Trematomus bernacchii (emerald rockcod): 117482196
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Entry
117482196 CDS
T09643
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117482196 (lrba)
Membrane trafficking [BR:
tben04131
]
Endosome - Lysosome transport
Others
Others
117482196 (lrba)
Endosome - Golgi transport
117482196 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117482196 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_1st
SUKH_6
EIF3I
Motif
Other DBs
NCBI-GeneID:
117482196
NCBI-ProteinID:
XP_033986101
LinkDB
All DBs
Position
Unknown
AA seq
2968 aa
AA seq
DB search
MASEETAGSADAQDGTTGAMALNPGVPIRGIKMKFGVLAGLVEVGEVSNRDIVETVFNLL
VGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEIWSIFTAILKKSVRNLQACTEVGL
IQLVLHRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAVKLLSV
LKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDKPY
LYCFRTNKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVYNRWKN
SEISCFVNGELASFGDIAWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFGEALSA
AQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFAYNPRATDAQLCLE
SSPKDNTSIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSSHEL
DTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIALAFSR
YLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNTIRRVGT
VLQVMHTLKYYYWIINPQDRSGVVPKGMDGPRPNQKEILSLRAFLLLFVKQLIMKDHGVK
EDELQSILNYLLTMHEDDNLMDVLQLLVAVMSEQPGSMVQAFDQRNGIRVIYKLLASKSE
GIRVQTLKVMGYFLKHLPPKRKPEVMMSHGLFSLLTERLMLHSGKFTMTTYNVLFEILTE
QICTQVIHKQHPDPDSTVKILNPQILKVIAALLKASPPSPESMEVRKVFLSDMIKLFNNS
RENRRSLLQCSVWQEWMLSLCYIHPQNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWV
DTLSITHSKVTFEQHKENLSHMFRQYQHQGSTGSMSSIRTISGVSQRSDTMECVNGTPAE
ETAPSTVIELTVDELSHKSPDTASGSTITSSPPEAAEGSGHASITVSNILARDDDDEEEE
EEEEEEEEQQQQQQVVEESSKDGSGDEGKETVTQTDDNEEQSEETNKEEQETSTDKSSDD
LQTSVSEADDTNATEGVRDSATPSASDDAQTSATDDDKSEPIKGESSTSTPEDSLNEADT
EVPEVSEQDDNKDQTYPESAVCLENSVQGGGDSVFNEDLADMSSVSDQIPPSDADDSQEE
SSYASAVAGEEEEVRQKEEAKDDDDEGKDDHQEGHEIKTDEDSDEKQEVESQGEVEEESE
AEEKQVSGLESETSLTETPEQSETEAPEDDQSSSITEPATPDQQPSDATPTSTAQEVAAA
SDPPSPSQPLETTSTTEEETLPAPTDSSAAASTSDAQKTADPVSKTKEIKIARLDVSNVA
FDTERLELKETSTTETSQGQPPAAAAAAAAAAAAAAGGSAGQQREGSNPAPRSTMFRIPE
FRWSHMHQRLLADLLFSIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHIISQVVDNL
IMACGGILPLLSAATSSSHELENIEPSHGLTVEASVTFLHRLINLVDVLIFASSLTFTEI
EAEKNMSSGGILRQCLRLVCAMAVRNCLECQQAQCSHGAEASARSYTAMPNMGAAMSAAA
QSPVDAVTGGMSPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVS
KYRDILEPQNDKKRPQRSQSSRSTDSGAISGGLEVENGVSLRRYDSGIGDDHTSVAASEA
DLSSSGVTHGPDAISEALSTLSSEVRPSLPTDSKGKNVKDILRSLVSAPADDMMVDPSLL
PPTFLGSVGDAARDSSRQFRSFDRSVVVAPKKTGMAPSAGASTSVPSATAASVSAGTPID
SVAMVSSGDASQSTSAATGGQVPASASLPSVPPLSPVTQNTAPNMSISERLENALEKAAP
LLREIFVDFAPFLSRTLLGSHGQELLIEGTSLMCMKSSSSVVELVMLLCSQEWQNSIQKN
AGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESNCAQYAAEKR
DEEKMCDHLIRAAKYRDHVTATQLVQKIVNILTDKHGAWGSSAKSRPREFWRLDYWEDDL
RRRRRFIKNPSGSTHSEATLKAAGEHVADISASEEDILKGKQSIRSQALGNQNSESETSL
DGDDDTLSSPEEKDLENFTGPVNLSTSAQLVAPAVVVKGTLSITPSELYFEVDEDDPSFK
AIDPKILSYTEGLHGKWLFTEIRAVFSRRYLLQNTSLEIFMANRTAVMFNFPDAATVKKV
VHSLPRVGVGTNFGLPQTRRISLATPKQLFKASSMTQRWQRREISNFDYLIFLNTISGRT
FNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQV
PKFHYGTHYSTSSFTMMWLLRIEPFTTFFLNFQGGKFDHADRTFSSVARAWRNCQRDTSD
VKELIPEFYYLPEMFVNANSYNLGVMEEGAMVSDVELPPWAKSPEEFVRNNRLALESEFV
SCQLHQWIDLIFGYKQQGPEATRALNVFYYLTYEGAVNLSSITDPMLREAVESQIRSFGQ
TPCQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVTHIAANTQPGLTSPAI
ITVTANRIFAVNKWYGLTGHQSSTVQDQQYQLPVEIDPLIASNVGSHRRQISDLLDQSIQ
ISSQCFIITADNRFILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDC
YILSGSRDATLLLWYWNGKHNSIGESPGTEFTTPRAILTGHDCEVTCASVCAELGLVISG
CKEGPCLIHSMNGDLLRTLEGPERCLRPRLIQSSTEGHCMIYYEKGQFCNFSVNGKLLRH
MEVEDSIKAMYLSRDGQYLLTGGDGGVVSVWQVHNFKQLFTYPGCDAGIRSMTMSHDQRC
IITGMSSGSIVLFYNDFNRWHHEYQTRY
NT seq
8907 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggctctgcggatgctcaggacgggactacaggagccatg
gcgctcaaccccggagtgcctatccggggaataaagatgaaattcggcgtgctcgctggc
ctggtggaagttggggaagtttccaaccgggatatcgtggagacggtgttcaacctgctg
gtgggaggccagtttgaccttgagatgaacttcatcatccaagaacccgagagcatcgtg
tgcatggtggagcttttggacaagtgtgagcccacctgtcaggcagagatctggagcatc
ttcaccgccatcctcaagaagagcgtgcgcaacctgcaggcgtgcactgaagtggggctc
atccagctggtgctgcatcgcatatccaccactgacagcatgatcgcagacctactggtg
gacatgttgggcgtgctcgccagctacagcatcacagtgaaagagctgaagcttttcttc
agcaaactgcaaggggagaagggccagtggcctcgccacgcagtgaagcttttgtcagtt
ctgaagtacatggctcacaggaacggccctgactcattcttcagtttcccggggaagaac
gcagctgctatagctctgcctcctatagcaaaatggccgtaccagaatggctttacattc
cacacgtggctccgcatggatcctctcaacaacatcaatgtagacaaggacaagccttac
ctgtactgtttccgcaccaataaaggcatgggttactctgcacactttgtgggtggctgt
ttgatagtgacctcattaaaatccaaggggaaagggttccagcactgtgtaaagtacgac
ttcaaaccacagaagtggtacatggtgaccctcgttcatgtgtacaaccgctggaaaaac
agtgaaattagctgctttgtgaacggggaactggcttcctttggagacatcgcctggttt
gtcaacaccagtgacacatttgacaagtgtttcctgggatcgtcagagacggcagatgtc
aaccgtgtgttctgcggacagatgggagcagtgtacctgtttggagaggctctcagcgct
gctcagatcctggccatctatcagctggggccggggtaccagggcacattcaagtacaag
gctgagagtgacttgctgtttgcggagcatcataagaccttactgtatgatggcaagttg
tcctccagcatcgccttcgcttacaaccctcgcgccaccgatgcccagctctgccttgag
tcctcccccaaggacaacacatccatatttgttcactcaccccacgcgctcatgctgcag
gacgtgaaggccgtggtgactcactcagtccagagcggcattcactccatcggaggcgtg
caggtcctcttccctctgtttgcacagctggattactgccagccctccagccatgagctg
gacacctctgtctgctgcactttgttatcctttgtgatggagctcttgaagaactcagtg
gctatgcaagagcaagtccttgcctgcaaaggctttctcgtcatcggctacactttggag
aagtcttccaaggtgcatgtgacgcggcccgtcctggacattgcgctggccttttccagg
taccttagcaacttgcagaatggcatcctgctgctcaagcagctgtgtgaccacattctg
ttcaaccccgccatctggatccatgcccctgccaaggtgcaactgacactctacacttac
ctggcaacggagttcatcagcacagtgaccatctacaacaccatccgcagggtgggcacg
gtactgcaggtcatgcacacactgaaatactactactggatcatcaacccccaggaccgc
agtggagtcgtgcccaaaggcatggatggtccgagaccaaaccagaaggagatcctctct
ttgcgagcctttctgctgttgtttgtcaagcagctcataatgaaggatcatggagtgaag
gaagacgagctgcagagtatcctcaactacctcctgaccatgcatgaggatgacaatctc
atggacgtgctgcagttgctggtggctgtgatgtctgagcagccggggtccatggtccag
gccttcgaccagcgcaacgggattcgtgtgatttacaagcttctggcctcaaagagtgaa
ggaattagagtacagaccctgaaagtaatgggatactttctgaaacacttgccaccaaag
aggaaacccgaggtcatgatgagtcatggccttttctccctgctcactgaacgcctgatg
ctccactccggcaagttcaccatgacaacctacaacgtgctgtttgagattcttactgag
cagatctgcactcaagtgatccataaacagcatccggaccccgactccactgtgaagatt
ctcaacccacaaattctgaaggtaatagctgctctgctgaaggcctcacccccgtccccc
gagagcatggaggtgcgcaaggtcttcctgtcggacatgatcaaactgttcaataacagc
cgagaaaaccgaaggagcctgctgcagtgctccgtgtggcaggagtggatgctctctctg
tgctacatccaccctcagaacagcgaggagcagaaaatcacagagatggtgtacgccatc
ttccgtatcctcctctaccacgccatcaaatacgagtggggtggctggcgggtctgggtg
gacaccctgtccatcacacactccaaggtgaccttcgagcagcacaaagagaatctgtcc
catatgttccgtcagtaccagcatcaggggtccacaggctctatgagctccatcagaacc
atctctggtgtcagccaaagatcggacaccatggagtgtgttaacgggacccctgcagag
gagacggccccttccacagtcattgagctcacagtggacgagctgtcccacaagtccccg
gacacggcatctggctccaccattacctccagcccaccagaggctgctgagggaagtgga
cacgcatccatcaccgtgtccaacatcctggccagggatgatgacgacgaagaagaagaa
gaagaagaagaagaagaagaagagcagcagcagcagcagcaggttgttgaggagtcttcc
aaggatggctcaggtgatgagggaaaagagactgtgacacaaacggacgataacgaggaa
cagagtgaagagaccaataaagaagaacaggagacttccactgacaagagctccgatgat
ctgcaaacatccgttagcgaagcagatgacacaaacgcaacagaaggggttagagactct
gctacaccatctgcaagtgatgatgcacaaacatctgcaacagatgatgacaagtctgaa
cctatcaaaggggaatcatcaacctccaccccagaagactctttgaatgaagcagataca
gaggtgcccgaggtttcagaacaagacgataataaggaccaaacgtaccccgagtcagcg
gtctgtctggagaacagtgtgcagggaggaggagactccgtcttcaacgaggacctggct
gacatgtcctctgtcagcgaccagatccccccaagtgatgctgatgatagccaagaagag
tcctcttatgcctctgcagttgccggagaggaagaggaggtaagacaaaaggaggaagct
aaagatgacgatgatgaaggcaaggatgatcatcaggaaggtcatgagataaagacagac
gaagacagtgatgagaagcaggaggttgaatcacaaggagaagtggaagaagagagtgaa
gctgaagagaaacaggtgtctggattggagagtgagacttctctgactgaaacacctgaa
cagagtgagacagaagcacccgaagatgaccagtcttcctccataactgaacccgctaca
ccagaccagcagccttctgatgccacaccaacctctacagcccaggaggtcgcagcagcc
tcagaccccccctcacctagccagcctttagagaccaccagcaccactgaagaagaaacc
ctgcccgctcccacagatagcagcgctgccgcctccacctctgacgcacagaagactgca
gaccctgtcagcaagaccaaagagatcaaaatcgcccgactggacgtgtccaatgtggcc
ttcgacacggagagacttgaattaaaggagacctcaactacagaaacaagccagggccag
cctccagcagcagcagcagcagcagcagcagcagcagcggcagcagcgggggggtctgca
ggtcagcagagagagggcagcaatccggcccctcgctccaccatgtttcgtatcccagag
ttccgctggtcccacatgcaccaacgcctcctggctgacctgctcttctctattgagaca
gatgtgcagatgtggaggagccactccacaaagactattctggactttgtgaacagcagc
gagaacgtggtgtttgtccacaacagtattcacatcatctcccaggtggtggacaacctc
atcatggcctgtggaggcattctacctctgctctctgctgccacctcctcctctcatgaa
ctggagaatatcgaaccctcccacggtctgacggtggaggcttcagtcaccttcctccac
cgcctcatcaacctcgtggatgttctcatctttgccagctcccttaccttcacagagata
gaagctgagaagaacatgtcgtcgggaggcatcctgcgacagtgccttcgcctcgtttgt
gcgatggctgttagaaactgtctggagtgtcagcaagcccaatgcagtcacggtgcagaa
gcctccgcacgcagctacacagccatgcccaacatgggagcagccatgtctgcagctgca
cagagtcctgttgatgcagtgacaggtgggatgtctccagtcagagacctggaccggctt
ctgcaggacatggacataaaccgcctcagggctgtcgtcttcagagatatcgaggacagt
aagcaggctcagtttttggcgcttgctgttgtctacttcatctcagtcctgatggtgtcc
aagtaccgcgacatcctggagccccagaatgacaagaaacgccctcagaggtcccagtct
tccaggagcacagatagcggtgccatttctggtggactcgaagtggagaacggtgtctct
ctccgacgttatgattctggcatcggggatgaccacacttcggtggccgcgagcgaggcg
gacctttcctcctccggcgtgactcacggcccagacgccatctcagaggccctgtctacg
ctgtcctctgaggtcagaccttctctgcccactgattcaaagggcaagaatgtgaaggac
attctgcgcagcctggtgagcgctccagctgatgacatgatggtggacccaagtctgctg
ccaccgacgttcctaggaagtgtgggcgatgcggccagagactcatctcgacagttccgc
tcatttgataggagtgttgtcgttgcacctaagaaaactggcatggcaccgtctgcaggc
gcttccaccagcgtcccatcagccactgctgcgtctgtgtctgccgggacacccatcgac
agcgtcgccatggtatcttctggagacgcctcccagagcacctctgcagctacaggcggc
caggttccagccagcgctagcctgccatctgtccccccactctcccctgtgacccagaac
acagcccccaatatgagtatctcagagcgtctggagaatgccctggagaaggcagctcct
ctgctgagagagatcttcgtggactttgctcccttcctctctcgaactctgctgggtagc
cacgggcaagagctcctcattgagggcacaagcctgatgtgtatgaagtccagcagctcg
gtggtggagctcgtcatgctcttgtgttcacaggaatggcagaactccatccagaagaat
gcaggtctcgccttcatcgagttggtcaacgaaggcaggctgctgagtcacaccatgaag
gaccacctggttcgtgtggctaatgaagctgaattcatcctcagccgacagagggctgaa
gacattcacaaacatgcagagtttgagtcgaactgtgcgcagtacgcagcggagaagcga
gatgaggagaaaatgtgcgaccacctgatccgagcagccaagtaccgcgaccatgtgacc
gccacgcagctcgtccagaagatagtcaacatcctgaccgacaaacacggagcctgggga
agctcggccaaaagccggccgagggagttctggcgcctggactactgggaggacgattta
aggcggcgacgtcgcttcatcaagaacccctccggatccactcactcagaggctacgctc
aaagcagcgggcgaacacgtggctgatatcagtgcatccgaggaagatattctcaaagga
aagcagtccatcagaagtcaggctctgggaaatcaaaactctgagagtgagacgtcactc
gacggagacgatgacactctgtcatctccagaggagaaggacctggagaactttacaggc
ccggtaaacctgagcaccagtgcccagctggtggctccggctgtggtggtgaaaggcacc
ctgtccatcaccccctccgagctctacttcgaggtggacgaagacgatccgagcttcaag
gccatcgatccaaagattttatcctatacagaaggtcttcatggaaaatggctgttcaca
gagatcagagccgtcttttccagacgctacctactgcagaatacttctctggaaatcttc
atggccaacagaacggcagtcatgttcaacttcccagatgcggccacagtcaagaaggtg
gtccacagtcttccacgtgttggggtgggcacgaactttggccttccacagaccagacgt
atctctctggccacaccaaagcaacttttcaaggcatccagcatgacccagcgctggcaa
cgccgcgagatatccaactttgattaccttattttcctcaacaccatctctggtcggacc
tttaatgacctgaatcagtacccagtcttcccctgggtgatcaccaactacgactcagag
gaacttgacctcactctgcccagcaacttcagagatctgtccaagcccattggtgctctg
aaccccaagagagcagccttcttctcagaccgatacgagtcctgggaggatgatcaggtg
ccgaagttccactatggcacccactattccacctccagcttcaccatgatgtggctactg
cgtatcgaaccctttaccacattcttcctaaacttccaaggaggaaagtttgaccatgct
gaccgcaccttctcctcagtcgcccgggcatggaggaactgccagagagacacctctgat
gttaaggagctgatcccagagttttactacctccccgagatgtttgtcaacgccaacagt
tacaacctgggagtgatggaggaaggcgccatggtctctgatgtggagctgccaccttgg
gccaagagcccggaggagtttgtgcgcaacaatcgcctggctctggagagcgagtttgtg
tcctgccagctccaccagtggatcgatctgatctttggctacaagcagcaaggacctgaa
gccaccagagctctcaatgtcttctattatctgacctacgaaggggccgtcaacctcagc
tccatcaccgaccccatgctccgagaggctgtggagtctcaaataaggagttttggacag
accccctgccagttgctcatcgagccacacccaccccgaagctcagccatgcaggtgacc
ccactgatgtttacggagcagatgcagcaggatgttatcatggtgctgaagttcccatcc
aactctcctgtgacccacatagcagccaacacccagccgggcctgacgtcaccggccatc
atcaccgtcactgcaaaccgcatcttcgctgtcaacaagtggtatggactgacaggtcat
cagagctcaacggtgcaggaccagcagtaccaacttcctgtggaaattgaccctctgata
gccagtaacgtgggcagtcatcgtcgtcagatctcagacctgctggatcaaagcattcag
atcagctcgcagtgtttcatcatcacagccgacaaccgcttcatcctcctgtgcggcttt
tgggacaagagcttccgggtttactccactgactcaggcaaactgacgcagatcgtgttc
ggacatcgtgacgtggtgacgtgtctggctcgctccgagtcgtacatcggaggagactgc
tacatcctgtcaggctccagagacgccaccctgctgctgtggtactggaacgggaagcac
aacagcattggagagagcccgggcacagagtttaccacaccgagggccatcttgacgggc
catgactgtgaagtgacgtgtgcgagtgtgtgtgcagagctgggtctcgtcatcagcggc
tgcaaagagggtccttgtctgatccattccatgaatggggacctgctgcggaccctggag
ggccccgagcgctgcctgaggcctcgtctcatccagtcctccaccgagggacactgcatg
atctactacgagaaggggcagttttgtaacttcagtgtcaacggcaaactgctcagacac
atggaggtggaagacagcatcaaggccatgtacctcagtcgggacggccagtacctgctg
acgggcggagacggaggcgtggtctccgtctggcaggtccacaacttcaaacagctgttc
acgtacccaggctgcgacgcaggaatccgctctatgaccatgtcccatgaccaaaggtgc
atcatcaccggcatgtcctctggaagcatcgtgctcttctacaacgacttcaacagatgg
caccacgagtaccagacccgctactga
DBGET
integrated database retrieval system
