KEGG   Trematomus bernacchii (emerald rockcod): 117481846
Entry
117481846         CDS       T09643                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03008  Ribosome biogenesis in eukaryotes
tben03013  Nucleocytoplasmic transport
tben03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117481846 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    117481846 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117481846 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117481846 (xpo1a)
   03009 Ribosome biogenesis [BR:tben03009]
    117481846 (xpo1a)
   03016 Transfer RNA biogenesis [BR:tben03016]
    117481846 (xpo1a)
   03036 Chromosome and associated proteins [BR:tben03036]
    117481846 (xpo1a)
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117481846 (xpo1a)
Ribosome biogenesis [BR:tben03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    117481846 (xpo1a)
  Pre-60S particles
    117481846 (xpo1a)
Transfer RNA biogenesis [BR:tben03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117481846 (xpo1a)
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117481846 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v
Other DBs
NCBI-GeneID: 117481846
NCBI-ProteinID: XP_033985641
LinkDB
Position
Unknown
AA seq 1066 aa
MPAEMTMLADHPARQLLDFTQKLDINLLDNVVNSMHHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSSIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNQFTLTMGQLKQMLPL
NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRNNLRESLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLIVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIAAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVAAAREPEVLSTMATIVNKLGSHLTGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAS
SPTNNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccagccgaaatgacgatgttggccgatcacccagccagacagctgctggacttcact
cagaagctggacatcaacctgctggataatgttgtcaactccatgcaccatgacattgga
tcacagcaaagagtggcccaggaagttctcacaaacctcaaggaccacccagacgcctgg
acgagggtcgacaccatcctggagttctcccagaatatgaaaacaaaatattacgcactg
cagattctggagacggtcatcaaaacacgctggaaaattcttcctagaaatcagtgtgaa
ggtatcaagaagtatgttgttgggttgatcattaagacttcctctgatcctgccaacatg
gagaaagagggagtctacatttcaaaactcaacatgatcctcgtacagatcctgaaacag
gaatggcccaaacactggccgactttcatcagtgacatcgtgggtgcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtctttgac
ttctccagcggacagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcctccatattccagctgtgccagtttgtgatggaaaactcccagaatgcaccg
ctggtccacgccacactggagactctgctccgcttcctgaattggattcctttaggttac
atcttcgagaccaagctcatcagcactctggtctacaagttcttgaatgtgcccatgttt
cgcaacgttacgctgaaatgtttgacagagatagccggcgtgagcgtcaaccagtacgag
gagcaatttgtcaaccagttcaccctcaccatgggccagcttaaacagatgctgcctttg
aacaccaacatccgagtggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcacgttcctcaaagaacacggacagctcatcgagaagagg
aacaacctgagggagtcgctcatggaggcgctgcacttcatgctgctggtgtcggaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccacttggcagccgagctc
tacagagagagtccgttctccacctccagcaccccgctgctgtctgacgtgcccccccgc
agacacctctacctgcccgtgctctcacaggtgcgtttgctgatggtgagccgcatggcc
aaaccagaggaggtgctgattgtggagaacgatcagggggaggtggtgcgggagttcatg
aaggacacggacgccattaacctttacaagaacatgagggagactctcgtgtatctgacc
catctggactacgctgacactgaacgcatcatgacggagaagctgcacaaccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggatccatcagc
ggggcgatgcacgaggaggacgagaagaggttcctggtcaccgtcatcaaggacctgctg
gggttgtgtgagcagaaaagagggaaagacaacaaggccatcatagcgtcgaacatcatg
tacatcgtgggtcagtatcctcgcttcctccgagctcactggaagttcctcaagaccgtc
gtcaacaagctgtttgagttcatgcacgagacccacgatggagtgcaggacatggcgtgt
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgttcaggtccaggttgga
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgcgacctg
cagccgcagcaggtgcacacgttttacgaggcggtcggctacatgatcgccgctcagaca
gaccaggcggttcaggagcttctgatcgagaagtacatgctgctccccaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgtcagctgggcagcatcctgaagaccaacgtgcgcgcctgtaaagccgtgggccatccg
ttcgtcgtgcagctggggcggatctacctggacatgctcaacgtctacaagtgtctgagt
gagaacatctcctcagctgtccagaccaacggcgagatggtgaccaagcagcctctgatc
aggagcatgaggacggtgaagagagaaactctgaagctgatctcaggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaacttcgtgccccccctgctggaggcggtgctc
atcgactatcagaggaacgtcgctgccgcccgggagcctgaggtcctcagcaccatggca
accatcgtcaacaagctgggatcccacctgacgggagaaatccccaaaatcttcgacgct
gtcttcgagtgcactttgaacatgatcaacaaggactttgaagagttccccgaacacaga
acacacttcttctaccttcttcaagccgccacctcgcagtgtttccccgccttcctctcc
atcgccccggctcagtttaaactcatcctggactccatcatctgggccttcaaacacacc
atgaggaacgtggccgacacaggtctccagatcctgtacactctcctgcagaacgtctcc
ggagaggaggcggccgcgcagagcttctaccagacgtacttctgtgacatcctgcagcac
atcttctctgtggtcaccgacacctctcacactgcagggctgacgatgcacgccaccatc
ctggcctacatgttcaacctggtggaagaggggaaggtcagcgtggctctgagcgcctcc
agccccacaaacaaccaggcgcacgtgcaggagtacatcgccaacctgctgaagaccgcc
ttcccacatctgcaggacgcccaggtgaaggtgtttgtgacgggtctgttcagcctgaat
caggacatccccgccttcaaggagcacctgagggacttcctcgtgcagatcaaagagttt
gctggcgaggacacgacagacctgttcctggaggagagggaaacgtctctgcgccaggcc
caggaggagaaacacaagctgcagatgtctgtgcccggcatcctcaaccctcacgagatc
ccagaggagatgtgcgactga

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