Trematomus bernacchii (emerald rockcod): 117481903 Help Entry 117481903         CDS       T09643                                  Symbol atg4da Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben04136   Autophagy - other tben04140   Autophagy - animal tben04145   Phagocytosis Brite KEGG Orthology (KO) [BR:tben00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     117481903 (atg4da)    04140 Autophagy - animal     117481903 (atg4da)    04136 Autophagy - other     117481903 (atg4da)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:tben01002]     117481903 (atg4da)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tben04131]     117481903 (atg4da)    03029 Mitochondrial biogenesis [BR:tben03029]     117481903 (atg4da) Peptidases and inhibitors [BR:tben01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    117481903 (atg4da) Membrane trafficking [BR:tben04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     117481903 (atg4da) Mitochondrial biogenesis [BR:tben03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     117481903 (atg4da) SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  117481903 NCBI-ProteinID:  XP_033985727 LinkDB All DBs Position Unknown AA seq 499 aa AA seqDB search MNSVSPSAVQYVGGVMQEELVESRRQQPLERQGSFGLRPAPTTEPGREANGEPDELDKLK SKLMTAWNNVKYGWTVKSKTSFNKTSPVLVLGNSYLLNSEDEVERFRLAFVSRIWLTYRR EFPQLDGSTLTTDCGWGCMLRSGQMLLVQGLLVHLMPRDWAWPDAQQLTEVDFEVFRPRS PARAGGLPIPSFGSPRGSNTPEKSVASDQVPKCSQKKRPEYRRDSQAETLHHKLVSWFGD QPAAPFGLHQLVDIGKSSGKKAGDWYGPSIVAHILRKAVAKTSVLHNLAVYVAQDCTVYK EDVVHLCDLSLSQTPPDPSSQAWKSVLILVPVRLGGEVLNPSYIECVKNILKLECCIGII GGKPKHSLYFVGFQDEQLLYLDPHYCQPLVDVSQVNFSLESFHCSSPKKMPFNRMDPSCT IGFYAKNKKDFESLCSAVSEALSSSKEKYPIFTFVEGKSQDFGLEGHGSNNSGPAAHILP PGRQSMMNNRRNSDEFVFL NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt atgaactcggtttcccccagcgcagtacagtacgtggggggggtgatgcaggaggagctg gtggagagccggaggcagcagcccctcgagcggcagggcagcttcggtctcaggccggcc ccgaccacagagcccggcagagaggccaacggagagccggacgagttggacaaactgaaa tccaaactgatgacagcgtggaacaacgtcaaatatggctggactgtcaaatctaaaact tcattcaacaaaacctcgccagtcctcgtcctgggaaactcctatctgctcaacagtgaa gatgaggtggagcggtttcgtctggcctttgtctccaggatctggctgacctacaggagg gagttccctcagctggacggctccaccctgaccacagactgtggctggggctgcatgctg cgcagcggccagatgctgctggtgcaggggctgctggtccatctgatgcccagagactgg gcttggccagacgctcagcagctcactgaagtggactttgaggtgttcagaccgcgctcc ccagcccgggcaggagggctccccatcccctcctttggctctccacgaggatccaacacg cctgaaaagtctgtggcgagtgatcaggtaccaaagtgcagccagaagaagagacctgag tatagaagggacagtcaggcagagaccctccaccacaagctggtctcctggttcggggat cagccggctgcacctttcgggcttcaccagctggtggacatcggtaaaagttcagggaag aaggctggagactggtacggcccctctatcgtggctcacatactacggaaagcagtagcc aaaacctctgtgctccacaacctggctgtatacgtggctcaggattgtacagtgtacaaa gaggatgtggtgcatttgtgtgacctgtcgctgagccagaccccgcctgacccatccagc caggcctggaagtctgtcctcattctggtgcctgtacggctcgggggggaagtcctcaac ccgtcctacattgaatgtgtcaagaacatcctgaagctggagtgttgtattggaataatc ggaggcaaaccgaagcattcactatacttcgttggcttccaagacgagcagctgctgtat ctggaccctcactactgccagcctttggtggatgtgtcacaagtcaacttctcactggag tcgttccactgtagctctcctaagaagatgcccttcaaccgcatggatcccagctgtacc atcggcttttatgccaagaacaagaaggactttgagtctctatgttctgctgtcagtgag gccctgtcatcatcgaaggagaagtaccccatctttaccttcgtagagggcaagagtcag gattttggacttgagggccacggcagcaataacagtggacctgcagcccacatcctgccc cccggcagacagagcatgatgaacaacagaagaaacagtgatgagttcgtcttcctgtag

DBGET integrated database retrieval system