Trematomus bernacchii (emerald rockcod): 117481325
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Entry
117481325 CDS
T09643
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117481325 (pcdh8)
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117481325 (pcdh8)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
DUF6680
Motif
Other DBs
NCBI-GeneID:
117481325
NCBI-ProteinID:
XP_033984864
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MGFCKIAGVRVCIVLSLFVYSVRCTTTRYFTYEEDAPGTDIGNLSQDLKIDPAEDSDTSF
RFMQENNSSVIEMREIDGLLSVAEIIDREQLCPRSPRCFISFDVVAFSKEKFQLIHVEIE
VKDINDHSPHFTRNETQLEIVENVPLDSRFPLQVALDQDVGENYIQSYNISASNHFAIEV
RDGDDGVKFAELVLVRELDREVEDFYTIEVTATDGGVPSKSGSMIVNIRVLDFNDNSPTF
EHSSLKVELYEDSPVGHRVLKVHAFDPDHGVNGEVTYAFADVLSPETGRLFHVDPYSGDV
TLKAVVDYEKRKSYELNIKASDSGANSVPSSCKVVIDIVDVNDNAPDISIKPMTSSSDGV
AYITEAAAAESFVALISTSDRDSGSNGYVHISLIGHEHFTLQQAYGDSFMIITSTTLDRE
KIPEYNLTVIAEDLGSPPFKTVRQYTIRVTDENDNPPLFSKSLFEVSVLENNIPGSYVTT
VVARDLDVGKNAKVSYKLIDSEVPGGAPVSTYVSVDSLSGSLYTLRSFDFETLQQIELVI
QAEDRGSPSLSSTSTIRIKVVDLNDNCPYFTFPVLMNDSADIPLPFNAPAGYLALRVSAE
DEDEGVNGELHYQIVQGDPHIFTMNKDTGEIALKQWLTSEIGDVLEMKIAVSDNGRSPLS
SSATIRFIVSDTQPSEDQVVIVLRSSDEEGTGFDGSLIVIIMLSGGCALLLIAIVAVVVT
CKLSDGGRNRGSKREVCHSMFDSRPMPMIGSTEPNIYTGPRGFFHERTSSSLDDSCLYEE
RSGDSETKMFLPSKHFQPTSVWQGDKYCLQVSGIGNSDQQSVKDSGKGDSDFNDSDSDIS
GDGGKKNFSTFQPKLKSSSSTAHSLSGECQSTYGVLPPQSFRGSGDNAYTIGFAPAPVFN
NLHGYPNFWKDSGYGTNRPKSRNSMQTFSTGTLPCYFPQQHREASVRGTEIQNQSPHFVT
VATTLEVATIF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgcaagattgcaggagttagagtgtgcattgtgctttctttatttgtatac
tctgttcggtgtacaactacaagatatttcacctatgaagaggatgcacccgggacggat
ataggaaatctatcccaagatttaaagattgatccagctgaagactccgacacatcgttc
cgcttcatgcaggaaaacaactcctctgtgattgaaatgagggagatcgacggacttctg
agtgtggcagaaataattgacagagagcagctctgcccgaggtctccgcgctgcttcatc
agcttcgacgttgtggccttctccaaagaaaagtttcaactcatccacgtggaaatcgag
gtgaaagacatcaacgaccactctcctcattttacgcgcaacgagacacagctggagata
gtggagaatgtgcctctggactcaaggttcccactgcaggttgccctcgaccaggacgtg
ggtgaaaactacatccaaagctacaacatttccgcttctaatcatttcgccattgaagtg
cgcgatggggatgatggagtgaagtttgctgagctggtgctggtgagggagctcgaccgg
gaggtggaggacttctacaccatcgaagtgactgcaactgacggaggggtgccttcaaag
tccgggtctatgattgtaaacatcagggtgctggactttaacgacaacagccccacgttt
gaacacagctcgctgaaagttgagttgtatgaagactccccggtgggtcaccgagttctc
aaagtgcacgcttttgaccccgaccacggtgttaacggtgaggtgacgtacgcgtttgct
gacgtgctgtcacctgagactggacgccttttccacgtcgacccttattccggggacgtg
actttgaaggcggtggttgattatgagaaaaggaagtcatacgagctgaatatcaaagcc
tcagattcgggcgcaaactctgtcccgtccagctgcaaagttgtgattgacatcgtggac
gtgaatgacaacgcacctgacatcagcatcaaaccgatgacttccagcagtgatggagtc
gcctacattacagaggctgcagctgcagagagcttcgttgctctgataagcacctcggac
agagactctggctccaacgggtacgtgcacatcagcctgatcgggcacgagcatttcacc
ctgcagcaggcatatggggactctttcatgataattaccagcactactttagacagagag
aagatcccagagtataacctgactgtgattgctgaggatctgggaagcccacccttcaaa
actgtcagacagtacaccatccgtgtaacagatgagaatgacaacccccctctgttcagt
aagtcactttttgaagtttcagtcctggaaaataacatcccaggttcatatgttacaact
gttgtcgctcgagatcttgatgtgggaaagaatgccaaagtctcatacaaactcatagat
tcagaggtgccaggaggagctccagtgtccacttatgtttctgtggattccctctccggg
tctttgtacactttgaggtcttttgattttgaaactctacagcagattgagctggtcatc
caagctgaagacagaggttccccctctctttcaagcacatcgacaatcagaataaaagtt
gtggatctgaatgacaattgtccttacttcaccttccccgtccttatgaacgactctgct
gatatccctctgccttttaatgcacctgctggctaccttgcccttcgcgtctcagctgaa
gatgaggacgagggagtgaatggcgagctccactaccaaattgtacaaggtgacccacat
atttttacaatgaacaaagacactggagaaattgctttgaaacaatggctgacgtctgaa
attggagacgtgctggaaatgaaaatcgctgtgagtgacaatggcaggtccccgctctct
agcagtgccaccattaggtttattgtctcagacacacagccctctgaagaccaagttgtc
attgtgttgcggtcaagtgatgaagaaggcactggctttgatggctcgctaattgtcatc
attatgctcagcggtggttgtgcattgttgctgattgcaatagtggctgttgttgtgaca
tgcaaactcagtgatggggggagaaatcgaggctccaagagagaagtgtgtcacagcatg
ttcgacagcaggcccatgcccatgatcggctcaacagaacccaacatttacaccggacca
agaggtttcttccacgagagaacctcttcatctctggatgattcctgcctgtatgaggag
agaagtggggactctgaaacaaagatgttcctgccctccaagcatttccaaccaacatct
gtgtggcaaggtgacaaatactgcttgcaagtgagtggcattggcaacagcgaccagcag
agcgtgaaggacagcggcaaaggggacagtgactttaacgacagtgactctgatatcagt
ggtgacggagggaaaaagaacttcagtaccttccaaccaaagctaaaaagttcatccagc
actgctcacagcttgtctggggagtgccagagcacgtacggtgtattaccaccacagagc
tttagaggatccggagataatgcatacacaataggcttcgccccagcaccagtgttcaac
aatcttcacggctatcccaacttttggaaggactctggttatggaacaaatcgcccaaaa
tccagaaacagcatgcagaccttctctaccgggacccttccttgttatttccctcagcag
catcgtgaggcaagtgttcgaggaactgaaatccaaaaccagagtccacattttgtaacc
gtggctacgaccctcgaggttgcaaccatcttttaa
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