Trematomus bernacchii (emerald rockcod): 117482693
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Entry
117482693 CDS
T09643
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117482693 (tmc5)
03037 Cilium and associated proteins [BR:
tben03037
]
117482693 (tmc5)
Transporters [BR:
tben02000
]
Other transporters
Pores ion channels [TC:
1
]
117482693 (tmc5)
Cilium and associated proteins [BR:
tben03037
]
Other cilia and associated proteins
Stereociliary proteins
117482693 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117482693
NCBI-ProteinID:
XP_033986795
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MTSYSNGGFFNPAYHDSETLEIDRRSSSKTPLHTNPYARGEGADGNYSTGQISSDDALRR
VPRGGWQEESWRGRESLPMGHISTRPRSPSWQHDINHSTFQIPPDSQYDRSLSIRLPSTT
SGNMTMRRRGISMRRMSMFPNGDPNHVAFTEDAIRNEMENEEQNLVKELVALSTRDRIWA
IRDLPMSFDEKKQIRSQVLAFKSAKKSRQFTCFADCSENMSLSFRRCGYGIRSARQTLEL
WQGIMKEIGGTFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPQLVYSPWPNISPNVSF
RGLEILTGAGYFNNTVMYYGGYSNETKVHLAEYNMQLAYFFTIAVYMVLCGIALIFSMAS
SFKTNYVLADPASNSAWQLLCSWDFNITNEKAVRQRKNNLRVQLKESMSEKAQREGLTLS
ESLKHFGVYLGAWLLSTSLAVGSGASIYYVCQFEQQRATDSANWSLLQEAETLLVPFVVS
LMNLVVPLFYSLFNKFEHYSSQRKQIYALVVRNVLLKMSILAVLCYNWMNVVAVKFSCWE
SMVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLELIYAQTL
AWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRSGRAAQMQTIFIALLFFPFFV
GAVSMVAFTAWSLTPSEHCGPFRGLNSTFNVVEVWMVHLEETSSSEWVVWIYQNVIRSEI
FYFLISLIIIVIIYIFWQVTRGRKLLIRVLRQQIVNEGKDKSFLLERLQNLQKSHPDKRS
KQKNPKKHSKRRPDDHSSGGQSTSNAMVQALLARQQLEKEEEERLSTGGVPVPSDISSSS
SALIQAMQARQRAEGQERDEHYSAVYYESPTNTSSAVTQAMQARQRAQVEGTDDASDPTS
SVSSVMMQVMQARQRAEEEDRPQWVPAPPQNPAPAGSSALIQAMLARQQAQNEYDDGY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagtaatggaggattcttcaaccctgcctaccatgacagcgagactctg
gaaattgatagaaggtcttccagcaaaacccccctccacactaacccctacgcccggggt
gagggtgcagatggaaattactccactggtcagatcagcagtgatgatgctttaaggagg
gtgccgcgggggggttggcaggaggagagctggagggggagggaaagcctccccatgggc
cacatctcaacacgccctaggagtccttcatggcagcatgacatcaatcacagtaccttc
caaatcccacctgactctcagtatgatcgatcactttccatccgccttccttccacaaca
tcaggtaacatgacgatgagaaggaggggaatatcaatgagacggatgagcatgtttcct
aacggtgatcctaaccacgtagccttcacagaggacgccataaggaacgagatggagaat
gaggaacagaacctggtaaaagagcttgttgccctatcaacacgagacagaatttgggcg
attcgggaccttccaatgagctttgatgagaagaaacaaataaggagccaagtgctggca
ttcaagtctgccaagaaatctcgccagttcacatgttttgcagactgctctgagaacatg
tcactgtctttccgcaggtgcggatatggtataagatcggccaggcagaccctggagctg
tggcagggcatcatgaaagagatcggtggcacgtttggcaccagcgtgctctcctacttc
gtgttcctcaagtggctgctcatgttcaacattttctccttcctggtgaactttggcttt
attaccatcccgcagcttgtttacagcccctggcccaacatatctccgaatgtgagcttc
agaggactggagatactgactggagcaggttacttcaacaacaccgtcatgtactacggg
ggctacagcaatgaaaccaaggtgcatctagcggagtacaacatgcagttggcttatttc
ttcaccattgcagtctacatggttctgtgtggaattgcacttatcttcagcatggccagc
tcattcaagacaaactatgtgctagcagaccctgcttcaaacagtgcatggcagcttctg
tgcagctgggactttaatattaccaacgagaaggcagtgagacagcgcaaaaacaatcta
cgagtgcaactcaaggagtccatgtcagagaaggcccagagggagggcctaaccctctct
gaaagtctgaagcactttggggtttatctgggtgcctggctgctctccactagcctggct
gtcggctctggagctagcatctattatgtctgccaattcgaacagcagcgggcaacagat
tctgccaactggtctctgctgcaggaggcagagactctgctggttccctttgtggtgtct
ctgatgaacctggtcgtcccgctcttctactccctcttcaacaagtttgagcactactcc
agccagcgcaaacagatctacgcactggtagtcagaaatgtgttactcaagatgtccatt
ctggctgtcttgtgttataactggatgaatgtggtggctgtaaagttttcgtgttgggag
tccatggtaggacaggctttgtaccgactggtcattgttgattttctttttctaatgttg
ggatccttctttggagagtttcttagcaatgtgattgggaccagattacttccacgtctg
ggagttccagagtttgatgtagccagaaatgtccttgaactgatctacgcacagactctg
gcctggattggtatttacttttctcctctgctgcctgccatccagatcctcaaatttttc
attttgttttacttaaagaaggtcagcctgacccagaactgccagcctccgaggcggtca
ggcagagccgctcagatgcaaaccatcttcatcgccctgctcttcttccctttcttcgtg
ggagccgtctctatggttgcgttcaccgcctggagtctgaccccctcagagcattgtggt
cctttccggggactcaacagcaccttcaatgtggtcgaagtttggatggttcatctggag
gagacctctagttctgaatgggtggtttggatctaccaaaatgtcatcaggagtgaaatc
ttctactttcttatctcactcatcatcatagtcatcatatacatcttctggcaagtcact
cggggccgcaagctccttattcgtgtactgagacaacagattgttaatgaagggaaagac
aagtccttcttgttagagagactccaaaatctccaaaaatctcaccctgataaaagatca
aaacagaagaatccgaaaaagcactccaaacggaggccagatgaccactcctcaggcggt
cagtccacctcaaacgccatggttcaggcgttactcgctcgccagcagctcgagaaggag
gaagaggaaagactcagcactggcggagttccagttccctccgacatctcctcctcctcc
agtgctcttattcaggccatgcaggcccggcagagggccgagggtcaagaaagggacgaa
cactacagcgcagtttattacgaaagccccacaaacacatccagcgctgtcacacaggcg
atgcaagccagacaaagagcgcaagtggaaggaactgatgatgcaagtgatccaacttct
tctgtgtcaagtgttatgatgcaagtcatgcaagccaggcagagggcagaggaagaggat
aggcctcagtgggtcccggcacccccacaaaacccagcacccgcaggctccagcgcgctc
attcaggccatgttggcccggcagcaggcccagaacgagtatgatgatggctactaa
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