Trematomus bernacchii (emerald rockcod): 117482690 Help Entry 117482690         CDS       T09643                                  Symbol focad Name (RefSeq) LOW QUALITY PROTEIN: focadhesin   KO K27498   focadhesin Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tben03019]     117482690 (focad) Messenger RNA biogenesis [BR:tben03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      117482690 (focad) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Focadhesin DUF3730 Motif Other DBs NCBI-GeneID:  117482690 NCBI-ProteinID:  XP_033986790 LinkDB All DBs Position Unknown AA seq 1807 aa AA seqDB search MNGARPAGMMEGLKIRFDFPSPVIQAQTVRTLVAAVLKEKGSNGPITQSSPQGPALEALW QQCCSDGSLVRSSCCDAVVLLVEQQHAELQHVLHSVLNLLPSARNVQGLMKVIGRLLQMQ ADQRDAEKHFSCPYSIRNNPHPYITALENRVDCWPALLLEIDDFIQQAAERNEPAYVTML APFLRYLYCEPQRQPQHALLRHGLLRVLMPSHPAAGSLLQNKEQDPVFESLLHCLCQLVP HMQVDSVEAVLEFCGFVDALLQVLVPAPEQWRSERVGLTLQLLCACRRCLRLNADCRPLL NLLQQLLPACQQELPLDELLMGVALLLLEVPATQQTSLLNLALSLVPEHGELAPWLSPVL VLPVLQLLACSGLTEALADQRRHRLNQDLAHSLLRRISRETDKLPQSSPPLALPLSSWYN ELSVALSVLRRVTEGPAAAADWLLSVSSALSSGQSQLCSLSLMVTHLLLTGGEDVCQLAL KAIQALAAAEPCQVPSLLPVLLYKLGKEKNPVLAHAVLNCLPHLGTHKLCVPMVLQTLNK LASAPKLRAVAMRLLTALWKKQDRVYPDLQRLLGQQDGRGGVGRDVQWEQILSRAACLRD ICRERPYQHGGDMLAAITLTLQQCTRPDMATPAALALQGLQELCRAEVVDIVSLWRTLGP QLSSDPRAQMVRVVSELLAMVPQLSVKSEEYQKLKEEVVSFLWNNAVSKDPEVASCGYRA LADFPEVAHTVNLLPEAARPATKAPDNEEDEEEKEEEEKDLSVPGPSYVKLMALTPGSVL PAFEIFLTSLVKQEMSQMPRGVYFSALRGGNLRSDQGKTMAGVPSFMLKTYEKNKQPGLK PGLAAGLLLSYELPVQTDREGRAMDRFLVSRSRSYQLTLAALIHEVNIQPSEWHRALLLP QAWRGFMSRAFHAALQGRHADLGMQQKQGKEDPQEIQYKQHCAWLWARDQLTDVIKTATK DSPVVQGNSILALSGLASVLAKYESNLPADSEGSLRAGPEFVPTASWLAMVLNTLLSISS YRPSGQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQREGLLQVLSALQAGL PGSSSAEDSQALQFHSGLALGMVLSSLHQQRLSDVSVQKDTDVLRSALDALEGSAFNPDL EYNTGCVLGMGLVLASICSSRQTEQQVHVSQTLDRLLSTLQDSSGQGRMLQEVLAYSVAC VCVSAFSADIIDAAKAEEVMTSLRTLTEESQQTPGFXLALGLVVHGLSMSGHGKAEDIQP RLLAAWVKILLAEGCPTMQRLAAVNGLVALVGSESYLFQQTGELELSSPQQKPLNRXSEP SQQIITFSGAIGMQSNSACLLGHLQLAHMSTSHRTQPFPQDFSYLSEKSLSEPSLXLITE AGRKGPEFSPPSLVKTALTPLASVGSSFQYPPINWSAVLSPLMRLSFGEDVQHQCLCLAS CQAQTSQSASLFLGSWLAPPLVHSLSLLTRAHLYEGLGLWMKHVAEDKLQVHTESLGLQQ FQDDLRPQRLALCRSLLQGLAQAMALPNPPNSCWTLLCSTTEKIFTLLPNHIQDHEVDLY VGIAKCLSEMSDAEIDRITKVTEAQMEKTCFVLAYLTSQGRVPLLGLNDVIAGVLQGWPQ HRVGWLLLQTFYQCRLATNPNTGVSKRMEWLLELMGHIRNVAYGATPVTCGDTKQATDFL FQVFAAAVVSWGDHSMPLLFGIRAQWFPWQPDSKPQTLPHGLYGEESSTDHALPQCLLGM PHSLALLLNKEPWNIQTHKLDWLFSITEGPEQSLSATTINTAKAALLALKSSAEFKKKVV WTRAYGW NT seq 5424 nt NT seq  +upstreamnt  +downstreamnt atgaatggggcgcgacccgcaggtatgatggagggtctgaagatacgctttgatttcccc agccctgtcatacaagcccagacggtgagaactcttgttgctgctgtgctgaaggagaaa ggttccaatgggccgatcacacagtcctctcctcagggtccggctctggaggctctgtgg cagcagtgctgcagtgacggctctctggtgcgctcctcctgctgcgacgccgtggtcctg ttggtggagcagcagcatgcagagctgcagcacgtcctccacagcgtgctcaacctgctg ccctccgccagaaatgtccaggggctgatgaaggtgattggcaggctgctgcagatgcag gcagaccagagagacgcagaaaaacacttcagctgtccttactccatcaggaacaaccct cacccatacatcactgctctggagaaccgagtggactgctggcccgctctgctgctggaa attgatgacttcatccagcaggctgctgagaggaatgaacccgcctacgtcaccatgctg gcccccttcctgcgctacctgtactgtgagcctcagaggcagccgcagcacgccctgctg cgccacgggctcctcagggtgctgatgccctctcacccagcagccggatcactcctccag aacaaggagcaggacccggtgtttgagagcctgctgcactgcctctgtcagctggtgcca cacatgcaggtggacagtgtggaggcggtgctggagttctgtgggttcgtagacgccctg ctgcaggttctggtcccggcccctgagcagtggaggtcagagagggtggggctgaccctc cagctgctgtgtgcctgcaggcgctgcctccggctgaatgcagactgcagacctcttctc aacctattacagcagctcctgccggcctgccaacaggagctaccattggacgagctgttg atgggcgtggcgcttctcctgctagaagtgccagcaacccagcagaccagcctgcttaat ctggctctgagtctggtccctgagcatggggagctggccccctggctgagtccggtcctg gttcttccggtgctgcagctgctggcctgctcgggcctcaccgaggcgctggctgaccag cggaggcacagactcaaccaggacttggcccacagcctcctccgcagaatcagcagggag acggataaactcccacagtccagcccaccactggctcttcctctcagttcctggtacaac gagctcagcgtggctctgtccgtactgcgtagagtgacggagggcccggcggcggcagct gattggctgctgtccgtcagctcggccctgtcctccggccagagccagctctgctccctc agcctcatggtgacccacctcctcctcacggggggggaagacgtctgccagctggctctg aaggccatccaggccctcgctgctgcagagccctgccaggtcccgtctctgcttcctgtt ctgttgtacaaactggggaaggaaaagaatcccgtcctggctcatgctgtgctcaactgt ctgccacacctcgggactcataagctctgtgtccccatggtgctgcagaccctcaacaag ctggccagcgcccccaagctgagagccgtggcaatgcgcctcctgaccgctctgtggaag aaacaggatcgtgtctaccctgatctgcagcgtctgctgggccagcaggacggcaggggg ggggtggggagggacgtccagtgggagcagatcctgtccagagcggcctgcctcagagac atctgcagagagaggccttaccagcatggaggggacatgctggctgccatcacgctgact ctgcagcagtgcaccagaccagacatggcaacccccgctgctctcgccctgcaaggacta caggagctgtgccgggcagaggtggtggacatcgtctcgctgtggaggaccctcggcccc cagctgagctcagacccccgtgctcagatggtcagagtggtctctgagctcctggctatg gttccccagctcagcgtcaagtcagaggaataccagaaattgaaggaggaggtggtcagc tttctctggaataatgctgtgagcaaggatccagaggtggccagctgtggctacagagct ttggcagattttcctgaagtggcccacacagtgaatcttcttcctgaagcagccagacca gctacaaaggcccctgacaatgaggaggatgaagaggagaaggaggaggaagagaaggac ctctctgttcctggtccctcctatgtgaagctgatggctctcacccctgggtctgtcctg ccagcctttgagatcttcctgacctcgctggtgaagcaggagatgagccagatgcctcgg ggggtttacttctctgccctgagggggggcaacctgcggtcagaccaggggaaaacaatg gccggagttccatctttcatgcttaaaacctatgagaagaacaagcagcctgggctgaag cccggcctggcagccgggctgttgctaagctacgagctgccggtgcagacggaccgtgag ggcagagccatggatcgcttcctggtcagccgcagccgcagctaccagctgaccctggca gccctgatccatgaagtgaacatccagccgtctgagtggcaccgggccctcctgctgccc caggcctggaggggcttcatgagccgggccttccacgccgccctgcagggtcgacatgct gatttggggatgcagcagaagcaaggcaaagaagacccccaggagatccagtacaaacag cactgtgcctggctgtgggccagagatcagctgacagacgtcatcaaaactgctacaaag gacagtccggtggttcagggaaactccatcctggctctgagcggcctggcttcagtgctg gctaaatatgagagcaaccttcctgctgacagtgaaggcagcctcagggcggggccagag ttcgtgcccactgcctcctggttggccatggtgctgaacactctgctcagcatcagcagc taccggccctcaggacaggtgttcccatggttcctgcaccgctcctactcgggggagaac acggcgagcgcgatcgcccgctcctgtgccagcctggccctgtccctgctggtcccggtg ctggtggtgtggcagagggaggggctgctccaggtcctgtctgcgctgcaggctgggctg ccgggctccagctccgcagaggactcccaggccctgcagttccactccggcctggcgctg ggcatggtgctgtccagcctgcaccagcagcgcctcagtgacgtctcggtccagaaggac actgatgtcctccgcagcgctctggatgctctggagggcagcgccttcaaccccgacctg gagtacaacacgggctgtgtgctgggcatgggtctggtgctggcctctatctgcagcagt agacagacggagcaacaagtccacgtgtcccagaccctggacagactgctgtccaccctg caggacagcagcgggcaggggcgcatgctgcaggaggtgttggcgtactctgtggcgtgt gtgtgtgtgtcggccttcagcgcagacatcatagacgctgccaaggctgaggaggtcatg acctctctgcgcaccctgaccgaggagagccagcagaccccaggcttcntcctggctctg gggctggtggtgcacggcctgtccatgtccggccacgggaaggccgaggacatccagccc cgcctgctggctgcctgggtgaagatcctcctggcagagggctgtcccacaatgcagcgg ctggctgccgtcaacggcctggtggcgctggtggggtctgagagctacctcttccagcaa accggtgagctggagctgtcctctccgcagcagaagccgctgaacaggtgatccgagccg tcacaacagatcatcaccttctctggagccatcggcatgcagtccaacagcgcctgtctg ctgggacacctgcagctggcccacatgtccaccagtcaccgcacacagccgttccctcag gacttcagttacctctcagagaaaagtctctcagagccatcattgnnactcatcacagag gcaggaagaaaaggtccagagttttcccctccatctctggtgaagacggctctgaccccg ttggcctccgttggatccagtttccagtacccccccatcaactggagcgctgtgctgtcc cctctgatgagactcagcttcggagaggacgtgcagcaccagtgtctgtgcctcgcatcc tgtcaggctcagacttcccagagtgcatctctcttcctgggctcctggctggccccacct cttgtgcacagcctcagtctcctgacccgggcccacctgtatgagggtctgggtctgtgg atgaagcatgtggctgaggacaagctgcaggtccacacagagagtctgggtctgcagcag ttccaggatgacctccgaccccagcgcctggccctgtgccgctccctgctgcagggcctg gctcaggccatggccctccccaacccccccaacagctgctggaccctcctctgctccacc acagagaagatcttcaccctgctgcccaaccacatccaggatcatgaagtggatttgtat gtgggaatcgccaaatgtctgtctgagatgtctgatgcagagatcgaccggatcacgaaa gtaaccgaggctcagatggagaagacctgcttcgtgctggcctacctgacctcccagggc agagtccccctgctggggctcaatgacgtcatcgcgggggtgctccagggctggccccag cacagagtcggctggctccttctgcagaccttctaccagtgtcgcctagcaaccaaccct aacacaggcgtttccaaacgaatggagtggcttctggagctgatgggacacatccgaaat gttgcctacggtgcaacccccgtcacatgtggagacacgaaacaggccacagacttcctg ttccaggtgtttgctgcagctgtggtttcctggggagaccactccatgcccctcctcttt ggcattagggcccagtggttcccgtggcaacctgactccaagccccaaaccctaccacac ggtctgtacggtgaggagtcctccactgaccacgccctgccgcagtgcctactgggaatg ccccacagcctggctctgcttctgaacaaagagccctggaacatccagacacacaagtta gactggcttttcagcatcacagaaggtcctgaacagagtctgtcggccacaaccatcaac acagccaaagccgccctgctggccctcaagtcctctgccgagtttaagaagaaagtcgtg tggaccagagcgtacgggtggtag

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