Trematomus bernacchii (emerald rockcod): 117482025
Help
Entry
117482025 CDS
T09643
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117482025 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117482025 (usp38)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117482025 (usp38)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117482025 (usp38)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117482025 (usp38)
BRITE hierarchy
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117482025
NCBI-ProteinID:
XP_033985867
EnsemblRapid:
ENSTBNG00005014776
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MDKILEGLVSSDHSVPVKRAIVKKVVEAAEKEVTEEQCHALFTLTTRLILLGEDAFQRQI
GIQVLEAYARYHRPEFEHFFTKDFALTLLQQGYAHLDRKDPAVIDYIHCCLRLLISCPSV
LEIFGVIQVEVLRMVCERPEPALCAHLSSLLSDFVQCLPRDKSGVLFCQQLVRTISYFHC
FASQERELREYVGQVTKVSTLLQNIWKADPATLLPSLQEVFAIISSTDSSFDPSIALASL
VQHIPVQMITVLIKSLTTDNNVKDASMTKALCRMIDWLSWPLAHHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFSRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHVVHLVQ
SLRTDGLSTSKAFLLQFTELIHCMMYQYSGFPDLYDHILEAIKDLPKPEEEKIKLVLNQS
AWTSQSNSFASGPLKQLGKSETGKTGLVNLGNTCFMNSIIQTLFMATDFRRHVLSLHLNG
SNTLMKKLQLLFAFLAHTQRAAFAPKTFLEVSRPPWFNAGSQQDCSEYLRFLLDRLHEEE
KTIQVLESVKPKMASLVDTNGKEPTAQSSPEDAEESSLSPAEMKPEDDGRTLTEKMFRGK
LITGIRCMQCNCISEKGEPFTDLSLAFCPSATSQGGPQPEGPSEEPKGLCQGSVNGGSEI
SEPGPAPAPASNINDVPVTNEPPLSVPDLVNYFLAPEILDEDNAYFCEKCSSLQRAERTM
KVVSAPEYLILTLLRFSYDAKCHVRRKILDNVTIPPLMRLPVHAPSMHTQCSSSSSSPLQ
VDSPESSENLAKKLKPSRKEEEDEEKERIHGAEQMNGDGEILSVPYVLSSVVMHSGISSE
SGHYYSYGRNINGADGTQHTANHLALKEDLGNGQAECSLSTCSALPIPPEQRDTVSNGGQ
EARDWLLFNDSRVTFTSFQSVQNITDRFPKDTAYVLMYRKQELPGQNINRGLVANGMRPS
AEPPLQKELLDAIIKDNKLYLQEQELNARTHALQAPSSSSSFRPNGSDDNNPPGSCGPSG
GGGGGGGFNTISRLVF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggagggccttgtgagctccgatcactctgttccagtgaagagggcc
atagtgaagaaggtagtggaagcagcagagaaagaggtgacagaggagcagtgtcatgcg
ttgtttactctcaccacccgcctcatcctgcttggtgaagatgcatttcagaggcagatc
ggcatccaggttttggaagcctacgcgcgttaccaccggccagagtttgagcatttcttc
actaaagactttgcactcactcttctccagcagggctatgcccatctggaccgcaaagat
ccagccgtaatagactacattcactgctgcctgcggctgctcatcagctgcccctcggtg
ctcgagatcttcggcgtgattcaggtggaggttctgaggatggtgtgtgaacgtcctgag
cctgctctttgcgcccacctgagctctttgctgtcggactttgtgcagtgcctcccgagg
gataagtcgggcgttttgttctgccagcagctggtgaggaccatcagttacttccactgc
tttgccagccaagagcgggagctgagagagtatgtgggtcaggtgactaaggtcagcaca
ctgctgcaaaacatctggaaggcagatccagccacactgcttccctctctgcaagaagtg
tttgctattatctcttccacagactcctcctttgacccctccatcgccctggccagcctg
gtgcagcacatccccgtccagatgatcaccgtgctgatcaagagtctcaccacagacaac
aatgtgaaagacgccagcatgactaaagccctctgcaggatgatcgactggctctcttgg
cctctggctcatcatgtggacacctgggtcatcgctctactgaaagggctagctgcagtt
cagaagttcaccatcctcatagacgtcactctgctcaaaatcgaactggtcttcagccgt
ctgtggtaccccattgtgcggcagggggcgcttgctgtgctctcccacatgctgctgagt
ttccagcactctcccgaggccttccatttggttgttccacatgtggtgcatctagtccaa
tctttacggacagatggtctctccaccagcaaagcattcctgctgcagttcactgagcta
atacactgcatgatgtaccagtactccggcttccctgacctctacgaccacatactagag
gccatcaaggatctcccaaaaccagaggaagagaagattaagctggtgttaaatcaaagt
gcctggacgtcccagtccaactcgtttgcctcgggtcctctgaagcaacttggaaagtct
gagactgggaagactggcctggtcaacctgggaaacacctgcttcatgaacagtatcatc
cagaccctcttcatggccacagatttcaggcgacatgttttatcattacatctaaatggt
tcgaacacattgatgaaaaagctccagctgctctttgctttccttgcacacactcagagg
gcagcgttcgctcccaaaaccttcttggaagtatctcggcctccctggttcaacgccggc
tctcagcaggactgttctgagtacctccgattccttctggacaggttacatgaagaagag
aaaacgattcaggtcctggaatcagtaaagccaaagatggcctctcttgttgacacaaac
ggcaaagagccaacagctcagagttcaccggaggacgctgaggagtcatctctgagtcca
gcagaaatgaaacccgaggacgacggcaggactttgacagaaaagatgttcagggggaag
ctgatcaccgggattcgctgcatgcagtgcaactgtatctctgagaaaggggagcctttt
acagacctctccttggccttctgtccttctgccacctctcagggcggcccccagcccgag
gggccctcagaggaacccaaaggtctctgccagggatccgtcaatggcggtagtgaaata
tctgagcctggcccggccccagccccagctagcaatatcaatgatgtgccagtgacaaat
gagcctcctctctccgtgccggacctggtgaactacttcctggctccagagatcctggac
gaagacaatgcctatttctgtgagaagtgtagctcactgcagcgggcagagaggaccatg
aaagtggtatcggcgcctgaatacttaatcctcaccctgctgcgattctcatatgatgcc
aaatgtcacgtccggaggaagattctggacaatgtcaccatcccgccactcatgagactt
cccgttcatgccccttcaatgcacacacaatgttcctcttcttcctcttctcctctgcaa
gtggattcccctgagagcagtgagaatctggccaagaagctcaaaccgtcgcgaaaagaa
gaggaggacgaggagaaggagaggatacacggagcagagcagatgaatggagatggcgag
atcctgtcagtgccctatgtcctcagctcagtggtgatgcattctgggatatcgtccgag
agtggccactactattcatatgggcgtaacattaatggagcggatggaactcagcacaca
gccaaccacttagccctaaaagaggatttggggaatggacaggctgagtgtagcctctcc
acctgctcagctctccccatcccacctgaacagagagacaccgtatctaacggaggacag
gaggccagggattggctgctgttcaatgatagcagagtgacattcacatctttccaatca
gtgcaaaacattacagaccgcttccccaaggacacagcttatgtgctcatgtacaggaag
caggagctaccggggcagaacatcaacagggggctggtggcaaatgggatgagaccgagt
gctgagcctcccctgcagaaagaattactggatgctattatcaaagacaacaagctgtat
ttacaggagcaggagcttaatgctcggacccatgctctccaggctccttcatcctcctcc
tcattcaggcccaacggttcagatgacaataacccaccggggagctgtggcccatctggt
ggaggtggagggggagggggcttcaacaccatcagtagactggtcttctga
DBGET
integrated database retrieval system
