KEGG   Trematomus bernacchii (emerald rockcod): 117481935
Entry
117481935         CDS       T09643                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117481935 (kdm4c)
Enzymes [BR:tben01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117481935 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117481935 (kdm4c)
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117481935 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN Tudor_3 PHD Tudor_5 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 117481935
NCBI-ProteinID: XP_033985763
LinkDB
Position
Unknown
AA seq 1654 aa
MAGAEVFTPANPTCKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDDLMIDAPIQQMMAGQSGLFTQYNIQKKPLSVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNVGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWID
YGKVATQCTCSKDMVKISMEPFVKQFQPDRYANWMVGKDSAPLDHILATPGTTPELHSWL
QRRRKNKATNKGSTHSRMRSKRLRTTEEPIALDGSTALTSSKRKGLGGPTGPKVRKSAAG
TSCKEEEEKEKKMEAESKHKQNQNPFQLSGPCRQMCVVKVNRVESNSLSLSNNSYCNPIP
SPAAPVKNDLKAETVTHTDPQHLSGVTGRTPDGLRQGPEDTQMHLGTNEPRCCSPEPQDL
SPSQDCCIRVSPLEAQTLSSSSNTKNNSAETEMSLCPPDYNSQTSSFSCKEDTLRLSPNT
DTSMNTGTENYTNNITKAEKINTIVDTKHTNPHSTTKALYDLKSEPVEGGSSTSCCSFSP
SGQNCNLKKNITKGNRCPPLLQRNAVDMPQLTLEPADTVGICPLPPVLIQEMPSLTPAEY
GLTNVPKATSGSHQGAPVLHRETPTSSLSSNGAKPESKSNLKMSKEPLSVERANKWKSES
SYSCKGAAVSGSKGDAAHLTTNAMHKITSGVVHEKLKTPGIAAEQEHIKLENVPTGRTDA
SPLQLVKSNVPQTEQQYSLLELASKENLQHPAHRDNAFSLNNGLPFLTGTSNYNAHTPLC
TQGDSALQLHHHTTYSPSHCTFENSYMEPKPFSSSIWKNLNSQGPAVLIQSLHLELPSDF
THDPLPYTMWTEPQCKEVTDLEVTEQDLRESENQEEEGGPLTWAQLEPTSLVSVGAVESL
GLCGDYELHRGDTDGSDALSLCRELGRHRDTEESLHSNTAVTPLNMAGGEQDGVFDMDER
GSDGEEMEQQCSVKGESSSDSSDEEEQEEEEEEEEEEEEEEENDTSNCECDESGLEPGEV
CAYPALSVKRTTKSWRHPLRKPMARAVPTAVKPQDASDDEPPEASLAEEEEEEEEQEMEA
WAKPLIYLWQNKKRCFTSEREYNAHAATMQPHCAVCTLFMPYYQVEDKAEDDTPITAKDT
STPSSPMEGHTHPCGGLRRTKPLIPEICFSFREQNCPPTPTNPLLQEDGTSPLLYCQGCC
LQVHASCYGVAEGDVGEQWSCDRCTEGSFTAECCLCNLRGGALKKTKNDKWAHVMCAVAL
PEARFRDEAKRSPIDTSRIPMQRFKLKCIYCRKRCVGRRKAGACIQCSCGRCPTSFHVTC
AHAAGVIMEPDDWPYVVSITCHRHQSRSSSAKQRACQASISLGQTVISKHKNLRYYSSKV
TQITSQMFYEVMFDDGSFSNDTYPEDIVSKDCMNLGPPEVGEAVQVKWPDGLYYGAKYLG
SNVSYMYQVEFEDGSQVLAKREDVYTLNEDLPKKVKRRLSTASSMRFQDAFFTTQGERKR
QRTPNSRFQKDYVALPGLRTTAKSTWEQRSHKGK
NT seq 4965 nt   +upstreamnt  +downstreamnt
atggcgggggcagaggtgtttacccctgcgaaccccacctgcaaaatcatgactttcagg
cccaccatggaggagttcaaagacttcaaccagtacctggtttatatggagtctcagggt
gcacatcgcgcaggtctggctaaggtgattcctcctaaaggctggaagccccgtcgtacc
tatgatgacatagatgatctcatgattgatgctcccatccagcagatgatggctggccag
tcagggctcttcactcaatacaacatccagaagaagcctcttagcgtgcaggagttcagg
cgattagctaacagtgacatgtactgtacaccacgctacctgaattatgaagatctggag
aggaaatactggaagaacctgacttttgtctcacccatatatggtgctgatgtcagtggc
agcctctatgatgaggatgtggaggagtggaatgttggccacctcaactctatcctggat
gttatcgaggaggactgcggtgtgtccatccagggggtgaacactccatacctatacttt
ggcatgtggaagaccacattctcgtggcacactgaggatatggacctgtacagcatcaac
tacctccactttggagagcccaagtcatggtatgcaatcccccctgagcacgggaagaga
ctggagcgtctggctacaggtttctttcctaacagcttcaaggggtgtgaggcttttctt
cgtcacaagatgactctaatctccccttccatactgaagaagtatggcattccctttgat
aagatcactcaggaagctggagagttcatgatcaccttcccttatggctaccatgctggc
ttcaatcatggcttcaactgtgcggagtccaccaacttcgccactctgcgttggatagac
tatggcaaagtagccacacagtgcacttgtagcaaggacatggtcaaaatatccatggaa
ccgtttgtgaaacagtttcaaccggaccgctacgccaactggatggtgggcaaagattct
gcacctcttgatcacatactcgccactcccggtacaacaccggagctgcacagctggttg
cagaggaggcgcaagaacaaagctactaataaaggcagcacccactctcgtatgcgatcc
aagcgcctcagaaccactgaggagcccattgccctggatggcagcacagcgctgaccagc
agcaagaggaaaggcctggggggtccgactgggcccaaggtgcgaaagtctgctgccggg
acaagctgcaaggaagaggaggaaaaagagaagaaaatggaagccgagtcaaagcacaaa
cagaaccagaacccttttcagctctctggtccttgcagacagatgtgtgtggtcaaggta
aatcgtgtagagagtaatagtttaagtctttcgaataactcttactgcaaccccattccc
tctcctgctgcaccagtgaagaatgacctaaaggcagagacggtcactcacactgaccct
caacacctctcaggggtcacgggaaggactcccgatggactcagacaagggcctgaggat
acccagatgcatctgggaactaatgagccaaggtgttgctctcctgaacctcaagacctc
tcaccttctcaggactgctgtatcagggtctctcccctggaggctcaaacactcagctcg
tcctccaacacaaaaaacaactctgctgagactgagatgagcttgtgtccgcctgactat
aactctcaaacatcgagtttctcatgtaaagaagacactttaaggctatcaccaaacact
gacactagcatgaacacgggtactgagaattacactaacaacatcactaaagcagagaaa
ataaacacaattgttgataccaaacataccaatccacactccactacaaaagcactttat
gatcttaaatctgagccagtagaggggggtagtagcacatcatgttgctccttttcccct
tcaggacaaaattgcaatttgaagaaaaacatcacaaagggaaatcgttgccctcctctg
ctgcagaggaatgcagtagatatgccacaactcactctggagccagcagatacggttgga
atctgccctttgccacctgtactgatccaagagatgccctccctcaccccggctgagtat
gggctaaccaatgtccccaaagctacatcaggcagtcaccagggtgcacctgtgcttcat
agggagacgccaactagctctctgtcctcaaatggagccaaaccggagtcaaaaagcaac
ttaaagatgtcaaaagaacctctttctgtagaacgtgccaacaagtggaagtcagagtct
tcatatagctgtaaaggggcagcagtgtctggttcaaaaggagatgcggctcatttaact
accaatgctatgcacaaaataacatctggtgttgtccatgaaaagctaaaaacgccagga
attgctgcggaacaggagcatataaagctggaaaatgttcccactggacgaactgatgct
tcccctctccagctagttaagagcaatgtacctcaaacagagcagcagtacagcctatta
gagttagcaagcaaagaaaacttacagcacccggctcatagggacaatgcattcagtctg
aacaatggtctgccttttttaactggtacctcaaactataacgcccatacgccattatgc
actcaaggtgactctgcactccagctgcaccaccacactacatactccccttcccattgt
acttttgagaactcgtacatggaacccaaacctttctccagcagtatttggaaaaactta
aattcccagggtcctgcagtgctcatccagagtctgcacctagaactcccttctgacttc
acccacgacccgctgccttacaccatgtggaccgaacctcagtgcaaagaagtcacagac
ctggaggtcacagaacaagacctacgtgagtctgagaaccaggaagaggaaggggggcct
ctcacctgggcccagctcgagcccacctcactagtttcagttggtgctgttgagtccctg
ggcctctgtggggattatgagctccaccgaggggacacagatgggtctgacgccctctcc
ttgtgcagggagctggggagacatagggacacagaggagagtctacactccaatactgct
gttacacctctgaacatggcaggaggtgaacaggatggggtgtttgacatggatgaaagg
ggatctgatggcgaagagatggagcagcaatgtagtgtgaagggagagagcagtagtgac
tcatctgatgaggaggaacaagaagaagaagaagaagaagaagaagaggaagaggaagag
gaggaaaatgatacaagtaactgcgagtgtgatgaatcaggcctggaacctggggaggtt
tgtgcataccctgccctgtcggtgaagaggaccacgaagagctggcgtcacccactcagg
aaacccatggcgagggctgtacccacggctgtcaaaccacaggatgccagtgatgatgag
ccccctgaagcaagcttggcagaggaggaggaagaggaggaggagcaggaaatggaggcg
tgggcgaagcccctcatctacctgtggcagaacaagaagagatgcttcacatcagagagg
gagtacaatgctcatgcagccaccatgcagccccactgtgccgtgtgcacactcttcatg
ccctattatcaggttgaagacaaagcagaagacgatacacctatcacagccaaggacacc
tccacaccctcttctccaatggagggccacacacatccctgtggtggtctcagaagaacc
aagccccttatcccagagatctgcttttctttccgggagcagaactgccccccaactccc
acaaaccctctgctgcaggaagacggcacctcccctctgctctactgccagggctgttgc
ctgcaagtccacgcaagttgctacggtgttgccgaaggtgatgtcggtgaacagtggtca
tgtgatcgctgtacagaaggaagctttactgcagaatgctgtctctgtaacctcagaggt
ggagctctgaagaaaaccaaaaacgacaaatgggctcatgtgatgtgtgcggtggcacta
ccagaggcaaggttcagagacgaagccaagaggagtcctattgacaccagtaggatcccc
atgcagcgatttaaactgaagtgcatctattgtcgtaagcgatgcgtggggagaaggaag
gcaggtgcttgcatccagtgctcatgtggccggtgtcccacctcctttcatgtgacctgt
gcccatgctgctggggtcatcatggagcctgatgattggccatatgtcgtgtcaatcacc
tgccatagacatcagtcgcggagttcgtcagctaagcagcgggcatgccaagcgtccatc
tctctgggccagacggtgatctccaaacataaaaacctgcgctactacagctcaaaggtc
acgcagatcacctcccagatgttctacgaggtcatgttcgacgacggctccttctccaac
gatacgtaccctgaggatatagtgagcaaagattgtatgaacttgggccctcctgaagtt
ggggaagctgttcaagtgaagtggcccgatgggctgtactatggtgccaaataccttgga
tccaacgtatcctacatgtatcaggtggaatttgaggacggttctcaggtgctggcaaaa
agagaagatgtctataccttaaacgaagacctgcctaaaaaggtgaaacgtagactttcc
acggcctcaagcatgcgtttccaggacgccttcttcaccacgcagggggagaggaaaaga
caaagaacgcctaattcacgtttccagaaagactatgtggccctgccaggcctccgtaca
actgccaaaagcacatgggagcagcgcagccacaaagggaaatga

DBGET integrated database retrieval system