Trematomus bernacchii (emerald rockcod): 117481442
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Entry
117481442 CDS
T09643
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117481442
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117481442
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117481442
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117481442
Peptidases and inhibitors [BR:
tben01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117481442
Proteoglycans [BR:
tben00535
]
Cell surface proteoglycans
Others
117481442
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Others
117481442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
HrpE
Motif
Other DBs
NCBI-GeneID:
117481442
NCBI-ProteinID:
XP_033985015
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MGEFTAFLLLLVATLTLSSEVPADDSVDMQTEPQVAMFCGKLNMHINVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPISIEDWCKKGRKQCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAEREADSAELEGEESDVWWGGAETEYSDNSMTRPAETEPATTEDDEDED
EETETFERDENGDGDEDDDEDDDEDDVIDERDSDERSANIAMTTTTTTTTESVEEVVRAV
CWARAESGPCHAMLERWYFLPEKGSCARFLFGGCGGNRNNFDSEEYCLAVCSNSLPTMAP
SPPDAVNHYLEAPGDDNEHSDFQKAKESLEAKHREKMSQVMREWEEAERQAKKLPRADKK
AVIQHFQEKVEALEREAAGERQQLVETHMARVEALLNSHRRLALENYLSSLQANPPRARQ
VLTLLKKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIDERMNQSVGLLF
KVPSVANELQSQVSVLMQRVQAELSQQVSSLQSDGRVDGRVSYGNDALMPDQAYSSAPME
PGLDGLGFVHPESFNQVNTENHVEPVDARPIPDRGHPTRPVSPLKPEEMPKVRINTDERQ
SAGYEVNPQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIE
VDAAVTPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcacggcgtttttgctgttactggtggcgaccttgacgctttcatccgag
gtgcctgctgatgactctgtggatatgcaaaccgagccccaggtggctatgttctgcggg
aagctcaacatgcacattaatgtgcagagtggaaaatgggagtctgacccttcaggcacc
aagagctgcatcggcaccaaggagggcatcctgcagtactgccaagaggtgtacccagag
ttgcagattacaaatgttgtagaggccaaccagcctatcagcatcgaggactggtgcaag
aaaggccgcaagcaatgccgcagtcacacccacatcgtggttccctaccgctgcctggtt
ggagagtttgtgagcgatgctctgctggttcctgacaagtgtaagttcctgcaccaggag
cgtatggaccagtgtgagagccacctgcactggcacactgttgccaaagagtcctgtgga
gaccgctcaatgaatctccatgactacgggatgcttttgccatgtggtattgaccgtttc
cgaggggtggagtttgtctgctgtccggcggaggcggagcgagaggccgacagtgctgag
ctggaaggggaggagtcagacgtctggtggggcggagctgagaccgaatactcagataac
agcatgactcgcccggcagagacagagccagccacaactgaagacgatgaagacgaggat
gaagagacagaaacatttgaaagggatgagaatggagatggcgatgaagatgatgatgag
gacgacgatgaggacgatgtcatcgacgaaagggatagtgatgagcgcagtgctaacatc
gccatgacaaccaccaccaccaccaccactgaatccgttgaggaagttgtccgagccgtg
tgttgggctcgtgctgagtccggcccgtgtcatgccatgctggagcgttggtacttcctg
cctgagaagggcagctgtgctcgcttcttgtttgggggctgtgggggcaacaggaataac
tttgactcagaggagtactgcctagcggtctgcagcaactcgttgcccaccatggccccc
agtcctcccgacgcagtcaaccactaccttgaagcacccggagacgacaacgaacactct
gacttccagaaggccaaggaaagcctggaggccaaacaccgtgaaaagatgtcccaggtg
atgagagagtgggaagaggctgagaggcaggccaagaaacttccccgtgctgacaagaaa
gctgtcatccagcacttccaggaaaaggtggaggctctggagcgggaggcagctggagag
aggcagcagctggtggagacccacatggcccgggtggaggctctgctcaacagccacaga
cgcctggctctggaaaattacctcagctccctgcaggccaaccctccacgggctcgtcag
gtgttgaccctgctgaagaagtacgtccgtgccgagcagaaggacaggcagcacacgctg
aaacattacgagcatgtccgcacagtcgatcccaagaaagctgcacagatccggcctcag
gttttgacccacctacgtgtgatcgatgaaaggatgaatcagtccgtcggtctgctcttc
aaagtgcccagtgtggcgaacgagctccagagccaagtctctgttctgatgcagagagtc
caggcagagctgtctcagcaagtttcctctctgcagagcgatgggcgggtggacggcagg
gtgagctacgggaacgacgccctgatgccagaccaggcctacagctctgcccccatggag
cccggcctggacggactgggcttcgtccaccctgagagcttcaaccaggtcaacacagaa
aaccacgttgagcctgttgatgctcgtccaattccagatagaggacaccctacacgacct
gtatcacccctgaagccagaggagatgccaaaagtgcggataaatactgacgagaggcaa
agtgctggatatgaagtcaaccctcagaaactggtgtttttcgctgaggatgttggatcc
aataagggggccattattggacttatggttggaggggttgtcatagcaaccgtcatcgtc
atcaccttggtgatgctgagaaagaaacagtatacttctattcatcacggtgtgatcgag
gtcgatgcagcggtgactccagaggagcgtcacctggccaagatgcagcagaacggctac
gaaaaccccacctacaaattctttgaacagatgcagaactaa
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