Trematomus bernacchii (emerald rockcod): 117482540
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Entry
117482540 CDS
T09643
Name
(RefSeq) oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117482540
04812 Cytoskeleton proteins [BR:
tben04812
]
117482540
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117482540
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117482540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
117482540
NCBI-ProteinID:
XP_033986552
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MSATPVEEPPAQEPPSQEPFSQETSAQERSSGSGQTLPFRALQPISDPSASKRVCFYKSG
DYKFSGHRMVINARTFKSFDALLDALSKKVPLPFGVRTITTPRGTTVVKTLDDLHDGGSY
VCSDQRRVKPINLEEVNRRQVPWNTTRPPSAGRKRRQGSRLGPLRRRNDVVTNIVPKRVT
VRTPKRLVVIKNKDPNVKRTIVLQRKTAPTFDALLDYLSQSLLFPVLKLFSTDGRRIDGL
AGLILCSGVVVAAGSEPFRLGNYSSQGAGQMAQIMYMDPVEPSVLQPGTDNNKSFSSGRG
SRNFSLSSERYIVNQINKSINGSTNGPLNQHNRSFETEVEHHPTSKDKCGAGMADNDSHT
RIVPHDDDIEKSFRVNQDGSMTVEMKVRLTIKEQEMLHWTTTLSRSSLRNGTVSASVSEP
GNSSPDSNNTVAKESSSVSEDESKEKNHTSKIGKGVGFNAEQACEGYNSTAFRKTGVKRT
LTPGPLRVTKRASLESVKTVTESGVQENTMGHYSYIERTADGETTEEYCVLKHSSSSSNR
LIPRPRQTKSSEASSKGSPSSISSSGVAEVLQIQSNGMEVTETVMHIYESQPCYDNYFAN
DEYSTDGGPLHGSPPEAESKPSSSNDCDIDFSGQPHTSNSLQRQKEEMLSLSSEPITSRS
EITATNSQIQERAKKGSTPKRETKKKTSKTAQNPKSSTSTSGSDKKQKESIVSPPKDSKH
SSTDKQSSNTSVVRNTLSSSESAKSGQKSKGTEKPQIKKVGKGETKPGKEQASLFDNENV
RKTPSKRQNTSKTAAKFNGHNVDTPTVRPQMKKNISDIFQPKKALVPVRKTISKAKSMNE
KNFPSSKKSLVVNESFSVPTVSPSPTEIHQYVENWLEKVSPDPVPYTEEELTEPRTKVVF
QIGDDSDSDEKNECQANPDGSPSDDIEKSVSCLSVPYLNEATAQRHNEKPLRGLCASMPS
VRVDLVSNENRLRPNKSAAILGTVDNESHSSTPEGLDTKANIVPLLRELYSSIHCLKSAS
ETNVTSNLERSSSLPDFSKQVAGVFGSSCKAFVSFLSVMTLRDNQKTSAPRDGNQSSTSE
ALLMLESLQRISATEDEGGLRASLTDLHSRTSSTFRERWKDFQIMRERLESEPISVKASE
TEFALDLSSEGGDAFEDIEELMDELNMPQDLRAEISSTIHQTKRFYPVEESTFVETERKQ
SDSEEDVEQFVQECNEVTQESPEPDTNSIAEDSSQRKQGHDVAKIGTLQSLFYSEHAKVR
TKSEKEPDQDSEISQTDEHFTDEGKEEEEEVEVERELTNDSEDTEKGERDEAEVGAVTVV
GDEEEKESEVRKGCSEEEEEVEEGTENHMTVDEEEEEETLEDIQETREDDTVEETDEREG
EGETEEEGEEEEGVDEEERGEEWITEERQGEEIEEEADGVIEESDKGEEAEHRFEEMEEE
EEEEEATDSVTVEDVEEGVIQEGGEEEEEEEEEEEEEATDSVTVEDVEEGVIQEEGEEEE
EEEEATDSVTVEDVEEGEEDHIEVVSEENNEEEDEGGKDRSQQTVEDGEEETCDEGEESM
NELKETSLEEESEEEKDVVEEIEEHIRTEQMLDEEEREDDEEDDSNAVHEGVEVLEENAT
DEADIIAVDRDCKNLLEEASYLLSQSSCDEAHADSKVTEANTESSTKHSSEGRCEDDKGN
GTDTVHELETDEGGEPQEHPVEISQELLDFVNNALKCSSLKFTYDTLGKIRIEPDNARVT
QTKTVVPIYNKDPSYGLKRLPSPTTSDLSDYRPESSESGGYKTQDSVDIVTESGEEVSPG
CTPEGRTHVKGANSDLSVHSNIEVSPNSQIKSVGSSSSDISGSKISKEDLSYFSAGSSQK
VDADNAAECMSSTPQKDSPEGVLIDQGRWLLKENHLIRKSPPVLLGMYGELDSTSIDTGD
ENNCADVPSQQDLLAAISSSELEEMAKPLTPKCTYYNMPHGSDSDPFLEDFSEQSRGKDA
SSDKGRGFRVSPTIDTSRTWTRKNGSLSSFASVEFKYPDRKVHPEGESSAGTMARPTSSG
GGNVLQAQDSLDRLRMRCGEYCPIL
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacacctgttgaggagcctcctgcccaggagccaccttcccaggagcccttt
tcccaggagacatctgcccaggaaagatcctctggcagtgggcagacgttaccctttaga
gccctgcagccaatctctgacccctcagcttctaaaagagtatgtttctacaaaagcggt
gactataagttcagtgggcatcgcatggtcatcaatgcccgcaccttcaagtcatttgat
gccctcctggacgctctgtcaaaaaaagtgcctctgccatttggagtgaggaccatcacc
acacctcgtgggaccactgtggttaagactttagatgacttacatgacgggggatcgtat
gtgtgttctgaccagagacgggtgaagccgataaacctggaagaagtgaaccggcggcag
gtaccatggaataccaccagaccccccagcgcagggcgaaaaaggcgacaaggatccagg
cttggtccgttaagaagaagaaatgatgttgtcaccaacattgtcccaaagagggtgacc
gtaaggacaccaaagaggcttgtggtcatcaaaaataaggaccccaatgttaaacgcaca
atcgtgttgcagagaaaaacagcaccaacattcgatgctttactcgactacctctcccag
agcctgctgttcccagtgctgaaactcttctctacggatggcagaagaattgatggtctt
gcaggacttattctgtgctctggagttgttgtagcagcaggcagtgagcctttcagatta
ggaaactacagttctcaaggagctggccagatggctcaaataatgtacatggatcctgtg
gaaccctctgtgttgcagcccggaactgacaacaacaaatctttctcgagtggaagaggc
tcaaggaatttttccctatcatcagagagatatattgtcaaccagataaacaagtccata
aatggaagcacaaacggtcccttgaatcagcacaaccgatcatttgaaacagaggtcgaa
catcatcccacatccaaggacaaatgtggagctgggatggctgataatgactctcatact
cgcattgtacctcatgatgatgacattgaaaagtctttccgtgtcaatcaagacggcagc
atgacagtggagatgaaagttcgactgacaattaaagaacaggagatgctccactggact
acaacgctcagccgctcaagccttaggaatgggacagttagtgcctcggtatctgagccg
ggcaacagctcacctgactcaaacaacaccgttgccaaagagtcctctagcgtcagtgaa
gatgaatcaaaagagaagaaccatacttctaagattggaaagggagttggctttaatgct
gagcaagcatgtgaaggctacaattctacggcttttagaaaaactggtgtcaaacgaact
cttacaccaggtcctctgcgcgttacgaagagagcgtctcttgagagtgtaaagacggtg
acagaatcgggagttcaggaaaacaccatgggacattattcctacatagagaggacagct
gatggtgagacgactgaggaatactgcgttttaaaacacagcagcagcagcagcaacagg
ctaattccaagacctaggcaaacaaagtcttcagaagcaagcagcaaaggctcgccctcc
tccatcagttcgtcaggagtagccgaggtgcttcagatacagagtaacgggatggaggtc
acagagactgtgatgcatatttatgagagtcaaccctgctacgacaactattttgcaaat
gacgaatatagcacagacggcgggcctttgcatggctctcctccagaggcagaaagcaaa
ccgtcatccagcaatgattgtgatattgattttagcgggcagccacacacctctaactca
ctacaaagacagaaagaggagatgttatcattgtcttcagagccaataacttcaagaagt
gagattactgcaacaaactcccaaatacaggaaagagcaaaaaaaggcagtactcctaaa
agagagacaaagaaaaagacaagtaaaactgctcagaatccgaagagttccacttcaaca
agtggttcggacaaaaagcaaaaagaaagcatagttagccccccaaaagatagcaaacat
tcatctacagacaagcagagcagcaatacaagtgtggtcagaaatactctgagttcatct
gaaagtgctaaaagtggacaaaagagtaaaggaacagaaaagcctcaaattaagaaagtg
ggtaagggtgaaacaaagcctgggaaagagcaagcttcattatttgacaatgaaaatgtg
agaaagaccccgtctaagagacaaaacacaagtaaaacagctgctaaatttaatggccat
aatgtagatactccaactgtgaggcctcaaatgaagaagaacatctcagacatttttcaa
ccaaagaaagcactggtgccagtccgaaagacaataagcaaggcaaaatccatgaatgaa
aaaaactttccatcatctaaaaagtctttagtggtaaatgagagtttttcagtacctact
gtcagtccttcacccactgaaatccaccaatatgttgagaactggttagagaaagtcagc
ccagaccctgtgccatacactgaggaggaactcacagagcctcggacaaaggtcgtgttt
cagatcggcgatgattctgattccgatgaaaagaatgaatgccaggcaaatccagatggg
tcgccaagtgatgacatcgagaaatcagtttcttgtctatcagtaccatatttgaatgaa
gctacagctcagcggcacaatgaaaaacctctaagagggctgtgtgcttcaatgcccagt
gttagagtggatcttgtgtccaacgagaacagattgagaccaaacaaatctgcagcaatc
ctcggaacagttgacaatgaatcacattcatcgacacccgagggtttggacacaaaggca
aacatagtacctctcctgcgggaactttactcttcgattcactgcctcaaaagtgcatct
gaaaccaacgtaacatccaacctagaaaggtccagcagtcttcctgatttctcaaaacaa
gtggctggagtgtttggctcgtcatgtaaagcctttgtatcattcttatcagtgatgact
ctacgagacaaccaaaaaacatcagcgccgagagatggcaaccaatcgagcacctcggag
gccttgctgatgttggagtcactgcaaagaatttccgctaccgaggacgagggagggctg
agggcaagtttgacggatctgcacagcagaacatcttctaccttcagagaacgctggaag
gatttccagattatgagagaaagactagaaagtgaaccaatatctgtcaaagcttcagag
acagaatttgcgctggatctttcttctgaaggaggggatgcgttcgaagatattgaagag
ctaatggatgagttgaatatgccacaagacctcagagcagagatttcttcaacaatccac
caaactaaacgtttttaccctgtagaggagagcacctttgtagaaactgaaagaaaacag
tcagactctgaggaggatgttgaacaatttgttcaagaatgcaacgaagtaacacaagaa
tcaccagagcctgatactaactccatagctgaggacagttctcagagaaaacagggtcat
gatgttgcaaagataggtaccttgcaatcactgttttattctgaacatgccaaggtgaga
accaagtcagagaaagaacctgatcaagattcagaaatatcacagacagatgagcacttc
acagatgaaggaaaggaggaagaggaagaagtagaggtggagagggagctcacgaatgac
agtgaagacactgaaaagggagaaagggacgaggcagaagtgggggcagtgacagtagtg
ggtgatgaagaggagaaagaatcagaagtgagaaaagggtgttcagaggaagaggaggaa
gttgaggaagggacagagaaccatatgacagtggacgaggaggaagaggaggagacatta
gaagacattcaagaaacaagagaggatgatactgttgaggaaacagatgagagagagggt
gaaggggagacagaggaagagggggaggaggaggagggggttgatgaggaagagaggggg
gaggaatggataactgaagagaggcaaggggaagagattgaagaagaggcagatggggtt
attgaggagtcggataaaggagaggaagcagaacatagatttgaagagatggaggaagag
gaggaagaagaagaagcaacagactcagttactgtggaagatgtagaggagggggttata
caggaggggggggaggaggaggaagaggaggaagaggaggaagaagaagaagcaacagac
tcagttactgtagaagatgtagaggagggggttatacaggaggagggggaggaagaggag
gaagaggaagaagcaacagactcagttactgtggaagatgtagaggagggggaagaagac
cacatcgaagtggtaagcgaggaaaacaatgaggaggaagatgagggggggaaagataga
tctcaacagacggtggaggatggtgaggaagaaacatgtgacgagggtgaggagagcatg
aacgagttaaaagaaactagtctcgaggaagaatccgaggaagagaaagacgttgtggag
gagattgaagaacatataagaacagagcaaatgctcgatgaagaggagagggaagatgat
gaagaagatgatagtaatgcggtacatgagggggttgaggtgctggaggaaaatgctact
gatgaagcagacattattgctgtggacagagattgtaaaaacctgctagaggaggcctcg
tatttgctgtcgcagagcagctgtgatgaagcacatgcagattcaaaggtaacagaagct
aacactgaatcatcaaccaaacattcctctgagggccggtgtgaggatgataaaggtaat
gggacagacactgttcatgaacttgaaaccgacgagggaggggagcctcaggaacaccca
gtggagatatcacaggaattgcttgactttgttaacaacgccctgaagtgctcttcactt
aaattcacgtacgacactctggggaaaatcaggatcgagccagataatgctagagtaaca
caaactaaaactgttgtcccaatatataacaaggatccttcatatggcttaaagcgtctg
ccatcccccaccacctcagatttgtccgattacaggccagaatcgtcggagagtggtgga
tataaaactcaagattcggtagatattgtcacagagagcggagaagaggtttctccaggc
tgcacccctgaggggagaacacatgtcaagggagccaactccgacctttctgttcacagt
aatatagaagtttcgccgaattctcaaataaaaagtgtgggaagttcatcctctgatatc
tcaggcagtaaaatctcaaaggaggacctgtcgtatttcagtgctggaagctcacaaaag
gtcgacgctgataatgccgcagagtgcatgtcttcaacgccgcagaaggactcacctgaa
ggggttttgatcgaccaaggtagatggctgctcaaagagaatcacctcatccgaaaatct
cctccagtcttgctgggaatgtacggtgagttagatagcacgtctatcgacacaggtgac
gaaaacaattgcgcggatgtcccgtcccagcaagaccttcttgcagccatttcctcatca
gagctcgaggagatggcgaagcctctaactccaaagtgcacctactacaacatgccacat
ggaagcgattctgacccctttttggaggatttcagtgaacaaagtagggggaaagatgca
agcagtgacaaagggagaggcttcagggtatcacctacaattgacacttccagaacctgg
accagaaaaaatggtagtctttcttcatttgcatcagttgagtttaaatatccagacaga
aaagtccatcctgagggagagtcctcggctgggacaatggcaagaccgacctctagtgga
ggagggaatgtattgcaggcacaggactcccttgacagactacgaatgagatgtggcgaa
tactgtcccatactatag
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integrated database retrieval system
