Trematomus bernacchii (emerald rockcod): 117482379
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Entry
117482379 CDS
T09643
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
tben03015
mRNA surveillance pathway
tben03040
Spliceosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117482379
09122 Translation
03013 Nucleocytoplasmic transport
117482379
03015 mRNA surveillance pathway
117482379
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117482379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117482379
03041 Spliceosome [BR:
tben03041
]
117482379
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117482379
TREX complex
117482379
Spliceosome [BR:
tben03041
]
Complex C
Other components
EJC/TREX
117482379
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117482379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
Motif
Other DBs
NCBI-GeneID:
117482379
NCBI-ProteinID:
XP_033986387
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MSDKMSMSLDDIIKLNKKGGGGGGGGGAGGRSSGQGGSSGRAGGSSRPARSRQNNFNRDR
NNRTTPYTRPRELPDKWQHDMFEEHAGGRRGQQSAVAERSVECNGKLLVSNLDFGVSDSD
VKELFAEFGDLLKASVHYDRSGRSKGTADVHFETNAAALKAMKHYNGVPLDGRPMKIQQL
TSDVDTQSRPSVQSSNGGFDRSRLGQPKFERSEKSDRGDRGERRERRQGGGGGGGGYRGR
GGRGGGGGGGREKRPQLSAEELDAQLDAYNAKMDTS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagatgagtatgtccctggacgacattatcaagttaaataagaaaggcggc
ggcggaggcggtggcggcggcgctggaggaagatcatccgggcagggtggaagttctggt
cgggccggtggatcttcaaggccggccaggagtcgacagaataacttcaaccgtgataga
aacaacagaacaacaccgtacaccaggcccagagagttgccagacaaatggcagcatgat
atgtttgaggagcatgctggtggacgcagaggacaacagagcgctgtggcagaaagaagt
gtagaatgtaacggcaagctgctggtatccaatctggactttggtgtctctgactctgat
gtcaaggaattgtttgcagagtttggagacttactgaaggcgtctgtacactacgaccgc
tctgggcgcagtaaaggaacggccgatgttcactttgaaactaacgcagcagcactcaaa
gccatgaagcactataacggtgtcccacttgacggccgtcccatgaaaatccagcagctg
acttctgacgttgacacacagagcagaccatctgtacaaagttcaaatggagggtttgac
cgcagcagacttggacagcccaagtttgaaaggagtgagaagagtgataggggtgatcgc
ggtgaaaggagagaaagaaggcaaggtggtggtggcggcggtggaggttacagaggaaga
ggagggcggggaggaggaggcggaggaggaagagaaaaaagacctcaactttctgcagag
gagcttgacgcccagttggatgcatacaatgccaagatggacaccagctaa
DBGET
integrated database retrieval system