggaggacttctgcaacacagcctaccag
accatgaacctggccatcgataagtactcactggacgtagagtcaggtgataaagccgac
ccctgtaagttccaggcgtgtaacgagtacgctgggtgtaaggtgaacaagtggacgggg
gaggcagagtgtgtctgtaacgcaggatacttcagcgtggacagcctgccctgtcagagc
atctgtgacctgcagactaacttctgcctcaatgatggcaagtgtgacatcatccccggc
cagggagcaatctgcaggtgtcgtgtcggggagaactggtggtacagaggagagcactgt
gaggagtacgtgtctgagccgctggtggtcggcatagcgattgcctccgtagctggattc
ctattggtggcgtccggagtcatcttcttcctcgccaggacgttacgggatcagtacgac
aaggatgagtcggaggatcccatacggcgagcagagagtgtcccgtctctcgagagggcg
actaagtacaaccccatgtacgagagcgaggccaccacaggctacagccactactaccgc
cgctatcctgaagctgcggtgtacagcagtgccagcgctgaggcctccactgacttcagc
agcgaggagatacgacacatctacgagaacagtgaactgaccaaggaggaaatccaagac
aggatacgcatcattgagctctacgcaaaggaccgacagtttgcagactttgtacggcat
catcaagctgttgtggacacacgcagagagagctcctctgcacacacatga
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