Trematomus bernacchii (emerald rockcod): 117481607
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Entry
117481607 CDS
T09643
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04810
Regulation of actin cytoskeleton
tben05100
Bacterial invasion of epithelial cells
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117481607 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117481607 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
117481607 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117481607 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117481607 (arpc1a)
05100 Bacterial invasion of epithelial cells
117481607 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117481607 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117481607 (arpc1a)
Membrane trafficking [BR:
tben04131
]
Others
Actin-binding proteins
Arp2/3 complex
117481607 (arpc1a)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117481607 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_HPS5
RMC1_N
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Rax2
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117481607
NCBI-ProteinID:
XP_033985240
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNSDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVMFVSENSLVAAGHDCCPMLFRCDDGAALTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKKDCRKFCTTGIDGAMTIWDIKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccacgcgtggaacagcgacagg
acacaaattgccatcagtccaaacaaccatgaagtccatatctacaagaagagtggtaac
cagtgggttaagacccatgaactgaaggagcataatggacacataacaggaattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaatgcctatgtgtggtcg
cagaaggagggcgtatggaagcccaccctggtcatcctcaggatcaaccgagctgccacc
ttcgtcaagtggtctccgctggagaacaagtttgccgttggaagtggtgctcgactcatc
tctgtctgctacttcgagtctgagaacgactggtgggtgagcaagcacatcaagaagcca
gtccgctccaccatcctcagcctggactggcatcccaacaacatcctgctggcggctgga
tcctgtgactttaaatgcagggtgttctcagcctacattaaggaggttgaggagaaacca
ggccccacaccctggggcagcaagatgccatttggggctgtgctagcagagttcggagga
gcaggtggagggggttgggtccactcagtctctttctcagcctctggtaaccgactggcc
tgggtcagccatgacagcactgtcactgtggtggacagctctaagactgccagtccttca
cagctgaagacggagttccttcctctcctcagtgtcatgtttgtttcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgcgacgatggtgcagcgctg
acatttgtgtcgaagctcgacctcccgaagcagagcatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacactgcgctggac
acactgcaccagaacagcatcacccaagtgtctatctatgaaggagacaaaaaggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatttgggacatcaagagtcta
gaagcatctatccagggtctccgcatcatgtga
DBGET
integrated database retrieval system
