KEGG   Trematomus bernacchii (emerald rockcod): 117482077
Entry
117482077         CDS       T09643                                 
Name
(RefSeq) nuclear factor 7, brain-like
  KO
K12012  tripartite motif-containing protein 35
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117482077
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117482077
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4 zf-B_box Prok-RING_4 zf-C3HC4_3 zf-C3HC4_4 zf-C3HC4_2 U-box zf-RING_2 zf-RING_5 PEHE zf-rbx1 zf-ANAPC11 zf-RING_6 zf-Nse FliD_C PhageMin_Tail DUF5401 DUF771 DUF4618 UPF0242 Exonuc_VII_L
Other DBs
NCBI-GeneID: 117482077
NCBI-ProteinID: XP_033985967
LinkDB
Position
Unknown
AA seq 460 aa
MASKLEQDLCCPVCQEVCRDPVILSCGHSFCKACLQTWWDGKEVKECPFCKRRISKDPPY
NFALKNLCETFLQERDQRPPEALCSLHSEKLRLFCLDHQQPVCLICRDSKTHTNHRFRPI
DEAAQDLREELQKSLQPFQEKLKLFEEVKVEFDQTAGHMKVQAQHTETQIKEQFKKLHQF
LEEQEEARMAALREEEEQKRKMMEEKMEAVSREIAALSNTVRATEEELRDEDVSFLHNYK
AAVERLQRPLLEDPQLPSGALIDQAKHLGNLSFNIWSKMKDMVSYSPLILDPNTANPFLI
LSEDLTRVRQGGRQKLPDNPERFDRYGFVLGSEGFNSGTHSWDVQVTDSTLWALGVSAES
AQRKGDTQSGLWRICFYKGKYTARPPSAPDTPLRLKKKLQRLRVDLDWNRGKLSFSDPDT
NTHIHTFTHTFTEKMFPYINTVEEVKILPLKVCVTVDQSR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggcgtccaagttagagcaagatctctgctgtccggtctgtcaggaagtctgtagagat
cctgtcattctgtcctgcggccacagcttctgtaaagcctgtctgcagacctggtgggat
gggaaagaagtgaaggagtgtccattttgtaagagaagaatctcaaaagatccaccttat
aactttgctttaaagaacctgtgtgagaccttcttacaggagagagatcagagacctcca
gaggctctctgcagtctgcactctgagaaactcagactcttctgtctggaccatcagcag
ccagtgtgtctcatctgcagagattcaaaaacacacaccaaccacagattcagacccatc
gatgaagctgctcaggatctcagagaggagctccagaagtctctgcagccctttcaggag
aaactgaagctctttgaagaagttaaagtggagtttgatcaaacagcaggacacatgaag
gtccaggctcaacacacagagacgcagatcaaggagcagtttaagaagcttcaccagttt
ctagaagagcaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagg
aagatgatggaggagaagatggaggctgtgagcagagagatagcagctctttccaacaca
gtcagagccacagaggaggagctgagagatgaagacgtctccttcctgcacaactacaag
gctgcagtggagaggctgcagcgccccctgctggaggatccacagctgccctcaggagct
ctgatagaccaggccaaacacctgggcaacctcagcttcaacatctggagcaagatgaag
gacatggtgtcctactctcctctcatcctggacccaaacactgctaatccattcctcatc
ctgtctgaagatctgaccagagtgagacaaggagggagacagaaacttcctgataatcca
gagaggtttgatagatacggctttgttctgggctctgagggctttaactcagggactcac
agctgggatgtccaggttacagacagtacactctgggcactgggtgtgtcagcagagtct
gcccagaggaagggagacacacagtctggattatggagaatatgtttctataaaggtaaa
tacacagcacggccaccatcagctccagacactcctctccgcctgaagaagaagctccag
aggctcagagtggatctggactggaacagaggaaagttgtcgttctctgaccctgacact
aacacacacatacacaccttcacacacactttcactgagaagatgtttccatacattaac
actgtggaggaagtgaagatattaccgctgaaggtgtgtgtgacagtggatcagagcagg
tag

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