Trematomus bernacchii (emerald rockcod): 117481620
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Entry
117481620 CDS
T09643
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117481620 (rhbdl3)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117481620 (rhbdl3)
Peptidases and inhibitors [BR:
tben01002
]
Serine peptidases
Family S54: Rhomboid family
117481620 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
117481620
NCBI-ProteinID:
XP_033985263
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEKSSPRMTGGTREAPVNSSPAVASNAEGEEIEVLESTDVLPVAQEDQWKSLFDKYDPEN
SGFISTERFRDLLATHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRA
ILQGSRQLKGCSLRDEAGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWLILAIT
IAEVAVFMYYGFQLDRLVLQVSSPSFLKSPLPYHPQLRAQAWRYLTYIFMHTGIEHLSLN
MAMQLLVGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLA
NVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVG
LTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNIFAYSLLDVRLPPPP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagcagcccgaggatgacgggcggaacccgggaggcacctgtgaactcctct
ccagcggtggcgtccaacgcggagggcgaggagatcgaggttttggaaagcactgacgtc
ctccccgtggctcaagaggaccaatggaagtctctgtttgacaagtatgacccagagaat
tcaggcttcatcagcacagagcgcttcagagacctgttggcgacccacggctctgagctt
gacccccacaaactggaagtcctattggccctcgccgatggcaacgccgacggaaagatc
tgctaccaagactttgtgaacctgatgagtaacaagcgctccaacagtttccggagggcc
atcctgcaggggagccggcagctgaagggctgcagtctcagagatgaggcggggctgggt
ctgtctcagcgtctggtccgacacgtcgcctacgagacgctgccccgagaggtcgaccgc
aagtggtactttgacagctacacctactgtcccccaccctggctcatccttgctatcacc
attgctgaggtagccgtgttcatgtactatggcttccagctggaccgcctggtgctgcag
gtgtccagcccgtccttcctgaagagccccttaccgtaccacccccagctgcgagcgcag
gcctggaggtacctcacctacattttcatgcacactggaattgagcacctgagcctgaac
atggccatgcagctgctggtgggagtccctctagaaatggtccacggagccctgcggatt
ggactggtctacgtgtgtggtgtgctggcagggtctctggcagtgtctgtcaccgatatg
acggctcctgtggtcggctcatctggaggagtgtacgctctggtctcagcacatttggcc
aacgtagtaatgaattggtcgggaatgaagtgtcagtttaagttattccggatggccatg
gctctggtttgcatgagtgtagagtttggtcgggcagtgtggctgcgcttctaccccccg
gcctttcctccgtgccccaatcccagcttcgtagcccacctgggaggggtgatggttggg
ctgacgctgggtgtagtggtcctgcagaactacgagcagcgcctccaggagcagtccctg
ttttggatcttcttctgcgtctacaccttgtttgtgctctgcgctgtcttctggaacatc
tttgcctacagcctgcttgacgtgcgactgcctccaccaccttga
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