Trematomus bernacchii (emerald rockcod): 117481454
Help
Entry
117481454 CDS
T09643
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117481454 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117481454 (u2af1)
Spliceosome [BR:
tben03041
]
Complex A
U2 snRNP components
U2 related factors
117481454 (u2af1)
Complex B
117481454 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117481454
NCBI-ProteinID:
XP_033985033
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSQSRERRSRSRDRGRGGGGGGAGGGGGGGGGGGGGGGGGGGGG
GGRDRERRRSRDRERSGRF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatacttggcgtccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaattggtgcctgccgacatggcgaccgctgctccagattacacaataaacca
acattcagccagacaattgccctcctgaacatttacaggaaccctcagaacagtgcccag
tctgctgatggcctcacctgtgccatcagtgacatggagatgcaggagcactatgatgag
ttttttgaggaggtcttcacagagatggaggaaaagtatggagaggtggaggagatgaac
gtgtgtgacaacctcggtgaccacctagttggaaatgtgtatgtcaagttccgttatgaa
gaagatgcggagaaggctgtgatagacctgaataatcggtggtttaatggacagcccatc
catgctgagctgtctcccgtaacagacttcagagaagcctgttgtcgccaatacgagatg
ggggaatgtactcgtggtggcttctgtaacttcatgcatctgaagcccatctcacgtgaa
ctcaggagggagctctatggtcgtcggaggaagggccgccataggtcccggtctcaatcg
agagagaggcgatctcgctcaagggacagaggtcgaggaggaggaggaggtggagctggt
ggaggaggaggaggtggtggtggtggtggtggaggaggaggaggaggcggaggaggagga
ggtggccgtgaccgcgagagacgtcgctctagagacagagagcgttcaggacgattctga
DBGET
integrated database retrieval system
