Trematomus bernacchii (emerald rockcod): 117482217
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Entry
117482217 CDS
T09643
Name
(RefSeq) neuronal-specific septin-3-like isoform X1
KO
K16938
septin 3/9/12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117482217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117482217
04812 Cytoskeleton proteins [BR:
tben04812
]
117482217
04147 Exosome [BR:
tben04147
]
117482217
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Sperm associated proteins
117482217
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
117482217
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117482217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AIG1
Dynamin_N
AAA_16
Ras
Roc
AAA_22
ABC_tran
NB-ARC
URGCP_GTPase
AAA_29
IIGP
FtsK_SpoIIIE
Ploopntkinase3
AAA_7
P-loop_TraG
G-alpha
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
117482217
NCBI-ProteinID:
XP_033986137
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MIENMSDSGVNPHLEGIISDFEALKRSFEVEDVDTSSHLSPGSRRTTSSPHRNAMSPTSI
YYRDLGTPPPAPATTTTTTTTNNNNLNFTQPRSIMGGGGSKTPEPVSRRSELSIDISSSS
SKQVDNITSPSSTRFATNSALKRPEVLGHTKTPEMSQKREVTFAKTPTDSPVIRRNEGNN
NNNGISRAPEQNHARKFEPPNPGDFRKPEISITRAPPENNGHHQPVHHPHHPNPHHSTIV
TTFRCSSPSHGRKSPNTDRSEVSVSHSNMSESAKPHHPSPQGKGEKTHASDFSYVGIDAI
LEQMRRKAMKQGFELNIMVVGQSGLGKSTLMNTLFKSKVSRKSVQPNPEERIPKTIEIKS
ISHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEAYLQEEININRKKRIP
DSRVHCCIYFIPPTGHCLRPLDVEFMRRLSKVVNIVPVIAKADTLTLEERDFFKQTIREE
LRANGIDVYPQKEFDEDADDRMINDKIREMIPFAVVGSDQEYQVNGKRILGRKTKWGTIE
VENIGHCEFAYLRDLLIRTHMQNIKDITGSIHYETYRVRRLNESNAHFKSQPSDHPAVQP
KANGQPEVTPSAPQANGVAAKHEVMSHEM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaacatgtcagattctggagtcaatccacacttggagggaattatttcagat
tttgaagctctgaagaggtcctttgaggtggaggatgtggacacttcctctcacttgtcc
cctggctcccgtcgaaccaccagctcccctcaccgtaacgccatgtctcccaccagcatc
tactaccgtgacctgggcactccccccccagccccggcaaccaccaccaccaccaccacc
accaacaacaacaacctcaactttacccaaccccgctccatcatgggtggaggaggctcc
aagacccccgagccggtgtctcgccgatccgaactctccatcgacatctcctcctcctcc
agcaagcaggtggataacatcaccagcccttcttccacacgctttgcaaccaacagcgcc
ctgaaacgccctgaagtcctgggccacaccaagacccccgagatgagccagaagagggag
gtcactttcgctaagacgcctactgattctccggtgatacgccgcaatgaaggcaacaat
aacaacaatggcatcagcagggcccctgagcagaatcacgctcgcaagtttgagcctcct
aatcccggagatttccgtaaacctgaaatcagcatcaccagggctcctccagaaaacaac
ggccaccaccaaccagtgcaccaccctcaccaccccaaccctcatcacagcaccatcgtc
accactttccgctgctcctcgcctagtcatggacgaaaatccccaaacactgacaggtca
gaggtcagtgtgagtcacagcaacatgtcggagtctgcaaagccccaccacccctcccca
cagggtaagggggagaagacccatgccagcgacttcagctacgtgggcatcgatgccatc
ctggagcagatgaggaggaaggccatgaagcagggcttcgagctcaacatcatggttgtt
ggtcaaagtggcctgggaaagtccactctgatgaacacactgttcaaatccaaggtgagc
cgcaaatcagtgcagcccaacccggaggagcggatccccaagaccatcgagatcaagtcc
atcagtcacgatattgaggagaaaggagtgaggatgaagctgacagtaatcgacactcca
ggctttggggatcacatcaacaatgagaactgctggcagcctattatgaagttcatcaat
gaccagtatgaagcctacctgcaggaagagatcaacatcaacaggaagaagaggatccca
gactccagggtgcactgctgcatatacttcatacctcccacgggccactgtctgcggcct
ttggatgttgagttcatgaggcgtctcagcaaggtggtcaacatcgtccctgtcatcgcc
aaggccgacacactcaccctggaggagagggacttctttaaacaaacgattagggaagag
ctgcgggccaatggcatcgatgtttaccctcagaaagagtttgacgaggatgcggacgac
aggatgatcaatgacaaaatcagggagatgatcccttttgctgtcgtgggcagtgatcag
gagtaccaggtgaacggaaaaaggattctgggaaggaaaacaaaatggggcaccatagaa
gttgagaatattggacactgtgagtttgcttacctgcgagacctcctcatcaggacacac
atgcagaacatcaaggacatcacaggcagcatccactatgagacgtatcgtgtccgccgg
ttaaatgaatccaacgctcatttcaaatcacaaccatctgaccatcctgctgttcagcca
aaggccaacggtcagcccgaggtgacgcccagcgctccgcaggccaacggagtggctgct
aagcacgaagtcatgtcccacgagatgtag
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