Trematomus bernacchii (emerald rockcod): 117482077
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Entry
117482077 CDS
T09643
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117482077
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117482077
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
Prok-RING_4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_5
PEHE
zf-rbx1
zf-ANAPC11
zf-RING_6
zf-Nse
FliD_C
PhageMin_Tail
DUF5401
DUF771
DUF4618
UPF0242
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
117482077
NCBI-ProteinID:
XP_033985967
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MASKLEQDLCCPVCQEVCRDPVILSCGHSFCKACLQTWWDGKEVKECPFCKRRISKDPPY
NFALKNLCETFLQERDQRPPEALCSLHSEKLRLFCLDHQQPVCLICRDSKTHTNHRFRPI
DEAAQDLREELQKSLQPFQEKLKLFEEVKVEFDQTAGHMKVQAQHTETQIKEQFKKLHQF
LEEQEEARMAALREEEEQKRKMMEEKMEAVSREIAALSNTVRATEEELRDEDVSFLHNYK
AAVERLQRPLLEDPQLPSGALIDQAKHLGNLSFNIWSKMKDMVSYSPLILDPNTANPFLI
LSEDLTRVRQGGRQKLPDNPERFDRYGFVLGSEGFNSGTHSWDVQVTDSTLWALGVSAES
AQRKGDTQSGLWRICFYKGKYTARPPSAPDTPLRLKKKLQRLRVDLDWNRGKLSFSDPDT
NTHIHTFTHTFTEKMFPYINTVEEVKILPLKVCVTVDQSR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagttagagcaagatctctgctgtccggtctgtcaggaagtctgtagagat
cctgtcattctgtcctgcggccacagcttctgtaaagcctgtctgcagacctggtgggat
gggaaagaagtgaaggagtgtccattttgtaagagaagaatctcaaaagatccaccttat
aactttgctttaaagaacctgtgtgagaccttcttacaggagagagatcagagacctcca
gaggctctctgcagtctgcactctgagaaactcagactcttctgtctggaccatcagcag
ccagtgtgtctcatctgcagagattcaaaaacacacaccaaccacagattcagacccatc
gatgaagctgctcaggatctcagagaggagctccagaagtctctgcagccctttcaggag
aaactgaagctctttgaagaagttaaagtggagtttgatcaaacagcaggacacatgaag
gtccaggctcaacacacagagacgcagatcaaggagcagtttaagaagcttcaccagttt
ctagaagagcaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagg
aagatgatggaggagaagatggaggctgtgagcagagagatagcagctctttccaacaca
gtcagagccacagaggaggagctgagagatgaagacgtctccttcctgcacaactacaag
gctgcagtggagaggctgcagcgccccctgctggaggatccacagctgccctcaggagct
ctgatagaccaggccaaacacctgggcaacctcagcttcaacatctggagcaagatgaag
gacatggtgtcctactctcctctcatcctggacccaaacactgctaatccattcctcatc
ctgtctgaagatctgaccagagtgagacaaggagggagacagaaacttcctgataatcca
gagaggtttgatagatacggctttgttctgggctctgagggctttaactcagggactcac
agctgggatgtccaggttacagacagtacactctgggcactgggtgtgtcagcagagtct
gcccagaggaagggagacacacagtctggattatggagaatatgtttctataaaggtaaa
tacacagcacggccaccatcagctccagacactcctctccgcctgaagaagaagctccag
aggctcagagtggatctggactggaacagaggaaagttgtcgttctctgaccctgacact
aacacacacatacacaccttcacacacactttcactgagaagatgtttccatacattaac
actgtggaggaagtgaagatattaccgctgaaggtgtgtgtgacagtggatcagagcagg
tag
DBGET
integrated database retrieval system