Trematomus bernacchii (emerald rockcod): 117481975
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Entry
117481975 CDS
T09643
Name
(RefSeq) general transcription factor 3C polypeptide 1 isoform X1
KO
K15199
general transcription factor 3C polypeptide 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117481975
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117481975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eWH_GTF3C1
B-block_TFIIIC
WH_GTF3C1_N
DUF7647
DUF6581
Trp_leader1
Motif
Other DBs
NCBI-GeneID:
117481975
NCBI-ProteinID:
XP_033985811
LinkDB
All DBs
Position
Unknown
AA seq
2796 aa
AA seq
DB search
MDSLTIVVDEVALEGLDGITIPSLWIRLENRKPAFPLKLDDLTKELVWRSLINNTELKLY
QLPQERDDVVLFDRFKGIDPETGIETRQNFSDRKDVYPVDMILENKNGIQGSCALFKERK
DITKNVRSESLAPLLNLQEALEQYGRKLVVAACQTLRFRTLIGPESDPDLKLNDDSYCVL
ERVGRARWQGELQKDLHGSSFKIDARKLHYMRKDLVKHGLVSMQSHVTRVISGQQQHSIL
LLLKRFYVNRRAKYDILMEYISNLLQQSPGQFATLLTLKHHLNVDDSTFKRVFQYMRNAK
LAEFCQYPLEDLDPSAGPCINKKGKKVLVRCLRFLKPYTKKGVTDDDDDDDEDDEDFPAG
RIGSNPSEGRIMERDVLSQAYNMVLSTGTKGIAQRGISYKVNVGKLESRMICRRLEREDM
IKGFMVDQGRQRTTQFISHRFVGVSNRLQRFAKEQERTKLLYSSAPQALDVDAPSPKSPP
TAKRKKSTSKSPAAKKFRKADGGGKEAVEEDGEVNTEVRALDGEGGEAGGEKSKVKAEHP
ESPFIQAAEGETAACSESNSSAAPDSVSTPTAEPAGVKEEDPNSNPFSTFPESEASKAAN
NSGDNDVVVVTDFCKRPARVRVKNKYALARSHETFRLLRRKNLIVEAVRNFKIIEGLFPL
QKIITDDEKKDGINTRCCKKTIVRTVDSLSREGLLKVYKTTIIQDGVTKNVEMVVHPSVQ
PTDEIVTRLIEQIRFRISSSYSTVRHQHAEEKAREEGAAPEDTSGSPSRANKRDKKKNKN
DEFKPTTVKGLGKTLGFQPKMHRMRVVHNFLWYLIYGHPSKQSSSDSPSTSDTSAQQNIS
DPDPKQRKDSPNKQTQPSVNTDSPNLDVISSGDEEGEQKDKSIPSDSQSDLKVVYSDEDS
WKKFIPPVRVHKGFVSGWAMVGDILLCMPLSIFIQVIQINYKVEGLEEYLNDPVKQHLLI
RTLPARMRRQLLYKRKYIFAFHENLQKLVYMGLVQFGHVEKFKEKDQVFLHVMRNASIVD
TTNAEPHYWLVTESFDKPFEQRHYTFNSAEDVENYWFDLMCVCLNTPLGVIRIKRNPSEE
ETDPSFVHERNVFVGLAYLLKGNLEVCDDGSIPGDGKGAGGLHSEFFAHLKRNWLWTNHL
LAVRTTPSGIEAKENKIRLKSLLSKNSLRIALKAAGTINPRYSTAKRSLIAETIEVDIEP
ASRNQQVVGGKKQKRKRTKKEVAKPPRKKKKEPKKRLPAHDEADHRALKMMTRQRVYWSV
QEDSLMMLCRVASNLLNSKLKRPFVPYVVVRDLLHAEFEISMDKTSVAVGRRTRYILKNP
QTLLNYRICLAEVYQDKPLMSLLEENKPADPSIVEDCAKSFLEYARLLRQKFSSVVLSAR
EMIMPDTKRQLFSRFKVSAIESGKRVSWKDNINSKNDIHAIVLQNLIQSTLAMTNNQMKA
SRSFQTFHMYSKYNQEMLCQAFIQCRKRGLVNRRRINQAFGPKKNRALPILPMSYQLSQS
YYRCFSWRFPNSLCTDSFRFLRSLINNGTSDDKPVTAFYNEPENRSESGDVVTERRAASE
KKKKQNKREEEGPEKEPEKEPEKEPSDSTKEGEKDQSKTEGEEELMEVNEEKTEEKNKAE
EQKNQEDSLTADSTEDPSSSEQTDNPPPREESPDVAAPQITSDESPDVSAPQITSEESPD
VSAPQITSEKSPDVSAPQITSEKSPDVAAPQITSKSPDVAAPPITSEKSPDVAAPPITSE
KSPDVAAPPITSEKSPDVAAPPITPEESPDVAAPPITSEKSPDVADPPITSEKSPDVAAP
QITSKSPDVAAPPITSEKSPDVAAPPITPEESPDVAAPLITPEESPDVAAPPITPEESPD
VAAPPITSEKSPDVAAPQITSKSPDVAAPPITSEKSPDVAAPPITPEESPDVAAPPITSE
KSPDVAAPQITSEKSPDVSAPPITSEKSPDVAAPQITPEESPDVAAPPITSEKSPDVAAP
QITSEESPDVATPQITSEESPDVAAPQITSEESPDVSAPQITSEESPDVSAPQITSEKSP
DVSAPQITSEKSPDVAAPQITSEKSPDVAAPPITSEKSPDVAAPPITSEKSPDVAAPPIT
PEESPDVAAPPITSEKSPDVAAPQITSEKSPDVSAPPITSEKSPDVAAPQITSEESPDVA
TPQITSEESPDVATPQITSEESPDVATPQITSEESPDVAAPQITSEESPDVATPQITSEE
SPDVAAPQITPEEPPDVAAPPITPEEPPDVSDMLQFCMESPGGASGVCLSLMSLGLLSVF
MSIPKQVVVVDSNLVDNDVVKSLVALEEEDEDDDEGEDCEGKKKLEVKSHQASHTNYLMM
RGYFFPGIVKIRNLNTLDNIVVESCIMKLQLRSTPAHQLFNTENSPPLDLSKCGPSLLPS
VLSSSTRSSSSTRSSSSSPHSVKECERRLVEQRGYTPQDVKACAQLRKSLEAARESGLGV
QDLYETHAQLQEAQGGRSRSLQRYLKELQEEGQVVKVGGLGPRWVLMQHSEPWLLTVKQP
SKKWHESRLNSNRIPFLEKNHNIPFMRMRTRREVREEEEEPPAKRSALEKQGGEDVAGSS
SDATGEKPTEEEELERKKEGSGEKMVNLEEEGGEVVLSEEESEQEKGREELESEEKQEGK
KDNGAESMEEEESSPSTSPTGVEKGENVSFISRPWRMVDGNLNRQVCKGMLEAILYHVMY
RPGLTQQALVEHYKDVLQPMAVLDLLQALTDSGCVMKKTLVRAAKPSLFARAVKTSSETK
AMMEEPDCVFYEPTISCCLRLGQMLPNERHWNSCMP
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atggattcgttgactatagttgtggatgaagtggctttggagggtctggacggaataact
atcccctctctgtggataagattagagaatagaaagcctgcttttcccttgaagcttgat
gacctcaccaaggagctcgtctggaggtcccttatcaacaacaccgagctgaagctgtac
cagctgccgcaggagagagacgatgtggtgctgtttgacaggttcaaaggcatcgaccca
gaaacgggcattgaaacaagacagaatttttctgacaggaaagatgtctacccggttgat
atgattctagaaaacaagaatgggattcagggctcctgtgcattattcaaagagaggaaa
gacatcactaaaaatgtccgctcagagtccctcgcccccttactcaacctgcaggaggct
ttggaacaatatggccgaaagcttgtcgtggcggcgtgccagacgctgcgattcaggacc
ctgattggtccggagagcgatcctgatttgaaactcaacgacgactcttactgcgtgctg
gaacgagtcggccgagctcgatggcaaggagagcttcaaaaggatctgcacggaagctcc
ttcaagatcgatgctcggaagctgcactacatgaggaaggatctggtgaaacacggcctg
gtcagcatgcagtctcacgtcacgcgagtgatctcaggacagcagcagcactccatcctg
ctgctgctcaaacgcttctacgtcaacaggagggcaaaatacgacatcctaatggagtac
atctccaacctcctgcagcagtccccgggtcagtttgccactctgctcactctgaaacac
cacctgaatgtggatgacagcactttcaagcgtgtatttcagtacatgagaaatgccaag
ttggctgagttctgtcagtaccctctggaggatttagacccatcagccgggccgtgcatc
aacaagaaagggaagaaagtgcttgtgcgctgtttgagattcttgaagccgtacacgaag
aagggcgtcactgatgatgacgatgatgacgacgaggacgatgaagatttcccagcaggg
agaatcggatctaatccttcagaggggcgaatcatggagagggacgtcctgtcgcaggcc
tataacatggtattatccactggcacaaagggaatcgctcagcgcgggatcagttataag
gtgaatgtcgggaagctggaatctcgtatgatctgtcgacggctggagagggaggatatg
atcaagggattcatggtggaccagggtcgacagaggacgacacaatttatcagccatagg
tttgttggtgtgagtaatcgactccaacggtttgctaaggagcaggagcggacgaagctc
ctctactcctctgcaccacaggcattagatgttgatgcgccatcccctaaatcaccacca
actgccaaacggaaaaaatcaacctccaaaagcccggcagcaaagaagtttaggaaagca
gatggcggaggaaaggaggctgtagaggaggatggagaagtgaacacagaagttagagcc
ttggatggagagggaggggaagcaggaggagagaaaagcaaggtgaaagctgagcatcct
gagagccctttcatacaagcagctgaaggtgaaaccgcagcttgcagtgaatcaaacagc
agtgcagcacctgactctgtgtccactcccacagcagaaccagctggagtcaaagaggaa
gatcccaactcaaatcctttcagcacttttcctgagagtgaggcgtcgaaagcagccaac
aactcaggagacaacgacgttgttgttgttacagatttctgcaagagaccggccagggtt
cgtgtgaaaaacaaatatgctttggcgagatctcacgagacgttccgcctgctgaggagg
aagaacctgatcgtggaggcggtgcgcaacttcaaaatcatcgagggtctcttcccgctg
cagaagatcattactgacgacgaaaagaaggatggaatcaacacgaggtgctgcaagaag
actatcgtacgcaccgtggacagcctgtccagagaaggcttactaaaggtttacaagacc
accatcatacaggacggggtcaccaagaacgtggagatggtcgttcatccgtccgttcag
cccaccgatgaaatagtgacacgactcatcgaacagatccgcttcagaatctccagttct
tactccactgtacgtcatcagcacgctgaagagaaagccagggaagaaggcgccgcccct
gaagatacgagcggcagcccttccagagccaataagagagacaagaagaaaaataaaaac
gacgagttcaagcccacaacagttaagggattggggaagactcttggattccagcctaag
atgcatcgtatgcgtgttgttcataacttcctctggtacctgatatacgggcacccgagc
aaacagagctcctctgactccccatcgaccagcgacacgtcggcacaacagaacatctct
gatcccgatcccaaacaacggaaagactccccgaacaaacaaacacagccgtctgtaaac
actgactcgcccaacttagatgtgatatcttcgggtgatgaagagggggagcagaaggat
aaatcgatacctagtgactctcagtccgacttgaaagtagtgtattctgatgaggactcc
tggaagaaattcattcctcctgtgcgtgtgcacaaggggtttgtcagcggctgggcgatg
gtcggagacatcctcctctgcatgccgctctccatcttcattcaggtcatacagatcaac
tataaggtggaaggactggaggaatatctcaacgaccccgtgaagcagcaccttctcatc
cgaacgctgccggccagaatgagaagacagctgctctacaaacggaaatacatcttcgcc
ttccatgagaacctgcagaagttggtctacatgggtctggtgcagtttgggcatgttgag
aagttcaaggagaaagaccaggtgtttttgcatgtgatgcgtaacgcctccatcgttgac
accaccaacgccgagcctcactactggctcgtcacggagtccttcgacaaacccttcgag
cagcgccactacacgttcaacagcgcagaggacgtggaaaactactggttcgacctgatg
tgtgtctgcctcaatacaccactgggggtgatccgcattaagagaaatccctctgaggaa
gaaactgatccttcctttgtgcacgaacgcaacgtctttgtgggactggcatacctgctc
aagggaaatcttgaagtgtgtgacgacgggtcgatacccggagacggtaaaggagccgga
ggtttgcactctgaattcttcgctcatcttaaacgcaactggttgtggaccaatcatctt
ctcgctgtgagaacgaccccaagtggcatagaggcgaaggagaataaaatcagactgaag
agcctgctgagtaaaaactctctcaggatcgcactcaaagctgcaggaactattaaccct
cgttattcgactgccaaacgatcactgatagcagaaactattgaggtggatattgagcct
gcgtccagaaaccagcaggtggtcggaggaaagaaacagaagaggaagagaaccaagaag
gaggtcgccaagcccccacgcaagaagaagaaagagccaaagaaacgcctgccggctcac
gacgaggccgaccaccgagctctgaagatgatgacgaggcagagagtgtactggtccgtg
caggaggactctctgatgatgctctgcagagtggcctccaacctgctcaacagcaagttg
aagaggccgttcgtaccgtacgttgtggtcagagacctgctccacgcagagttcgagatc
tcgatggataaaacatccgtcgctgtcggacgtcgaacacgatacatcctcaaaaatcct
cagacgctcctgaactacaggatctgtctggctgaggtgtatcaggacaaacctctgatg
agccttctggaggaaaacaaacccgccgatcccagcattgtcgaggattgtgcaaaatcg
ttcttggagtacgcccggctgctccgacagaagttcagctctgtggttctgagcgctcgg
gagatgatcatgcccgacacaaaacgccagctcttctcacggttcaaggtctcagcgata
gagagtggaaaacgtgtgtcatggaaagacaacatcaactccaagaatgatattcatgcc
atagtgttacaaaacttgatccaaagcactctggccatgaccaacaatcagatgaaggcg
tccagatccttccagaccttccacatgtacagtaagtataaccaggagatgctgtgccag
gcgttcattcagtgcaggaagagagggctggtgaaccggcgccgcatcaatcaggcgttc
ggaccgaagaagaaccgagcgctgcccatcctgcccatgtcctaccagctgtcccagtcc
tactacaggtgtttctcgtggcgtttccctaactcgttgtgcaccgactccttccgcttc
ctgaggagtctcatcaacaacgggacgtccgacgacaaacccgtcactgcgttctacaat
gagccggagaacaggtcggagagcggagacgtggtaacggagagaagagcagcatcggag
aagaagaaaaaacaaaacaaacgggaggaagaaggaccagagaaggaaccagagaaggaa
ccagagaaggaacccagtgactctacaaaggagggagagaaggaccaaagtaaaacggaa
ggagaagaggagttaatggaggtgaacgaggagaaaactgaggagaaaaacaaagcagag
gaacagaagaaccaggaagactcgctcacagctgattctactgaagatccctccagcagc
gagcagacggacaatcctccacccagagaggagtctccagatgttgctgctcctcagata
acttcagatgagtctccagatgtgtctgctcctcagataacttcagaggagtctccagat
gtgtctgctcctcagataacttcagagaagtctccagatgtgtcggctcctcagataact
tcagagaagtctccagatgttgctgctcctcagataacttcaaagtctccagatgttgct
gctcctccgataacttcagagaagtctccagatgttgctgctcctccgataacttcagag
aagtctccagatgttgctgctcctccgataacttcagagaagtctccagatgttgctgct
cctccgataactccagaggagtctccagatgttgctgctcctccaataacttcagagaag
tctccagatgttgctgatcctccaataacttcagagaagtctccagatgttgctgctcct
cagataacttcaaagtctccagatgttgctgctcctccgataacttcagagaagtctcca
gatgttgctgctcctccgataactccagaggagtctccagatgttgctgctcctctgata
actccagaggagtctccagatgttgctgctcctccaataactccagaggagtctccagat
gttgctgctcctccaataacttcagagaagtctccagatgttgctgctcctcagataact
tcaaagtctccagatgttgctgctcctccgataacttcagagaagtctccagatgttgct
gctcctccgataactccagaggagtctccagatgttgctgctcctccaataacttcagag
aagtctccagatgttgctgctcctcagataacttcagagaagtctccagatgtgtctgct
cctccgataacttcagagaagtctccagatgttgctgctcctcagataactccagaggag
tctccagatgttgctgctcctccaataacttcagagaagtctccagatgttgctgctcct
cagataacttcagaggagtctccagatgttgctactcctcagataacttcagaggagtct
ccagatgttgctgctcctcagataacttcagaggagtctccagatgtgtctgctcctcag
ataacttcagaggagtctccagatgtgtctgctcctcagataacttcagagaagtctcca
gatgtgtctgctcctcagataacttcagagaagtctccagatgttgctgctcctcagata
acttcagagaagtctccagatgttgctgctcctccgataacttcagagaagtctccagat
gttgctgctcctccgataacttcagagaagtctccagatgttgctgctcctccgataact
ccagaggagtctccagatgttgctgctcctccaataacttcagagaagtctccagatgtt
gctgctcctcagataacttcagagaagtctccagatgtgtctgctcctccgataacttca
gagaagtctccagatgttgctgctcctcagataacttcagaggagtctccagatgttgct
actcctcagataacttcagaggagtctccagatgttgctactcctcagataacttcagag
gagtctccagatgttgctactcctcagataacttcagaggagtctccagatgttgctgct
cctcagataacttcagaggagtctccagatgttgctactcctcagataacttcagaggag
tctccagatgttgctgctcctcagataactccagaggagcctccagatgttgctgctcct
cctataactccagaggagcctccagatgtgtcggacatgctgcagttctgcatggagtcc
ccggggggagcgagtggagtctgcctcagcctgatgtctctgggactgctgagtgtcttc
atgtccatccccaaacaggtggtggtggtggacagcaacctggtggacaacgacgtggtc
aagagtttggtggcgctggaagaagaggacgaagatgatgatgaaggtgaggattgtgag
gggaagaagaaactggaggtgaagtcacatcaggcgtctcacaccaactacctgatgatg
cgtggatacttctttcctggcatagtgaaaatccgtaacctgaacactctggataacatc
gtggtggagtcgtgcatcatgaagctgcagctgcgcagcactcctgctcaccagctgttc
aatacagagaactctccaccgctggacttgtctaaatgcggtccatccctgctgccctcc
gtcctctcctcctccacccgctcttcctcctccacccgctcctcctcctcctctccccac
agtgtgaaggagtgtgagaggcgtttggttgagcagagaggttacactcctcaggacgtt
aaagcgtgtgctcagctcaggaagagtctggaggcagcgagggagagcggtctgggggtc
caggacctctacgagactcacgctcagctgcaggaggcgcaggggggccgaagcaggagc
ctgcagcggtacctgaaggagctgcaggaggagggccaggtggtgaaggtggggggtctg
ggtcctcgctgggtgctgatgcagcactctgagccctggctgctgaccgtgaagcagccc
tccaagaaatggcacgagtcccgcctcaactccaacagaatcccctttctggagaagaac
cacaacatccccttcatgcgcatgagaaccaggcgggaggtccgagaggaggaagaggaa
ccgccggcgaaaagatcagctttggaaaaacaaggaggcgaagatgtagcgggatcatcg
agtgacgcaacgggagagaaaccaactgaggaagaagagctggagaggaagaaggaggga
agtggggagaagatggtgaacttggaagaggagggaggagaggtggtgctgtctgaagag
gaaagcgagcaggagaaaggaagggaggagctggagagtgaggagaaacaggagggaaag
aaagataatggagcagagagcatggaggaagaggaatcctctccatcaacaagcccgact
ggtgtggagaagggggaaaacgtgagcttcatcagccggccgtggcgcatggtggacggg
aacctgaaccggcaggtgtgtaagggcatgctggaggccatcctgtaccacgtgatgtac
cgacccggactcacgcagcaggcgctggtggagcactacaaagacgtgctgcagcccatg
gccgtgctcgacctgctgcaggcgctcacagactccggctgtgtgatgaagaagactctg
gtgagagctgctaaaccttcgctgttcgcccgcgctgtgaagacgagcagtgagacgaag
gcgatgatggaggaaccggactgcgtgttctacgagccgaccatcagctgctgcctgcgg
ctcggccagatgcttcccaacgagcgacactggaacagctgcatgccctga
DBGET
integrated database retrieval system
