Trematomus bernacchii (emerald rockcod): 117481578
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Entry
117481578 CDS
T09643
Symbol
prom1b
Name
(RefSeq) prominin 1 b
KO
K06532
prominin 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117481578 (prom1b)
04090 CD molecules [BR:
tben04090
]
117481578 (prom1b)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117481578 (prom1b)
CD molecules [BR:
tben04090
]
Proteins
117481578 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
Filament
DUF3587
DUF6056
7TM_GPCR_Str
Motif
Other DBs
NCBI-GeneID:
117481578
NCBI-ProteinID:
XP_033985199
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MLWTSWLVLLLCWGATSGEQQAEERDGTPVEARAEPQRQRSPPPVEPLDFGFVPAAVYDT
HAYFEPGPIGLLFHMVHAFLYVVQPNTFPKDLIVKVIQQNMGGIKIEEWRKPDNVVLLLQ
TIYYEAGFLICATIGILFVVLVPIIAMCFCVCRCCDNCGGEMHQRQRKNVDCQRGFYTAL
LVATSIFMTLGVFIAYAANHNVSAQIKNTRRLINNNMRDLKTFANNTPTQIEYLTAQYTT
AKNKVLSDLDNIGPLLGGRIHSQLEREVVPSLDNALRMAGAMRETKEALENVSSSLEVLQ
EGTAKLQASLSEERASLSNTLSDPACTNGAVSSTCNTIRSTLAQLGINSDYSKLPDVNHA
LVNVNTVLRTDLSNIVQKGYSSFNDTPQLVKEQTKNIVSALPRVKGMLDKIGTEINGFTK
MFPVEASLANFTIFLTQGQKNIESFYPQIDQIDFYRWVGCVAVLCTVVLVLAFNTLGLLC
GACGYDEQATPTTRGCLSNTGGNLLMAGVGFSFISVWVLMAIVSTLFVIGGNVEKMVCEP
LANRQLFKIIDTPFLVHPSKKNFLPGMLFQNPNIDLTLGSMYRDCYENNGLYHSLQLETM
FNINSFLNRTVYNKDLAKVLEGVQVDLQDVTLLEQAGRDNLINFANSGIGHINYEAYLTE
LNKGVTILDLLSFSTDLEAQADQLPRGALENALKGHASSIRQIHRDQVVPMEQAMSTLSQ
SIKQLQRMSNDLTVKATNILSAIDAAEYLITHNASHVVKRETKGYTENLVGYFRQYTAWV
KHSLSSEVAQCKPISNIVDSIEIVGCSIIVDSVNTFWFGLGGCCVLLIPSIIVSVKLAKY
YRRMDTEDVFEDISPYPNTLTRFPRASAPPSYADWEGSP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggacaagttggctcgtcctgctgctctgctggggggccaccagcggcgagcag
caggcggaggagagggacgggaccccggtggaggcccgggcggaaccgcagagacagcgg
tcccctccccctgtggagccgttggattttgggtttgtaccggctgctgtttacgatacc
cacgcttactttgagccaggacctattgggcttctcttccacatggtccacgcttttctc
tacgttgttcagccgaacacttttcctaaagatctgattgttaaagttattcaacaaaac
atgggaggaatcaaaatagaagaatggagaaagccagacaatgtggtgctgttactacag
acgatctactacgaggcgggtttcctcatatgtgcgactatcggcatcctgttcgtggtc
ctggtccccatcatcgccatgtgtttctgtgtgtgtcgctgctgtgacaactgtggaggg
gagatgcaccagagacaaagaaaaaacgtagactgtcagagaggtttctacaccgccttg
ctcgtcgccacctccatcttcatgactctgggagtgttcatcgcctatgctgcgaaccat
aatgtcagcgcccagattaagaacactcggaggttaatcaacaacaacatgagggacctt
aagacatttgctaacaacacacctacgcaaattgaatacctgacagcccagtacaccacg
gcaaagaacaaagtcctgtcagaccttgacaacattggacctttgcttggtgggaggatc
cacagtcagctggagagagaggtggtgccctcactggacaatgcgctgcggatggcagga
gccatgcgggagaccaaagaggctctggagaacgtcagctcctctctggaggttcttcag
gaggggacagccaagcttcaggccagtctatctgaggagcgggcctctctttccaacact
ttatcagaccctgcctgcactaatggagctgtgtcgtccacctgtaacaccatccgctcc
acgctcgcccagctgggaatcaactctgactactctaagctgccagatgttaatcacgcc
ctggtcaatgtcaatactgtcctgagaacagacctcagcaacattgtacaaaagggttac
tcatcctttaatgatacaccacaactggttaaagaacaaactaaaaacattgtctcagct
ctacctcgagtgaaaggcatgttggataagattggcacagagatcaacggcttcaccaag
atgttcccagtggaagcttctctcgccaatttcaccattttcctcacccaaggacagaaa
aatattgagtccttttacccacagattgaccaaattgacttttacaggtgggtcggctgt
gtggcagtgctctgcacggtggtcttggtcctggcctttaacaccctcggactgctgtgt
ggcgcctgcggctacgacgagcaagctacaccaacaacacgaggctgcctgtcaaacacc
ggcggcaacctgctaatggctggagttggcttctcttttatctccgtctgggtgctgatg
gccattgtctcaaccttgtttgttattggaggcaacgtggagaagatggtgtgtgaaccc
ctcgctaaccgacagctattcaagatcatagacactccattcctggttcatccctccaag
aagaacttccttcctgggatgctgtttcagaatcctaacattgacttgactttgggaagc
atgtacagggactgctatgagaacaacggtctgtaccattctctgcagctggagacgatg
ttcaacatcaactccttcctcaacagaactgtgtacaacaaggatctggccaaagtgttg
gagggagtgcaggtggacctgcaggacgtaacgctgctggagcaggccggcagagacaac
ctcatcaactttgccaactctggaatcggacatatcaactatgaagcctacctgactgaa
ttaaataaaggagtaactatcttggatctcctgtccttctctactgacctggaggctcag
gcagaccaactgccccgaggtgctctggagaacgcactgaaaggacacgccagcagtatc
agacagatccacagggatcaagtggttccaatggagcaagcaatgagtacactgagtcag
agcatcaagcagctgcagaggatgtccaacgacctgacggttaaggccacgaatatcctg
agtgccatcgatgcagcagagtacctcatcactcataacgcctcccatgtggtgaaaagg
gaaaccaaaggctacacagagaacttggtgggatacttcagacagtacacagcatgggtt
aaacattcgttgagttcagaggtggcccagtgtaaacccatcagtaacattgtggacagc
atagagattgtaggctgcagcatcatagtggattcagtgaacacattctggtttggtctg
ggaggctgctgtgtcctcctgatccccagcatcatcgtttctgtcaaactggcaaagtat
tacagaaggatggacacagaagatgtctttgaagatatctctccctatcccaacactctg
acccggttccctcgggcctcggctcctccgagctacgccgactgggaaggatctccttga
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