Trematomus bernacchii (emerald rockcod): 117481619
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Entry
117481619 CDS
T09643
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117481619 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tben03029
]
117481619 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tben04031
]
117481619 (rhot1b)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117481619 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
117481619 (rhot1b)
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rho Family
Miro
117481619 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
EF-hand_1
MMR_HSR1
Dynamin_N
AAA
AAA_22
EF-hand_8
FeoB_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
117481619
NCBI-ProteinID:
XP_033985261
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPTVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYSVNNKTSIEKVTSHWLPLINDNTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNRHSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKN
MKLLCVKALTRIFKVSDLDNDGILNDNELNFFQRTSFNIPLESQALEDVKNVVRKNLSEG
VRDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELNQDYLFPPLKLPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEMKDLFDVFPYMPWGPDVHNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYMGYLGYSIVAEQESQAAGVTVTRDKKIDLQKKQTQRSVFR
CNVFGDVGSGKSGFLQAFLGRNLMRQNTINKEQRSYYAISTTYVYGQEKYLLLHEVFPDF
DYLSDDDLACDIVCLVYDASNPYSFEYCAKVFKQYFMDSKIPCMMIAAKSDLPEIKQIYG
CTPLDFCRKHKMPPPQSFTCNSAAVPSKDIYTKLTTMAMYPHARLRCMCTCNRCTFCLCQ
NFLNSELLQTVRAKLYAVVLRRHVSKADLKSSTFWLRTSVGATVFAVLGFAMYRVLLKQR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggacgtgaggatattgttggtgggagagcccaaagtggggaagacgtctctc
attatgtccctggtcagcgaggaattcccaactgtggttccttaccgagctgaggaaatc
accatacctgcagatgtcacaccagagagagttcctacacatattgtggactattcagag
gcagagcagacggatgagcagttgtttcaggagatctccaaggcaaatgtaatttgcatt
gtctactctgtcaacaacaagacttccatcgaaaaggtcaccagccactggctccccctc
atcaatgataacacagacaaggatagcagggttcctctgattctggtggggaacaagtcg
gacctggtggagcacagcagcatggagaccattctgcccatcatgaaccggcacagtgag
atagagacttgtgtcgagtgttcagcaaagaacctgaagaacatctcagagctgttctac
tacgcccaaaaggccgttctgcaccccacaggtcctctttactgcccggagaagaaaaat
atgaagttactgtgtgtcaaagccctgactcgaatctttaaagtgtctgacctggataat
gatgggattctcaatgataacgagctcaacttcttccagaggacaagcttcaacatccca
ctggagtcccaggcgttggaggatgtaaaaaatgtggtcaggaagaatttgagtgaagga
gtgcgagacaacggactcaccctgaaaggcttcctcttcctccacactctgttcatccag
agggggcgccatgaaactacgtggaccgtgctgaggaggtttggttacgacgatgacctg
gagttaaatcaagactacctcttccccccgttgaaacttcctccagactgcaccacggag
ctcaaccacaacgcctacctctttctccagagcgtctttgacaaacatgacaaggaccgt
gactgtgccttgtcaccagaggagatgaaggacctgtttgatgtgtttccctacatgcct
tggggtccagatgtccataacacagtttgcactaacgaccagggctggatcacctaccag
ggatatctctcccagtggacgttaacaacatatcttgatgtccaacgatgcctggagtat
atgggttaccttggttactcaatagttgctgagcaggagtcccaagcagcaggagtaaca
gtgaccagagataagaagattgacctgcagaagaagcagacccagcgcagcgtcttccgc
tgtaatgtctttggagacgttggcagcggcaaaagcggcttcctgcaagccttcctgggt
cgaaacctcatgcgccaaaacaccattaataaggaacaaaggtcctactatgccatcagc
acaacctatgtttacggccaggagaaatacctgcttcttcatgaagttttccctgacttt
gactacctgtctgatgatgacctggcctgtgacattgtctgcctggtctatgatgccagc
aacccttactcctttgaatactgcgccaaagtcttcaagcaatacttcatggacagcaag
attccatgtatgatgatagcagcgaagtccgacctgccggagatcaaacagatttacggc
tgcactcctctggacttctgcaggaagcacaagatgccccctccccagtccttcacctgt
aactctgcagcagtgcccagcaaagacatctacaccaaacttaccaccatggccatgtac
ccccacgcccggctgcgctgcatgtgcacttgtaaccggtgcaccttctgcttgtgtcag
aacttcctcaactctgagctgctgcagacggtcagggccaaactctacgctgttgtactc
agaagacatgtaagcaaagcagatttgaagagctccaccttctggctgcgaacgagcgtc
ggggccacagtgtttgcggtgctgggcttcgccatgtacagagtgctgctcaaacagcgg
tga
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