Trematomus bernacchii (emerald rockcod): 117481492
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Entry
117481492 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117481492
03036 Chromosome and associated proteins [BR:
tben03036
]
117481492
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117481492
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117481492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
CFAP43_N
WD40_CDC20-Fz
BBS2_Mid
Beta-prop_EML_2
DUF7675
SprB
Motif
Other DBs
NCBI-GeneID:
117481492
NCBI-ProteinID:
XP_033985082
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MTSPRPSESAADVAPGKEEDEDEEEQGEEFEFDDSDDRGPPERQRDWPSGHSASLLHCSG
DMAVRKSPEGCSTSSDVAATGEPENFWKANSVYEGKSSIMTGGGNEDAAEEQVLSSANPH
TEHHTAGGRPPHSVLRHPQAIYDDVPAEHKQHPVGDVDDIYEDIQRTDQCGSSGWSSSEF
ESYDELSDSEAAPAHSSKLTADVQRLKETRGSTKREGGGRLSTPQVAHTRQSCDTKVQQL
MKAAKNGTMDGLEKTKLAMFRKVSFLQRKDSTGEGKDDAGYVDVSVCEIKHPPAQLSPTP
EGLSSQQVVRRLILSSIVQSECSYLDSLKRILQEYQQPLLEPQNLVLNPKKVRQIFYRLQ
EIHQCHSMFQIALASRVAEWDHSEKIGDLFVASFSKSMVLNVYSEYINNLTNAMALIKKA
CMSKPSFLDFLKKKQASSPDRITLYGLMVRPIQRFPQFILLLQDMLKNTPQWHVDRLPLQ
LALTELETLAEKLNEQKRLSEQEAELQLLAHSGGDRTLSKLLRAGGRQLLHCELLTERVY
GDKGQVLKSKERKLFLLNDTLICANLNLKGPSDISSLVPVGPKYTVKWCCPLLHTQVVEV
GQDSVLTARCPSSGSSYMGKVFLGPPRLYQELEQLQHDLAVVEEVSLLVATLHGPYQNLN
SLVSQDWSLALQRLVRLKEEEIQNANRCRLRLSVPGKPDRCGRPVSIILVFNTPSPLSKI
SWVNRMHLAKIAQRQENTPGWECDEEDGKTKAAFSCPLLTCRLPVFSSRTHTLKAALHSP
ARCSLLGSCSSSTSLPQGYLWVAGGGGGLDHGQVEIFSLNRASPRLVKSVPLMSPVLCLE
YVKEPCPSPEEAPTAAATENIICVGAPPAAATENIICVGAPPAAPTENIICVGLQDGSVS
VYSSVDTAVQWLLTLITPDRSPVLCLTHTPDLLLAGLANGRVAVYRRNRGERLWDVDSCR
LLSLGGPPVCTLLTLEDTVWASCANQVSVIQGTSLHTQSFRAHSDPGRSVSHMTRSGGGV
WMAFTQGSSIHLFHTETLEHLQEVNISTRTAHLTTGEMCVSSLLICQGLLWVGTSQGVIL
TFPVPTLEGIPKITGKGMMSLNAHCGPVDVLVATSSTLASDLLRRNSILNGCEEGVNGEG
GQRLDQGSSSKDAEAPSPREKPSLLLQYRLHSTRQLPGRLLTAQPDQGNPQPLPDSPEHS
PEDGSIYEVSEDPDVWVRGRPMERGKEGEARRGKVTSTAVFSGGRGSRRMGPGAPPCSDT
ENTLLLWQLPLTLGQ
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccacgtccctctgagtctgcagctgatgtggctccaggcaaagaggaagat
gaggatgaagaggagcagggggaggagtttgagtttgatgacagcgatgacaggggccct
cctgagaggcagagggactggccctcaggccacagcgcctcactgctacactgctcagga
gacatggcggtcaggaagtcaccagagggatgttccacctcctcggatgtggcagcgaca
ggagagccggagaatttctggaaagcaaacagtgtttatgaaggaaagtcttctataatg
acaggagggggtaatgaggacgctgctgaggaacaggtgttgtcttcagccaatcctcac
actgagcaccacactgcagggggccgccccccccacagtgtgctcagacacccacaggcc
atctatgatgatgtgcctgctgaacataaacagcacccagtgggagatgttgatgacatc
tacgaggacatccagagaacggatcagtgcggctccagcggctggagctccagtgaattt
gagagttatgatgagctttcagacagcgaggctgctccggcacacagcagcaagctgact
gctgatgtgcagaggctgaaggagacccgtggttccaccaagagggagggaggggggcgt
ctcagtactcctcaagttgcccacaccagacagagctgtgacactaaggtgcagcagctg
atgaaagcagcgaaaaatggtaccatggacgggttagagaagacaaagttagccatgttt
cgtaaagtgtccttcctgcagagaaaagattccacaggcgagggaaaggatgatgcaggt
tacgtagatgtgtctgtgtgtgagataaagcaccccccagcacagctgtcccccacgcca
gagggactcagcagtcagcaggttgtcagacgtctcatcctcagctccatcgtccagagt
gagtgcagctacctggactctctgaagagaattctacaggagtaccagcagcctttgttg
gagccacagaacttggtcctaaaccccaagaaggttcgtcaaatcttttaccgtctgcag
gagatccatcagtgccactccatgttccaaattgccctggcatcccgagtggccgagtgg
gatcacagcgagaagatcggagacctgttcgtggcctcgttttccaagtccatggtgctg
aacgtgtacagtgagtacatcaacaacttaaccaacgccatggctctcatcaagaaggcc
tgcatgtctaaaccttctttcctggacttcctgaagaagaagcaggcctccagtccagac
aggatcactctgtacggcctgatggtccgacccatccagcgcttccctcagttcatcctg
ctgctgcaggacatgttgaagaacaccccccagtggcacgtggaccggctaccgctgcag
ctggctctcaccgagctggagactctggccgagaagctgaacgagcagaagcgcctgtct
gagcaggaggcggagctccagctgctcgctcacagcgggggcgaccgcaccctcagcaag
ctgctgcgggcaggggggaggcagctgctgcactgcgaactgctcactgagagggtgtac
ggagacaaagggcaagtcctcaagtccaaagagaggaagctgttcctgctcaacgacacc
ctgatctgtgccaacctcaacctgaaggggccctcggacatcagcagcctggttcctgtt
ggtcctaaatacacggtgaagtggtgctgtcccctgctgcacacccaggtggtggaggtg
ggacaggacagtgtcctcacagccagatgccccagctccggctccagctacatggggaaa
gtgttcctgggccccccccgactgtaccaggagctggagcagctgcagcacgacctggct
gtggtggaggaggtgtccctgctggtggctacgctccatggaccctaccagaatctcaac
agcctggtgtctcaggactggagtctggctctgcagaggctggtgcgtctgaaggaggag
gagatccagaacgccaacaggtgccgcctgcggctgtctgtccccgggaagcctgacagg
tgtggtcgtccagtgagcatcattctggtcttcaacacccccagccccctcagtaagatc
tcttgggtcaaccggatgcacctcgccaagatagctcagagacaggagaacactccgggc
tgggaatgtgatgaagaagatgggaagacgaaggctgcattcagctgtccactgctgacc
tgcagacttcctgtcttctcctccagaacacacacactgaaggcagctctccacagcccg
gctcggtgcagcctgctgggctcctgctcctccagcacctccttacctcagggttacctc
tgggttgcgggtggaggaggcggcttggaccacggccaggtggagatcttctccctgaac
cgcgcgtctcctcgcctggttaagagcgtcccgctgatgtccccggtcctctgcctggag
tacgtgaaggagccatgtcccagcccagaggaggcccccactgcagccgccacagagaac
atcatctgtgtgggggccccccctgcagccgccacagagaacatcatctgtgtgggggcc
ccccctgcagcccccacagagaacatcatctgtgtgggcctacaggacggcagcgtctct
gtgtacagcagcgtggacacagcggtgcagtggctgctgaccttaatcaccccagaccgc
agtcccgtcctctgcctcacacacacgccggatctcctcctcgccggactggctaatggc
agggtggcagtgtaccgcaggaaccggggggagagactgtgggatgtggactcgtgccgg
ctgctgtctctgggcggcccccccgtctgcaccctgctcacactggaagacacggtttgg
gccagctgtgccaaccaggtctccgtgatccagggaaccagcctccacacacagagtttc
agagcccattctgatccaggacgcagtgttagccatatgactcgctcaggcgggggggtg
tggatggccttcacccagggatcctctatccacctgtttcacacagagaccctggaacat
ctacaggaagtcaacatctccacccgcaccgcccatctgacaacaggtgaaatgtgtgtc
tccagcttgctgatctgccagggcctgctgtgggtggggacaagtcagggtgtcatcctc
accttccctgtgcccaccctggagggcatccccaagatcacaggtaaggggatgatgtct
ctgaacgctcactgtggtccggtggacgtcctggtggctacgtccagcactctggcctcc
gacctgctcaggcggaactccatccttaacggttgcgaggagggtgtcaacggagaaggg
gggcagaggttggatcagggcagctcttccaaggacgcagaagctccttcacccagggag
aagcccagcctcctactgcagtaccgcctccactccacccgacagctgcccggcaggctg
ctgacagcacagcccgaccaggggaacccccagcccctcccagactccccagagcacagc
ccagaggatggctctatctatgaggttagtgaggaccctgatgtgtgggtgagggggcgg
cccatggagcgggggaaggagggggaggccaggcgcggcaaagtcacctccacagccgtc
ttctccgggggcagaggatcccgcaggatgggacctggggcccccccctgctcagacact
gagaacactctgctgctgtggcagctcccgctcactctcggccaatga
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