Trematomus bernacchii (emerald rockcod): 117482326
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Entry
117482326 CDS
T09643
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117482326 (toporsa)
03036 Chromosome and associated proteins [BR:
tben03036
]
117482326 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117482326 (toporsa)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117482326 (toporsa)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117482326 (toporsa)
UBL E3 ligases
117482326 (toporsa)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117482326 (toporsa)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117482326 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
117482326
NCBI-ProteinID:
XP_033986308
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSAIKIALQQSQKKSRRKISEAMSADVSPDSKCPICLDIFNNISYLDICLHKFCFRCIHE
WSKNKAECPLCKQSFNSIYHSIKSEQDFKKYDLQPVESGSFGSFGGVRFRYRTTLTGVHR
QMRGRTSPPPDNGVMFEASANPPQQEQERYIRRMMKRLAAKRRAATEGRAVNTVRELEMV
NFRRELYRQGVRVRNVHDGGRSRETSAEFFRRNPACLHRLIPWLKRELVVLYGAHGSLVN
IVQHIIMSRITRYDMEDGAILEELRPFLQARTEHFIHEFMSFAKSPFNMEAYDQHAAYDC
PASSSNEDGSSNSSVIAISEDEEDLTEFDPPGDSTSTLRHSMWDDETPGPSYSTTAEQSR
PECLSVLDSDSDSSLEEDTRGLGASPHQMSPHSQTAATQGEVTIEECIFDISDDCIIVNV
VKPTAERTPELVQLSSDSDESADEDVKAVPLLPQHIRFSSLSPIPSQSSDPSRAGQLENV
ETDHYHQLVSKERCGSSTSSKYKTSSKSDRKDTDRRYDSRSRESRVSKDIEHRRKRRSRS
AERTHFTRSRSREKGYSPSGRDDSKSDRNYKKTDIDHRYKSSHNLHHTEKRSYSNRHSCS
RSPSRDSRRRERRHSPSRTYSSSSSPSTKKKSHNNKPGGKRKYKTRHLEDAASKTELSNS
IGEGDTPSLPRKEKKKSKEKSRKNSKDGSTGKTSRSLSVELVNEDNSQERSKRHHKKKKK
HKKKSKRHRSSERTGKHSPAVITIDSDSDSDTVANDNIPQDSSTKDNPIDNTTDDPVDPA
SPDSVE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaatcaagattgccctgcagcagagccagaagaagagcagaaggaaaatctct
gaagcaatgtctgcagatgtgtctccggactccaagtgtcccatttgtttggacatattt
aacaacatttcttacctggatatctgccttcacaaattctgtttccgctgcatccatgag
tggtccaaaaacaaagccgagtgccctttatgcaaacagtcttttaattcaatttatcac
agtataaaatcagagcaagattttaagaagtatgaccttcaaccggtagagagtggctca
tttgggtcttttgggggagtgcggtttagataccgcaccactcttacaggagtccatcgg
cagatgcggggaagaacctctccacctccagacaacggtgtaatgtttgaagcttcagct
aaccctccccaacaggagcaggagcgttacatccggcggatgatgaagaggttggcagcg
aagaggagagccgcaactgaaggcagggcagtgaacactgtccgagagctggaaatggta
aacttcaggagggaattgtaccgacagggagtgagggttcgtaatgttcacgatggtggt
cgctccagagaaacctcagctgaattcttcagaagaaatcctgcgtgcctgcatagactg
atcccctggctgaaaagagaacttgttgtgctgtatggggcccacggctctttggtcaac
atagtgcaacacatcatcatgtcgcgcattacacgttatgacatggaggatggagctatt
ctggaagagctcaggccgttcctccaggcgcgcacagagcactttatccatgagttcatg
agctttgcaaagtccccctttaatatggaggcctatgaccagcatgctgcctacgactgc
ccagcctcttcctcaaatgaagacggcagctccaattcatctgtaatagctatctcagag
gatgaggaagacttgacggagtttgaccccccaggagactccacgtctactctgaggcac
tccatgtgggatgatgagacgccggggccgtcttattctacgacagcagagcagagcagg
ccggagtgtctctcggtcctcgactcagactcagacagcagtttagaggaggacacacgt
gggttaggggcgtccccacatcaaatgagtcctcacagccaaacagcggcgactcagggt
gaggttaccattgaggagtgtatatttgatatcagtgatgactgtatcattgttaatgtt
gtcaagccaacagcagaaaggactcctgagctggtccagctctcctctgactctgatgag
tctgctgatgaagatgttaaagcagtgcctcttctacctcaacacatccgcttctccagc
ctcagtcctataccttcacagagcagtgatccaagcagggctggacagttagaaaatgtt
gaaacggaccactatcatcagttggtttcaaaagaaagatgtggctcttcgacatctagc
aaatacaagacatccagcaagtcagacagaaaagacactgatagaagatatgacagcaga
tccagggagagtcgcgtgtcaaaggacatcgagcacaggagaaagaggcgctcaagaagt
gcagagcgcacacactttaccaggagcagatctagagaaaagggttattctcccagtggc
agagacgactcaaaatctgatagaaattataaaaagacagacattgatcaccgctataaa
tcatctcataatctgcatcacacagagaagcggtcttactcaaatcggcactcttgctcc
aggagccctagcagggactcgcggagacgtgaaaggaggcattctccttccaggacttat
tccagcagtagctccccttcaacaaaaaagaagtcgcacaacaacaagccaggtggaaag
aggaaatacaaaacaagacatttggaagacgcagcaagcaaaaccgaactttccaactcg
attggagaaggtgacaccccctcgttgccaaggaaagaaaagaaaaagagcaaagagaag
agtcgtaaaaattccaaagacgggtcgacaggaaagacaagcaggagcctcagtgtggag
ctcgtcaacgaggataactctcaggagcgaagcaagcgtcaccataagaaaaagaagaaa
cacaagaagaaaagtaaaaggcacaggagcagtgaacgcacagggaagcactcgcccgct
gtcatcaccattgacagtgacagtgacagcgatacggttgccaatgataatatcccccag
gacagcagcactaaggacaaccccatcgacaataccacagatgacccagttgaccccgcc
tctccggactctgttgagtag
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integrated database retrieval system
