KEGG   Trematomus bernacchii (emerald rockcod): 117481700
Entry
117481700         CDS       T09643                                 
Symbol
primpol
Name
(RefSeq) DNA-directed primase/polymerase protein isoform X1
  KO
K22761  DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117481700 (primpol)
   03029 Mitochondrial biogenesis [BR:tben03029]
    117481700 (primpol)
Enzymes [BR:tben01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117481700 (primpol)
    2.7.7.102  DNA primase AEP
     117481700 (primpol)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    117481700 (primpol)
Mitochondrial biogenesis [BR:tben03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    117481700 (primpol)
SSDB
Motif
Pfam: Herpes_UL52 DNA_primase_S DUF6355
Other DBs
NCBI-GeneID: 117481700
NCBI-ProteinID: XP_033985415
LinkDB
Position
Unknown
AA seq 527 aa
MSKWGERMKKVEQLAQSFQLNPLVDQYKPRLWPCQPSSIWKLFPRQSMAISFAQSCKEAV
HVFALEKEKTFLGQRIFLVTSYSELWHYYRTYPQSLMHCYEVIPEGAVCKLYFDLEFHKP
SNQGADGKSMVSSLIQYVCEKLMEVYGIECSAKNILNLDSSTEDKFSRHLIFNLKNAAFK
DNLHMGRFIHSILQSVLSTPKSSLSVGMNSEEKNCETGRGQTSESPEAKRCKQEERDLSF
LQVKNKDGQHCLFVDLGVYTKNRNFRLYKSSKVGKNAAFTVADDNEFIHKPEKGISAEES
AFLASLVCNISFTGQRILTSDIPETKKSKTLGSPCQQESATDPVAGSLSGHLSSPYPEVD
NFVLTVVKKDGVHGSIRRWNYFAAEQLIVYDIANYRWCANVERFHKSNNIMIVVDLKEEA
WYQKCLDPECRNFRSSSYPLPQEICVSYIMTLDEEDQAYLMDDAGNIELSQASTPQRTAC
AEQGPADGWGDGQDDQDYLQSLDDFEQKSGDIPDLLLLKCMADFDSH
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgagtaaatggggagagcggatgaagaaggtggagcagctcgctcagtccttccagctg
aaccctctggtcgatcaatacaaacctcggctgtggccgtgccagccgtcctccatctgg
aagctcttccctcgtcaaagtatggcgatcagcttcgctcagagctgcaaggaggctgta
catgtttttgcacttgaaaaagaaaagacattcctgggtcaaaggatcttcctggtgacc
agctacagtgagctgtggcattactacaggacttacccacagtccttgatgcactgctac
gaggtgataccagagggcgctgtttgtaaactttactttgacttggagttccacaagcct
tcaaaccaaggggctgatgggaaatccatggtctcttcacttatccagtatgtttgcgag
aagttaatggaagtttatgggattgaatgctctgcaaaaaatatcctcaatctcgactcc
agcacggaggacaaattcagtcggcatctcatctttaatctgaaaaatgcagctttcaaa
gacaacttgcatatgggcaggtttatccattcaattcttcaatcggtcctgagcacaccc
aaaagcagcctgagcgttgggatgaattcagaggagaaaaactgcgaaacaggcagaggg
cagacgtctgagagtccagaggccaagaggtgcaagcaggaagagagagacctcagcttc
ctccaggtgaaaaacaaagatggccaacactgtctctttgttgatcttggtgtttacacc
aagaacagaaatttccgcctttacaagtcatcaaaagtgggaaagaacgctgcgttcacg
gtggcagacgacaacgagttcattcacaaacctgagaagggaatttctgcggaggaaagc
gcgttcttggcttctttagtctgtaatataagcttcacaggtcagagaattcttacgtca
gacatccctgaaacaaagaaatccaaaaccttgggatctccctgtcagcaggaatcagcc
acagacccagtggcaggctcactctcgggccacttgtcatcgccttatccagaagtggac
aactttgtattaactgtggttaaaaaggacggcgtacatggaagcatcagacggtggaac
tactttgctgctgaacagctgattgtctacgacatcgcaaattaccgctggtgtgcaaac
gtggaaaggtttcacaaaagcaacaacatcatgattgttgttgacctcaaagaggaagcg
tggtaccagaagtgtctcgaccctgagtgcaggaacttcaggtcctcaagctacccactg
ccacaggagatctgcgtcagctacatcatgacactggacgaggaggaccaggcctactta
atggacgatgccggcaacattgaactcagccaggcctcgaccccccagaggacagcgtgt
gcagagcagggacctgcagacggctggggggacgggcaggacgaccaggactatttacag
agcctggacgacttcgaacaaaaaagcggggatatccctgatctgcttctgctcaaatgt
atggcagactttgactcccattag

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