Trematomus bernacchii (emerald rockcod): 117482014
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Entry
117482014 CDS
T09643
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2 isoform X1
KO
K13339
peroxin-6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117482014 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117482014 (pex6)
Membrane trafficking [BR:
tben04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117482014 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
AAA_5
RuvB_N
TIP49
DUF815
AAA_7
Vps4_C
RNA_helicase
NPHP3_N
nSTAND3
TsaE
Mg_chelatase
AAA_29
AAA_25
AAA_28
AAA_17
AAA_24
AAA_19
AAA_14
Parvo_NS1
IstB_IS21
PhoH
Motif
Other DBs
NCBI-GeneID:
117482014
NCBI-ProteinID:
XP_033985850
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MALQVELCCLETFPSHLSPLDVLIFQSHLDSIFQNDSDPPTVLFTPQPPQGSCKPGILLR
LHATTEEETAGSPRERPEFKTRVRLFTSRLFLQHHGLQRAGSTGTIRAMEPVSLNRVVLG
ARSRQTLLWAGGERFTEGLLELCSPGQCLLARQGDPLLLPAIHLGEDPGQLMELLVLECS
PVTQGRITPDTSLVLTDCWDPPAASPPCTLVPLRLCVSDFAHYADGLGGGLSLLDNRKLL
GSGFLGVLQALECRLDVRVVDTQRWRGVKGQQGVSVDVDSCVFVSKQLLLRLGLFNQEWV
KLSRPGGSCRTTDVRGGVCRQRLVSVLVLDPSLSPDLQNQEEVGFISATLWFNMTQGDVI
PVSSCTLRMKRWRPSPPAPGGPHSHSFCRSASPAFSSELHVQPVISPLYNSLSCYDTVLS
EHFSTPRLVSEGDILTVRAENHPDLLENNSEGIHRCPVLYFRVQKVCPSAEREEERGEAL
LADRQHTSLYMQASTSSAVPPLSVEGSSLWSSLSPPGLLRTVELLSSIVLPHLHHSSSLP
GCTVLLHGPSGSGKMTAVSAASRRLNLHLLKVDCVSVCADTPAASEVKLSSVFQRAEALQ
PCVLLLRNLQVLLRPRGGAEEDGRVQAALSQLLHSAPTSVVVVATVCRPREVSAGVISAF
VHQVALESPSEEQRRSMLLSLSRGLPLGRDVDLERLSKLTAGFVLGDLNALLVEAGRAAC
RRLLQTCRGRQEEDLCSSGVTILNQDFSSALETLQEAQSTAIGAPKIPDVRWEDVGGLHQ
VKKEILDTVQLPLQRPELLSLGLNRTGVLLYGPPGTGKTLLAKAVATECSMTFLSVKGPE
LINMYVGQSEENIREVFLRARSAAPCVIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAE
LDALQSSVGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRGSQLQVLQAILRKFQV
DSAVDLQQLVDRCPDHMTGADLYALCSDAMTAAIKRKISLIDEGLDSEESPVLVNAEDFS
SALENFKPSVSEEELLRYRNIQQKLTAK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggtggagttgtgttgcctggaaactttcccttctcacctcagtcctctg
gatgttttgattttccaatctcacctggactcgatcttccagaatgacagcgacccacca
accgtcctcttcaccccacagccgcctcagggctcctgtaagccgggcattttactgcgc
ctccacgcgacaaccgaggaggagactgctggttcccccagagagagacccgagttcaag
acccgggtccggctcttcaccagccggctcttcctgcagcaccacgggctccagagggcc
gggagcaccgggactatccgggccatggagccggtttccctgaacagagtggtgctggga
gcccgcagcagacagactctcctctgggcaggaggagagaggttcaccgaggggctgctg
gagctctgcagcccaggacagtgtctgctggcccggcagggagacccgctgctgctgccc
gccatacacctgggggaggacccgggacagctgatggagctgctggtgttggagtgcagt
cctgtcactcagggacgcatcacgcccgacacctctctggttctgactgactgctgggac
cccccggccgcctccccaccctgcacacttgtaccgctcagactgtgcgtgtcggacttc
gctcactacgccgacggcctcggaggcggtctctctctcctggacaacaggaagctgctg
ggctctgggtttttgggcgtcctgcaggcgctggagtgcaggctggacgtccgggtggtg
gacactcagcgatggcggggggtcaaaggtcagcagggagtttctgtggatgtggacagc
tgtgtgtttgtgagcaaacagctgctcctcaggctggggctgttcaaccaggagtgggtg
aagctgtcgcggccgggtggatcctgcagaactactgatgtgagggggggggtctgcaga
cagaggctggtctctgtgctggtgctagatccatcactaagtccagacctgcagaaccag
gaggaagtcggtttcatatcagcaactctgtggttcaacatgactcaaggagacgtgatc
cccgtgagcagctgcactctgaggatgaagaggtggagaccctctcctccagcgcccggc
ggtcctcactctcacagcttctgtcgctcagcttctcctgcgttctccagcgagcttcac
gtccagcccgtgatttccccgctctacaacagcctcagctgctacgacacggtgctgtct
gaacacttcagcacgcccaggctggtttcagagggagacatcctgaccgttcgtgctgaa
aaccatccagacctgctggagaacaactcagaaggaatacacaggtgtccggtgctgtac
ttcagagtgcagaaggtgtgtccgtctgcagagagagaagaagagaggggagaggctctc
ctggctgaccgacaacacacctctctctacatgcaagcgtccaccagcagcgcggtcccc
cccctctcagtggagggctcctctctgtggagcagcctctctcctccgggcctcctcagg
acggtggagctcctcagcagcatcgtcctccctcacctgcaccacagcagctctctgccc
ggatgcaccgtcctccttcacggtccctcaggaagtgggaagatgacagcagtcagtgca
gcgagtcggagactgaacctccacctgctgaaggtggactgtgtgagtgtgtgtgctgac
accccagcagcctcggaggtgaagctcagctcggtgtttcagcgggctgaagccctgcag
ccctgcgtcctgctgctcaggaacctgcaggtcctgctccgccctcgagggggcgccgag
gaggacggcagggtgcaggccgcgctgagccagctgctccacagcgcccccaccagcgtg
gtggtggtggcgacggtctgcaggcctcgggaggtgtcagcaggggtcatatcagcgttc
gtccaccaggtggcgctggagagtccctctgaggagcagaggcgctccatgctgctcagc
ctgagccgaggccttcctctggggagagacgtcgacctggagaggctctccaaactcacc
gcggggtttgtgttgggggatctgaacgctctgctggttgaggcggggcgcgccgcctgc
aggaggctccttcagacctgtcggggcagacaggaggaggatctgtgctccagtggagtc
accatcctgaaccaggacttctcctcggccctggagaccctgcaggaggcccagtccacg
gccatcggagcccccaagatccctgatgtgcgctgggaggacgttggaggtcttcatcag
gtgaagaaggagatcctggacacggtgcagctccctctgcagcgcccggagctcctgtct
ctgggtctgaaccggaccggggtcctgctctacggacccccagggaccgggaagaccctg
ctggccaaagccgtggcgactgagtgctccatgaccttcctcagtgtgaaaggcccagag
ctcatcaacatgtacgtgggtcagagtgaagagaacatcagagaagtgttcctcagggcc
cgctcagcagctccctgtgtgatcttcttcgatgagctggactctctggctcccagcagg
gggcgcagcggggactctgggggggtgatggacagagtggtgtctcagctgctggccgag
ctcgacgccctgcagtcgtccgtcggggtttttgtgatcggagccacaaaccgtccagat
ctgctcgaccaatcactgctgaggcccggcaggtttgataaactggtttatgttggaatc
aacgaggaccgaggatcccagctgcaggttctccaggccatcctcagaaagttccaggtg
gactctgcggtggacctgcagcagttggtggatcgctgccccgatcacatgaccggcgcc
gacctgtacgctctgtgttcagacgccatgacggccgccatcaagaggaagatctcgctc
atcgatgagggtctggactcggaggaatctcctgtcctcgtcaacgctgaggatttctcc
tcagcgttggaaaacttcaagccgtcagtttccgaggaggagcttctgagatacagaaac
atccaacagaaactcaccgcgaagtag
DBGET
integrated database retrieval system
