Trematomus bernacchii (emerald rockcod): 117482071
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Entry
117482071 CDS
T09643
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117482071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117482071
04090 CD molecules [BR:
tben04090
]
117482071
04091 Lectins [BR:
tben04091
]
117482071
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
SIGLEC family
117482071
CD molecules [BR:
tben04090
]
Proteins
117482071
Lectins [BR:
tben04091
]
I-type lectins (Siglecs)
117482071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Ig_4
Ig_CD22
C2-set_2
PKD
K319L-like_PKD
Ig_6
Motif
Other DBs
NCBI-GeneID:
117482071
NCBI-ProteinID:
XP_033985959
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MVPPSLLTEMRGAAMSLTAAASGLVVFLLSVSVVQGVHDWGVSYSPTEICAAKGSTVEIR
CNFTYPSTWRGSVNTVEKTFWFTKWKDGVHVDLTTVSEYAGRVEDLCENNTCTLRIRNLT
ESDSAEYKFKFETNQGGKYSGSPGVTLSVSNLQVTSGTNRLYCQSSCHQYSYPSYIWYKN
GQSIQGETADYTSNPNNADSYSCALKGYEDFPSPPVYAPKPPSVSVSPSAEIEEGSSVTL
TCSSDANPAASYTWYKKNGNQKRPPLTTEPQLVFSSIQSSDSGQYFCKAENELGKITSKV
NSVDVKYPPKLPSVSVSPSAEIEEGSSVTLTCSSDANPAANYTWYKEDEDSPKASGQIFT
ITDFRAEHSGSYSCGAQNKLGRSNSTFHLSVVAGSSTMIVNIIRMTLGVLMLIPVFLLGL
WTRKKKALRSTTEACEPVEIELDSIPEYENVSHTAAQTEDRE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttcctccttcacttctcacagagatgagaggagcagctatgagtctaactgcagca
gcgagtggattagtcgtcttcctgctctctgtgtcagtggttcagggagtgcatgactgg
ggagtgagttactctcctactgagatctgtgcagcgaaaggatcaacagtggagataaga
tgcaacttcacatacccatctacatggagaggcagtgttaacacagtggagaaaacattc
tggttcactaaatggaaagatggtgtacatgtagatctgaccacagtctcagagtatgca
ggtcgtgtagaggatctctgtgaaaacaacacctgcactctgagaatcagaaacctgaca
gagagcgactcagctgagtacaagttcaagtttgaaacaaaccaaggaggaaaatatagt
ggttcacctggagtcactttgtccgtctcaaatctccaggtcacatcaggtacaaacaga
ctgtattgtcagagcagttgtcatcaatattcttatccttcctacatctggtacaagaac
ggacaaagtattcagggagaaacagctgattatacaagcaacccgaacaatgcagacagt
tattcctgtgctttgaagggatatgaggactttccctctcctccagtgtatgctccaaag
cctccctctgtgtcagtgagtccctctgctgagatagaggagggcagttcagtgactctg
acctgtagcagtgatgctaacccagcagctagctacacctggtacaagaagaatggaaat
cagaaacgtcctcctctcactacagaaccacagcttgtcttcagctccatccagtcctct
gactctggacagtatttctgtaaagctgagaacgagctggggaagatcacatcaaaagtg
aactctgttgatgtgaaatatcctccaaagcttccctctgtgtcagtgagtccctctgct
gagatagaggagggcagttcagtgactctgacctgtagcagtgatgctaacccagcagct
aactacacctggtacaaggaggatgaagactctccaaaagcttcaggacagatcttcacc
atcactgacttcagagctgaacacagtgggagttattcctgtggagcccagaacaagtta
ggacgtagtaactccacctttcatctgagtgttgtggcagggagttcaacaatgatagtg
aatatcatcaggatgactctgggggtcttgatgctgattcctgtgtttctcctgggtctg
tggacgaggaagaagaaagctctgaggtccaccactgaagcatgtgaacctgtagagata
gagttggactctattcctgagtatgagaacgtctcacacactgcagcacagacagaagac
agagagtag
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