KEGG   Trematomus bernacchii (emerald rockcod): 117481360
Entry
117481360         CDS       T09643                                 
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
  KO
K11800  DDB1- and CUL4-associated factor 5
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117481360 (dcaf5)
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117481360 (dcaf5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 Beta-prop_RIG_2nd EIF3I Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_SPT8 HC2 Extensin_1 New_glue WD40_RFWD3
Other DBs
NCBI-GeneID: 117481360
NCBI-ProteinID: XP_033984908
LinkDB
Position
Unknown
AA seq 877 aa
MMKELQGCGMRSSVGFLSRRELTGQPLLKDEFQRRRMAGCSSLFKKDMLGHFGCVNAIEF
SNNGGEWLVSGGDDRRVLLWNMEEALHARSKPVKLKGEHLSNIFCLAFDSTNRKVFSGGN
DEQVILHDVERMETINVFLHIDAVYSLSVSPVNDNVFASSSDDGRVLIWDTREPPSTEPF
CLASYPSAFHSVMFNPVEPRLIATANSKEGVGLWDIRKPRSSLLRYGGSMSLQSAMSVRF
NSSGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDD
FNLYMWKIPKDPEAWGAGRVVNGAFMILKGHRSIVNQVRFNPHTYMICSSGVEKVIKAWS
PYQQPESLGDLEGRVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSIQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSEEAIMQLHARGRRTTTRTTPTLPLTLPPPAAAAAVAAAPHSD
SENSSSSSLVTEDRLRRRRRRRRRNQSQVSGFLVNEDSDSEFWLDPMPRPRSPSPQENSA
LSSAASSSSSPSLPTAVAAASSSSSSSSSSSSSSEDEQRRSAVRRRNVMRRRRMNVVSRA
EDRPDPTPLFSAVDSCNYPCISVDDFTSSSSGEVQKPREEEEEEEEEEEELSPSDFVCLS
PEEAGHRTGDKGGCEGGEAGSSSFTLDSLSRGTKGRHRTAAPPPQREEVQREEVQREEVQ
RERVQRERVQREEVQRETVQREEVQRETVQRERVQREEVQRETVQRETVQRERVQREEVQ
RERVQREEVQRERVQREEVQRETVQRETVQREEVQREGVQREEVQREGVLRKEVLRENLL
TSSDSEEDPRPPRGSALKRTRVASDDGGSPSEKRCKT
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgatgaaggagctgcagggctgcgggatgcggtcctcggtgggctttctgtcccgcaga
gagctcaccggacagccgctactgaaggacgagttccagaggcggaggatggccggttgc
tccagcctcttcaagaaggacatgctcggtcacttcggatgcgtcaacgccattgagttc
tccaacaacggaggagaatggctggtttctggaggagacgaccgtcgggttctgctgtgg
aacatggaggaagctctccacgctcgctccaaaccagtgaagctgaagggagaacatctg
tccaacatcttctgcctcgccttcgacagcaccaacaggaaggtcttctccggaggaaat
gatgaacaggtgattcttcacgatgtggaaagaatggaaaccattaacgtgttcttgcac
atcgacgctgtgtacagtctgtccgtcagcccggtgaacgacaacgtgttcgccagctct
tctgacgacggacgagtcctgatctgggacacccgcgagccgccaagtacagagccgttc
tgcctggccagctacccctcagcgttccacagcgtgatgtttaacccggtggagccgagg
ctcatcgccaccgccaactccaaggagggcgtgggattatgggacatccgaaaacctcgc
agctcgttgctgcgttacggcggcagcatgtctctgcagagcgccatgagcgtccgcttc
aacagctcgggcactcagctcctcgctctgaggcgccgcctgccgcccgtcctctacgag
ctgcactcacgcctgcccagcttccagttcgacaaccagggatacttcaactcctgcacc
atgaagagctgctgcttcgctggggaccgcgaccagtacatcttgtctggctccgacgac
ttcaacctctacatgtggaaaatcccaaaggacccagaagcctggggcgcaggccgggtg
gtaaacggtgcgttcatgatcctgaagggccatcggtccatcgtgaaccaggtgcgcttc
aaccctcacacctacatgatctgctcctctggcgtggagaaagtcatcaaggcgtggagt
ccgtaccagcagccggagagtctgggggatctggagggccgggtggaggataagtcccgc
agcctgtacactcacgaggagtacatctccctggtgctgaactccggctccgggctctcc
cacgactacgtgagccagtcgatccaggaggacccgcgcatgatggccttcttcgactcg
ctggtgcgccgcgagatcgagggctggagctccgactcggactcggacctgagcgaggag
gccatcatgcagctgcacgcccgtggacgaagaaccaccaccagaaccacaccaacactt
cctcttactcttcctcctccggctgctgctgctgctgttgctgctgctcctcacagcgac
tcagagaactcctcctcttcctcactggttacggaggatcgtctgaggaggagaagaagg
aggagaaggagaaaccagagccaagtttcggggttccttgtgaacgaggattcggactct
gagttctggttggacccgatgccgcgtcctcgctcccctagcccccaagaaaactctgcg
ctctccagtgccgcctcctcctcctcctcgccgtcgctccctaccgccgtcgccgctgct
tcctcttcctcttcctcctcttcctcctccagctccagcagcgaggatgagcagcgtcgc
agcgcggtgaggaggaggaacgtgatgcggcgccgacgcatgaacgtggtctccagagcc
gaagatcgacccgatccgacgccgctgttctccgccgtcgactcctgcaactacccgtgc
atatctgtggacgatttcacctcctcttcatctggggaggtgcagaaacccagagaggaa
gaggaggaggaagaggaggaggaggaggagctgagtccgtctgactttgtgtgtctgagc
ccggaggaggctggacaccggactggagataaagggggatgtgagggaggggaggcgggc
agcagctccttcactttggactccttgagccgtgggactaaagggcgccaccggactgca
gctcctcccccccagagagaggaggtccagagagaggaggtccagagagaggaggtccag
agagagagggtccagagagagagggtccagagagaggaggtccagagagagacggtccag
agagaggaggtccagagagagacggtccagagagagagggtccagagagaggaggtccag
agagagacggtccagagagagacggtccagagagagagggtccagagagaggaggtccag
agagagagggtccagagagaggaggtccagagagagagggtccagagagaggaggtccag
agagagacggtccagagagagacggtccagagagaggaggtccagagagagggggtccag
agagaggaggtccagagagagggggtcctgagaaaggaggtcttgagagagaacctcctc
acctcctcggactcagaggaggacccccggcccccgagggggagcgctctgaaacggact
cgtgtcgcgtcagacgacggaggctctccttcagagaaaagatgtaaaacataa

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