Trematomus bernacchii (emerald rockcod): 117482312
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Entry
117482312 CDS
T09643
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA2-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117482312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117482312
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
GGA
117482312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
Motif
Other DBs
NCBI-GeneID:
117482312
NCBI-ProteinID:
XP_033986287
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MATGDNTATFESWLNQATDPNNEQDRWDCIQSFYQLVDQETDGPQVAIRLLAHKIQSPQE
KESLQALTVLETCMNNCGKRFHSEAAKFRFLNELIKLLTPKYFGAWTPQKVKDRVTEILY
GWTLWLKEEPKILEAYGMLKKQGIVKKDPKLPDTLIMAPPTQRNKESVFDQEDKATLLAR
LLKSARPEDLETANRLIKSTIQEEQEKAEKVTKRESALQDVESSTKQLRVLLQQNTITGA
TQQPSDDMKALYERCDRLRPSLFRLASETMDEDVALVQILAANDELTLVVNDYKNKVGKR
ECNGGRERSRSEDEMERKNNAPKSPREIKSYHLIDLSALDSPQTHRKADSPPSFESSSPM
FPSFLESSFNSDADQDFNEPELKSNRVSKQETSRSYSEDLLQLNGEFQMNHAEQNGGRGV
VLRARGCGGSSATSNGTNIWSLPQHQQFTESGSLSENQKQLSEMSGSPEKKESLLTPQLL
KNIFVPVHSIKPSNLEPITVYDHGGVHVSLHFARDSPPGYPCVGVVVSSTVNTSALQVKD
FLFQAAVPKTMLVKLQPASGTHLPPYNPLLPPPAVSQVLLLDNPQKRKVRLRYKLTMTHG
DQHLNETGEIDNFPDWTSLIRH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagacaacacggcaacctttgagtcatggctcaaccaggccacagacccc
aacaatgagcaggacagatgggactgcatccagagcttctaccagctcgtagaccaagaa
actgacggaccacaggtagccattcgccttcttgcccataaaatccagtcgccacaggag
aaagagtctctgcaggctctcactgtcctcgagacgtgtatgaacaactgtgggaagagg
tttcacagcgaggccgccaagtttcgctttctgaacgagctcatcaaactgctgactcca
aagtactttggagcgtggactcctcagaaagtgaaggaccgagtgacggagatcctgtac
ggctggactctgtggctcaaagaagaaccaaagatcctcgaggcctacggcatgctcaag
aaacaaggtattgtaaagaaagaccccaaactgccggacacattaataatggcgcctccg
acacagagaaataaagagtccgtttttgaccaggaggacaaagccacgttattagccaga
ctgttgaaaagtgctcgtcctgaagacctggagacggccaacagactcattaagagcacc
atccaggaggagcaggagaaagcagagaaagtgacaaagcgagagtccgctctgcaggat
gtggagagcagcaccaaacagctccgagtgctcctgcagcagaacaccatcaccggagcg
acgcaacagcccagcgacgacatgaaggccctgtacgagcgctgcgaccggctgaggccc
agcttgttccgcctggccagcgaaacgatggacgaggacgtagctctggtgcagatcctg
gcggctaacgacgagctaacacttgtagtaaacgattacaaaaacaaagtggggaagaga
gagtgtaacggcggtagagaaagaagcagaagtgaggatgaaatggagcggaaaaataat
gctccaaagagtcccagagagattaaaagctaccacctcatcgacctgtcagcactggac
tctccacagacgcacagaaaagctgattcaccgccatcttttgaatcatcttctcccatg
tttccctctttcctggaaagtagctttaactcagacgctgaccaggacttcaatgagcca
gagttaaaaagtaatcgcgtctcaaaacaagagacttcacggtcgtactctgaagatctg
ctgcagctaaatggagagtttcagatgaatcacgctgagcagaacggaggcagaggcgtc
gttctgagagctcgtggatgtgggggcagcagcgcgacatcgaatgggacgaatatctgg
tcactccctcaacatcaacaattcacagagtcaggatcactgtccgagaatcagaaacaa
ctcagtgaaatgtcgggatctccagaaaaaaaggagagcttgttgacaccacaactatta
aaaaacatctttgttcccgttcactccatcaaacccagtaatcttgagccgatcactgtg
tatgatcatggcggcgtccacgtttctctacattttgccagagactctccgccgggctat
ccttgtgtcggtgtggtcgtctcctccaccgtgaacacatctgccctccaagttaaagac
ttcctgtttcaagctgctgttccaaagaccatgttagtgaagcttcagccggcctctggg
actcacctccctccgtacaaccctctgctgcctccacctgccgtctctcaggtcctcctg
ctggataaccctcaaaagcgaaaggtgcgtctacgctacaaactgacaatgacacatgga
gaccaacatctgaatgagaccggggagatcgacaactttcctgactggacctctttgatc
agacattga
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