Trematomus bernacchii (emerald rockcod): 117482483
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Entry
117482483 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117482483
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117482483
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117482483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117482483
NCBI-ProteinID:
XP_033986463
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MPIAAAGQPTTLEPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSHSGARGFVQPGSTNGSPPQSPAASSSFLFHPLHPHQMAMEPPRTRSRSRSGYYQQYG
GGNGNGITGSGVMGSNHHHHHHQQQQQQQLHPQQHGAGCAPLGAHSNHPENQPRAPGSNA
SPGIQRLSSVPGAHRIPAEGASGGSYHCHPDHAYGDESDKSEESPSPKRQRLSSQSVLEQ
LTSAVPPPTTPSPPIRPWESGPPSRRQPHPHAHYHQERCLTPARLRRSPPARRQRGRLSR
PPRHLPPHHHSTQGPAPRLSPSEHQDENYHHHPPTHQTYTTHTPSVYSQPPTAGGGAVGL
EEPRAFHPPTLPRLLHPAAHHHHPYHHHQQQQQHHQQQHHQQQHHQQHHHAAQQQQGAMV
MDLHEQLQQASLPVSYTVNPVPPHSLAAPLCSGQHLPPTCSSQQVPACSVVFSTGQHYHP
MLQACSMQHLPMPYAFPSLLSGDPQFLLPTPPHLAHHPPHLPTPAQFLPFQTQQPRSPLQ
RIENEVELLGEQLSVGGGFSYAHHHHHHHHHQPPPTLPPSTPLQFLSHHDPLSQELFTVP
YPHFMPRRFTSRRYRSQQAVPPSPYHPSFLPYFLSMLPVPPTIAPTINLELDVDDGEVEN
YEALLNLAERLGEAKPRGLTKADIEQLPSYRFNSNNHQSEQTMCVVCMCDFESRQLLRVL
PCNHEFHAKCVDKWLKANRTCPICRADASEVQRDSE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacgactcttgagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcggagcgaacagagtacgggggcgcggaggggggcagaggactcgggggctac
agctacagccacagcggcgctaggggctttgtacagcccggatccaccaacggctctccg
ccgcagtccccagccgcgtcctcctcttttctcttccacccgcttcacccccaccaaatg
gccatggagcccccaaggactcgatcgcgttctcgttccggatattaccagcagtacggc
ggtgggaacggcaatggaataaccggcagcggagtcatgggatctaaccatcaccaccac
caccaccagcagcagcagcagcagcaactacatccacagcagcacggtgccggttgcgca
ccacttggagctcacagcaaccacccggagaaccagccaagagccccaggaagtaacgcc
tctcccggcattcagaggctttcttcggttcccggagcgcaccgcatcccggcggaagga
gcctctggagggtcctaccactgccatccagatcatgcatatggagacgagagtgataag
agcgaggaaagccccagtccaaagcgccagaggctgtccagtcagtctgtcctggaacag
ctaacctcagccgttcccccaccaaccaccccatctccccctatccgcccctgggagtca
ggacccccaagtcggagacagcctcacccccacgcgcactaccaccaagagagatgcctc
acccccgctcggctcagacgcagcccgccagctaggcgtcagcgcggccgtctctccaga
cccccccgtcacctgcctccccaccaccactccacccaaggccccgcccctcgcctgtcg
ccatccgagcaccaggatgagaactaccaccaccacccccccacacaccagacgtacacg
acacacacgcctagcgtctacagtcagcctcccacagccggggggggggccgtgggcctg
gaggagccccgagctttccaccctcccaccctaccacgactactgcaccctgctgcccac
catcatcacccttaccaccaccatcagcagcagcagcagcatcatcagcagcagcatcat
cagcagcagcatcatcagcagcaccatcacgcagcccagcagcagcaaggagccatggtc
atggacctccatgaacagctgcagcaggccagtctcccggtctcctacacggtgaacccc
gtccccccgcacagtctggcagcgcccctgtgtagcggccagcacctgccccctacctgc
tcctctcaacaagtccccgcctgcagcgtggtcttcagcactggacaacactaccacccg
atgctacaggcgtgttcaatgcaacatttgccgatgccctatgccttcccctcgctgctg
tccggtgacccccagttcctgcttcccacccccccccacctcgctcaccacccgccccac
ctccccacacccgcacagttcctgcctttccagacgcagcagccacgatcgcccttacag
aggattgaaaacgaggttgagcttctgggagagcagctttcagtgggcgggggcttcagc
tacgcacaccatcaccaccaccaccatcaccaccagccccctcccaccctgcccccctcc
acaccgctccagttcctctcgcaccacgaccccctgtcgcaggagctcttcacagtgccc
tatccacattttatgcctcgtcgattcaccagccggcgttaccgctcccagcaggcggtg
cccccgtccccctaccaccccagcttcctgccatacttcctgtccatgctccctgtgccc
cccactatagcccccactatcaatctggagctggacgtagacgacggagaggtggagaac
tatgaggccctgctgaacctggcggagcgtctcggggaggcaaagccccgcggtctgacc
aaagcagatattgaacagcttccatcgtaccgcttcaactccaacaaccatcagtctgag
caaacaatgtgtgtggtgtgcatgtgtgactttgagtctcgccagctcctcagggtcctg
ccctgcaatcacgagttccacgccaagtgtgtagacaagtggcttaaggctaaccgaaca
tgtcctatctgtcgagccgatgcctctgaggtccagagggattctgagtga
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