Trematomus bernacchii (emerald rockcod): 117482208
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Entry
117482208 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta-like
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117482208
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117482208
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117482208
Enzymes [BR:
tben01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117482208
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117482208
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Type II RPTP family
117482208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
PTP-SAK
Tc-R-P
V-set
Interfer-bind
DSPc
Y_phosphatase3
PTPlike_phytase
Ig_C17orf99
C2-set_2
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
117482208
NCBI-ProteinID:
XP_033986122
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MHVTTYPMMHSASPGLLLLSFLFLADADSPPKFTRTPEDQTGVQGGVSSFVCQAAGDPQP
KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECHASNSAGEITASTRL
SVLREDQLPSGFPTIDMGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTSNNNG
RIKQLRSGGTPIRGALQIEMSEESDQGKYECVATNSDGTRYSTPANLYVRELREVRRVPP
RFSIPPADSEIMPGGNINITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELTDVRQ
SNNYTCVAMSTLGVIEAVAQIIVKALPKAPGNPVGRRETATSITLTWDSGNPEPVSYYMI
QHRAKGSEDPYKEIDGIATTRYSVGGLSPYSHYDFRVAAVNTIGQGPSSEVVEARTAEQA
PSSPPRQVRGRMLSTTTAIIHWDEPEEPNGQVVGYRVYYTSDNTLLVNQWEKQMVRSANF
ITIQSLTPNKTYYIRVMAFTSVGDGPLSQDLQIIAKTGVPSQPSDFKGEAMSETSIQLSW
VAPPQGGPDNQITGYELVYRRADDTEEKKVSFEPVTSYLLKNLKPFSTYTFQLAAKSKHG
IGAYTNEVSIDTPQTLPSAPPQDITCTSPSSTSILVSWAPPLLEFQNGVITGYSIQYSTT
EGNKMSKRVDGVPPESSSYLLENLEKWTEYGITVRAQTEAGDGPESLQLLIRTEEDVPSG
PPRGVEAETVNASAVRVKWRAPAPERQHGQVRGYQVHYVRMNNGEPQGQPFIKDILIEDS
QWEYDDSAEYEVILGDLKADTAYSVSVGAYTAKGDGARSKPVTVCSALPLPEKPKLTVSA
TDSGTALLQWYPPPNQPTPLLGHRLTFGRIDVLPFTVVEFPTKENSYTAQDVHKGANYVF
RLSSRNKMGYGEEAVKELTTPEDAPSGYPENIILEEAFATSLRLAWKSVPLIEQNGEIMK
YSVLFKDINSRGNASEVVVPNPGLSVLFEGLSADTVYDVRLCAFTAVGPGPYSPSVQFRT
QRLDQVFATNFKVKAAMKNSVLLSWEIRDKNPSQPFTILYGKGESVEVDGKLTQKLITGL
EPDTQYSFLLTNRANSAGGLQHRVTVTTAPDILKTKPMVVGKTNADGMVTVQLPTVQTTA
KVRGYYVVVVPLKKQRAGKFLNPWEEPDQMNLDELLKEINRTSVSRALRIRRQAGQSEPR
AYVSAHFKTLPLEFTLGDGRNYGDFRNRPLLNGQEYVFFVLALLDLSENTMYSTSPYSDP
VTSSDVDPQPIVDEEEGLLWVVGPVLAVIFIVCIVIAILLFKSKPDRKRAEAEGRKASFP
CSKAMSSHNPTDPVELRRINFQTPAYRVSVYRGYRRLSSMASHPPVPISELADHTERLKA
NDNLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILSSIEGVPGSDYI
NANYIDGYRRQNAYIATQGSLPETFGDFWRLVWEQHTANIIMMTKLEEKSRVKCDQYWPT
RGTETYGLIQVTLLDTVELATYSVRTFALYKSGSNEKREVRHFQFTAWPDHGVPEHPTPF
LAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDGMAERIKHEKTLDIYGHVTLMRSQ
RNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYSYIQRLTQIEPGENVTGMEVEFKRL
ASAKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCLQPIRGVEGSDYINASFIDGYRQQ
KAYIATQGPLAETTEDYWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVV
DPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTK
EQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPATVQTED
QYQFCYRASLEYLGSFDHYAT
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgacgacatatcccatgatgcactcggccagtccaggcctgctcctcctcagc
ttcctcttcctcgctgatgccgactcaccccccaagtttacaagaaccccagaagatcaa
acaggagtccaggggggagtgtcctcctttgtgtgccaggccgcaggggatccacagccc
aagattgtctggaacaagaaaggcaaaaaagtcagcaaccagagatttgaggtaatagag
tttgacgacgggtccggctcggtcctaaggatccagccgctaaggaccccgagagatgag
gctatttacgaatgtcacgcctctaactctgcaggagaaatcactgcttcaacccgactg
agtgtactaagagaggaccagctgccctcggggttccccaccattgacatgggtccccag
ctgaaagtggttgagcgttctcgaaccgccactatgctctgtgctgctagcggtaaccct
gacccagaaattacctggttcaaagatttcctgccagtcaacacgtccaataacaacgga
cgaatcaagcagctccgctcaggtggcacgcccatacgaggtgccctccagatagagatg
agtgaggagtccgaccaggggaagtacgagtgtgttgccaccaacagcgatgggacacgc
tattccacaccagctaacctctatgtccgagagctgcgagaagtgcgtcgtgtcccccct
cgcttctccatccccccagcggacagcgagatcatgccaggtgggaacatcaacatcacc
tgtgtggccgtgggctcccccatgccgtatgtgaagtggatgctgggagcagaagatctg
acgcctgaggatgacatgcccatcggccgcaacgtcctggaactgaccgacgtacgccag
tccaacaattacacatgcgtcgccatgtcgacacttggcgtgattgaggcggtggcacag
attattgtgaaagctctgccgaaggcccctggtaaccctgttggtcggagagaaactgca
acaagcatcactctcacctgggattctgggaaccctgagcctgtctcctactacatgata
cagcaccgtgccaaaggctctgaggacccctacaaagagattgatggcattgccacaacg
cgctacagcgtgggcggtctcagcccctactcccactacgactttcgggtggcggctgtc
aacaccatcggccagggcccctccagcgaggtggtggaggctcgcacagccgagcaggcc
ccctcctcaccgccccgacaggtcagaggtcgtatgctgagcaccacaacagcaatcatc
cactgggatgaaccagaggagcctaacggacaggtggtgggctacagagtctactacacc
tccgacaacacgctgctagtcaaccagtgggagaagcagatggtgcgcagcgccaacttc
atcaccatccagagcttgactcctaacaagacttattacatcagagtgatggccttcacc
tctgtaggagacggacctctgtcccaggacctgcagattatagccaagactggagttcca
tcccaaccatcagattttaagggtgaggccatgtctgagaccagtatccagctgtcctgg
gtggccccaccccagggtggccccgacaaccagatcacaggatatgagctggtgtaccga
cgagctgacgacacagaggagaagaaagtaagctttgagcctgtcacctcctacctgttg
aagaacctgaagcctttctccacctacaccttccagctggctgcaaagagcaagcatgga
attggggcgtacacgaacgaagtgtccatcgacacaccgcagacgcttccttcggcacct
ccccaggacatcacatgcaccagtcccagttctaccagcatcttggtaagttgggcccca
cctctcctggagtttcagaacggtgtcattaccggatactccatccagtactccactacc
gagggcaacaaaatgtctaaaagagttgatggagttcctccggaaagttcttcgtatcta
ctggaaaacctagagaaatggactgagtatggcattactgtacgggctcagacggaagcc
ggggatggaccagagagtttacagctgcttatccgcaccgaggaagatgttccaagtggt
cctccgcgaggggtggaggcagagactgtgaacgcctcggccgttagggtgaaatggcga
gcaccagcgcccgaacggcagcacggtcaggtccgaggataccaagtccactatgtgagg
atgaacaacggagaacctcagggtcagccgttcatcaaggacatcctcatagaggactct
cagtgggaatatgatgactcagctgaatatgaggtgattcttggagacctgaaggcagac
acagcctactctgtatcagtgggggcttacacggctaagggcgatggcgctcgcagcaaa
cctgttactgtctgtagcgccctgccattgcctgaaaaacccaaattgacggtgagtgcc
actgattcaggtactgctttgcttcagtggtacccacctcccaaccagcccacccctctc
ctcgggcaccgcctcaccttcggccgcatcgatgtccttcccttcacggtggtggagttc
ccgaccaaggagaacagctacaccgcccaggacgtccacaagggagctaactatgtgttc
agactctcctcccgtaacaaaatgggctacggagaggaggctgtaaaggagttgactact
ccggaagacgccccaagtggatacccagaaaatatcatcctggaggaggcttttgccacc
tcactccgactggcatggaaatcagtcccactcattgagcaaaatggggaaatcatgaag
tactcggtgctgttcaaggatataaacagtcgagggaacgcctcagaagttgtggtgccc
aatccagggttgagtgttttgttcgagggtctgagtgccgacactgtgtatgatgtcagg
ttgtgcgcgttcacagctgttggccctgggccgtacagccccagcgttcagtttaggacg
cagcggctagaccaagtttttgccaccaacttcaaagtgaaggctgccatgaagaactct
gttctgctgtcctgggagatccgagacaagaacccttcccagccatttactatcctgtat
ggaaagggcgagtctgttgaagtggatgggaagctgacccagaagctgatcactggcttg
gagccagacacgcaatactcctttttactcactaaccgggccaacagtgcgggggggctg
cagcaccgcgtcaccgtcaccaccgccccagacatcctgaaaaccaaacctatggtggtg
ggaaagaccaacgctgacggcatggtgacagtgcagctgcccactgtgcagaccaccgcc
aaagtcaggggttactacgtggtggtggtgccgctgaagaagcagagagcagggaagttc
ctgaatccctgggaggagcccgaccagatgaacctggatgagctcctgaaagagatcaac
aggaccagtgtcagtcgagccctccgcatccgcagacaggctggccaatcagaacctaga
gcttatgtcagtgctcattttaagaccctccccctggagttcacactaggagatggccga
aactacggtgacttccgcaaccgtccactgctgaacggacaggaatatgttttctttgtg
cttgcgctgctagacctctctgagaacactatgtactccaccagcccctattcggatcct
gtgacctcatcggatgtggaccctcagccaatcgttgacgaggaagagggtctactatgg
gtggttgggcctgtgttggctgtcatcttcatcgtctgcatcgtcatcgccattctcctc
ttcaagagcaaacctgacaggaaaagggccgaggctgaaggcaggaaagccagtttcccc
tgcagcaaagccatgtcgtcccacaatcccactgatcctgtggagctacgcagaatcaac
ttccagactccagcctaccgtgtatcagtgtaccgcggttatcgccgtttgtcaagcatg
gcaagtcacccgcctgtccccatctctgagctggcagatcacactgagcgcctcaaggca
aacgacaatctcaagttctcccaagagtacgagtccatcgaccccggtcagcagttcaca
tgggagaactccaacttggaggtcaacaaaccaaagaaccgctatgctaacgtcattgcc
tatgatcactccagagtcatactctccagcattgagggtgtcccaggcagtgactacatc
aatgcaaactatattgatggctaccgccgacagaatgcctatattgccacccaggggtcc
ctacctgagacttttggggatttctggaggttggtctgggagcagcacacagcgaacatt
ataatgatgaccaagctggaagagaaatcacgggtgaagtgtgatcagtactggccaacg
cggggcacagagacctacggcctcatccaggtcactctgctggacacagtggagctggcc
acctactctgtcaggaccttcgctctctacaagagcggctccaatgagaagcgtgaggtt
cgtcacttccagtttaccgcctggccagaccacggggtacctgaacatcccacccccttc
ctggccttcctacgcagggtcaaggcctgcaacccaccagatgcgggtccaatggtcgtc
cactgcagtgctggagtgggtcgcacaggttgcttcatagtaatcgacggcatggccgag
aggatcaagcatgagaagaccctcgacatctacggccatgtcacgctgatgcgctcccag
aggaactacatggtccagacggaggatcagtacatcttcattcatgacgcattgctggag
gccgtgacctgcgggaacacggaggtcccggccaggaacctgtactcctacatccagagg
ctgacgcagatcgaaccaggagagaatgtcaccggcatggaggtggagttcaagcgtctg
gccagtgccaaggcccacacatctcggtttgtgagtgccaacctgccatgcaacaagttc
aagaaccggctggtgaacatcatgccctacgagaccacacgtgtgtgtctgcagccaatc
agaggagtggagggatctgactacatcaacgccagcttcatcgacggatacaggcagcag
aaggcctacatagcaacccaaggcccgctggctgagaccacagaggactactggaggatg
ctgtgggaacacaactctaccatcgttgtcatgctaaccaaactgagagaaatgggacgg
gagaaatgtcaccagtactggcccgcagagcgctccgccaggtaccagtactttgtggtg
gatcccatggctgagtacaacatgccccagtacatcctccgagagttcaaagtcactgat
gccagggacggccaatcgcggacagttcgtcagttccagtttactgattggccagagcaa
ggagtgccaaagtcaggggagggattcattgatttcattggccaggtgcacaaaactaaa
gaacagtttggtcaggatgggccaattactgtgcactgcagtgctggagtagggaggacc
ggtgttttcatcaccctcagcatcgtgctggagaggatgaggtacgagggggtggtggac
attttccagaccgtcaagatgctgcgcacccagagacctgccaccgttcagacagaggac
cagtaccagttctgctaccgggccagtctggagtacctgggaagctttgatcactatgca
acataa
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