Trematomus bernacchii (emerald rockcod): 117482390
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Entry
117482390 CDS
T09643
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04081
Hormone signaling
tben04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117482390 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
117482390 (smad1)
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GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
117482390
NCBI-ProteinID:
XP_033986395
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All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
VSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGAKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHTMLPRFRNPLQQNEPHMPQNATFPESFTQV
NPMPATFPTSPVNSYPSSPGSGSSSSATFPHSPSSTDPGSPFQMPDTPPPAYMPPEEQMT
QDIPQPMDTTLLAPTLPIESNNRPDVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSV
LVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIF
VQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRM
SFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctcgctcttctccttcaccagcccggcggtcaaacggctgctgggttgg
aagcagggagacgaggaagagaaatgggcggaaaaggccgtggatgctctggttaagaaa
ctgaaaaagaagaagggagccatggaggagctggagagggctctcagctgcccgggtcag
gtcagtaactgtgtgaccatcccccgctctctggacgggcggctgcaggtgtcccacagg
aaaggtctgccgcacgtcatttactgtcgggtgtggcgctggcccgacctgcagtcccac
cacgagctgaaggccctggagtgctgcgagttccccttcggcgccaaacagaaggatgtg
tgtatcaacccctaccactacaaacgagtggacagtccagtgctgccccctgtgttggta
ccgaggaacagcgagttcaacgccaagcatacaatgctgcctcgcttccgcaaccctcta
caacagaatgagccgcacatgccgcagaatgccaccttcccagaatcctttactcaggtc
aacccaatgcccgccacttttcccacctcgccggtaaacagctacccgagctcgccagga
agcggcagcagcagcagcgccaccttccctcattcgccatccagcacggaccccggcagt
cccttccagatgccagacacccctcctcctgcctacatgcccccagaggagcagatgacg
caggatatcccccagccgatggacaccaccctcctggctccaacattgcccatagagagt
aacaaccggccagatgtgcagccggtggcctacgaggagcccaagcactggtgctctatt
gtttactacgagctcaacaatcgtgtcggagaggccttccaggcgtcctccaccagcgtg
ctcgtagatggcttcacagatccctccaacaaccgcaaccgcttctgcctcggcctgctc
tcaaacgtcaaccgtaactccaccatcgagaacacccggcggcacatcggcaaaggtgtc
catctgtattatgtcggaggggaggtgtacgcagagtgtctgagtgacagcagtatcttc
gtccagagtcgtaactgtaactatcaccacggcttccatcccacaaccgtgtgtaagatt
cccagcggctgcagcctgaaaatcttcaacaaccaggagtttgctgagctgctggcccaa
tccgtcaaccacggcttcgaggccgtctacgagctcaccaagatgtgtaccatccgcatg
agcttcgttaagggctggggagcagagtaccaccgtcaggatgtgaccagcacaccctgc
tggattgagattcacctgcacggccccctgcagtggttggataaggtgctaacccagatg
ggctccccccacaaccccatatcctccgtctcctag
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