Trematomus bernacchii (emerald rockcod): 117481846
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Entry
117481846 CDS
T09643
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03008
Ribosome biogenesis in eukaryotes
tben03013
Nucleocytoplasmic transport
tben03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117481846 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
117481846 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117481846 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117481846 (xpo1a)
03009 Ribosome biogenesis [BR:
tben03009
]
117481846 (xpo1a)
03016 Transfer RNA biogenesis [BR:
tben03016
]
117481846 (xpo1a)
03036 Chromosome and associated proteins [BR:
tben03036
]
117481846 (xpo1a)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117481846 (xpo1a)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117481846 (xpo1a)
Pre-60S particles
117481846 (xpo1a)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117481846 (xpo1a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117481846 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
117481846
NCBI-ProteinID:
XP_033985641
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFTQKLDINLLDNVVNSMHHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSSIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNQFTLTMGQLKQMLPL
NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRNNLRESLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLIVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIAAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVAAAREPEVLSTMATIVNKLGSHLTGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAS
SPTNNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgaaatgacgatgttggccgatcacccagccagacagctgctggacttcact
cagaagctggacatcaacctgctggataatgttgtcaactccatgcaccatgacattgga
tcacagcaaagagtggcccaggaagttctcacaaacctcaaggaccacccagacgcctgg
acgagggtcgacaccatcctggagttctcccagaatatgaaaacaaaatattacgcactg
cagattctggagacggtcatcaaaacacgctggaaaattcttcctagaaatcagtgtgaa
ggtatcaagaagtatgttgttgggttgatcattaagacttcctctgatcctgccaacatg
gagaaagagggagtctacatttcaaaactcaacatgatcctcgtacagatcctgaaacag
gaatggcccaaacactggccgactttcatcagtgacatcgtgggtgcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtctttgac
ttctccagcggacagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcctccatattccagctgtgccagtttgtgatggaaaactcccagaatgcaccg
ctggtccacgccacactggagactctgctccgcttcctgaattggattcctttaggttac
atcttcgagaccaagctcatcagcactctggtctacaagttcttgaatgtgcccatgttt
cgcaacgttacgctgaaatgtttgacagagatagccggcgtgagcgtcaaccagtacgag
gagcaatttgtcaaccagttcaccctcaccatgggccagcttaaacagatgctgcctttg
aacaccaacatccgagtggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcacgttcctcaaagaacacggacagctcatcgagaagagg
aacaacctgagggagtcgctcatggaggcgctgcacttcatgctgctggtgtcggaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccacttggcagccgagctc
tacagagagagtccgttctccacctccagcaccccgctgctgtctgacgtgcccccccgc
agacacctctacctgcccgtgctctcacaggtgcgtttgctgatggtgagccgcatggcc
aaaccagaggaggtgctgattgtggagaacgatcagggggaggtggtgcgggagttcatg
aaggacacggacgccattaacctttacaagaacatgagggagactctcgtgtatctgacc
catctggactacgctgacactgaacgcatcatgacggagaagctgcacaaccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggatccatcagc
ggggcgatgcacgaggaggacgagaagaggttcctggtcaccgtcatcaaggacctgctg
gggttgtgtgagcagaaaagagggaaagacaacaaggccatcatagcgtcgaacatcatg
tacatcgtgggtcagtatcctcgcttcctccgagctcactggaagttcctcaagaccgtc
gtcaacaagctgtttgagttcatgcacgagacccacgatggagtgcaggacatggcgtgt
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgttcaggtccaggttgga
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgcgacctg
cagccgcagcaggtgcacacgttttacgaggcggtcggctacatgatcgccgctcagaca
gaccaggcggttcaggagcttctgatcgagaagtacatgctgctccccaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgtcagctgggcagcatcctgaagaccaacgtgcgcgcctgtaaagccgtgggccatccg
ttcgtcgtgcagctggggcggatctacctggacatgctcaacgtctacaagtgtctgagt
gagaacatctcctcagctgtccagaccaacggcgagatggtgaccaagcagcctctgatc
aggagcatgaggacggtgaagagagaaactctgaagctgatctcaggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaacttcgtgccccccctgctggaggcggtgctc
atcgactatcagaggaacgtcgctgccgcccgggagcctgaggtcctcagcaccatggca
accatcgtcaacaagctgggatcccacctgacgggagaaatccccaaaatcttcgacgct
gtcttcgagtgcactttgaacatgatcaacaaggactttgaagagttccccgaacacaga
acacacttcttctaccttcttcaagccgccacctcgcagtgtttccccgccttcctctcc
atcgccccggctcagtttaaactcatcctggactccatcatctgggccttcaaacacacc
atgaggaacgtggccgacacaggtctccagatcctgtacactctcctgcagaacgtctcc
ggagaggaggcggccgcgcagagcttctaccagacgtacttctgtgacatcctgcagcac
atcttctctgtggtcaccgacacctctcacactgcagggctgacgatgcacgccaccatc
ctggcctacatgttcaacctggtggaagaggggaaggtcagcgtggctctgagcgcctcc
agccccacaaacaaccaggcgcacgtgcaggagtacatcgccaacctgctgaagaccgcc
ttcccacatctgcaggacgcccaggtgaaggtgtttgtgacgggtctgttcagcctgaat
caggacatccccgccttcaaggagcacctgagggacttcctcgtgcagatcaaagagttt
gctggcgaggacacgacagacctgttcctggaggagagggaaacgtctctgcgccaggcc
caggaggagaaacacaagctgcagatgtctgtgcccggcatcctcaaccctcacgagatc
ccagaggagatgtgcgactga
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integrated database retrieval system