Trematomus bernacchii (emerald rockcod): 117482709
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Entry
117482709 CDS
T09643
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117482709 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117482709 (taf6l)
03036 Chromosome and associated proteins [BR:
tben03036
]
117482709 (taf6l)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117482709 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
117482709 (taf6l)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117482709 (taf6l)
STAGA complex
117482709 (taf6l)
TFTC complex
117482709 (taf6l)
SAGA complex
117482709 (taf6l)
SLIK complex
117482709 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
117482709
NCBI-ProteinID:
XP_033986812
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MADREERRFAEVSRDSVKLMAESSGVELGDDVATLLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAICGYGAQDALPFRSAKEGELFFIEDRDINLVELALATNIPK
GCAETLVRVNVSYLDGKGNLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPNLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPAEGGSGGPQVSVGGAMGYRVSSPGLSPPPEPLSDAALGIA
SHLQAGGAGCPWEEWTPVPLPAMYSELYSFFGDSLAVRFSTGPGWGSPPCTLSQHSDTKK
EPAGPASNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAATGPGRSLARSSSSSSSS
SVQRSRSSSSRPGQRSAGLSRDVFPKARFTPPPTGLPVFTFLIGGRQMGRRCQGRRPFQT
NFAPPPPLPAVPPRAYAHKLPVIGRVGKPVRRGAGSHYSLHLPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgacgcttcgcggaggtttcccgggactccgtcaaactcatg
gccgagagttcaggcgtggagctcggcgacgatgtggccacactgctggcggaggatgtg
tgttaccggctgagggaggcgactcagagcagctctcagtttatgagacatgccaagagg
aggaagctgacggtggaggacttcaacagagctctgcgctggagcaacgtggaggctata
tgtggctacggcgcccaggatgctcttcctttccgctcagctaaagaaggagagcttttc
ttcatcgaggaccgggacatcaacctggtggagctggctctggccaccaacattcccaaa
ggctgtgcggagaccctggtgcgagtaaatgtgtcttacctggatgggaaaggaaacctg
gagcctcaggggacagttccctcagcggtgcagactctatcagaggacctgttgaagtac
taccagcagatcacacgggccatcctgggggaggacccccacctcatgaaggtggctctg
ctggacctccagtccaactccaagatcgccgccctcctgccatactttgtttacgtcatc
agtggggtgaagtcggtgagccacgacctggagcagctgaaccggctcctccacatggtg
aagagcctggtccagaaccccaacctgtacctgggctcgtacgtgcgcagcctggtgtcc
agcgtcatgtactgcatcctggagcccctcgccgcctccatcaacccgctcaatgaccac
tggaccctccgggactacgccgcgctgctgctcagccacatcttctggactcacggtgac
ctggtgagcggtctgtaccatcagatcctcctgtccctgcagaaggttctgtcggacccg
gtgcggcccctctgctcccactacggggccgtggtggggctccacgctctgggctggaag
gctgtagagagggtgctgttccctcacctccctgcgtactgggccaacctgcaggcggtg
ctggacgattactctgtgtccaacgcacaggtcaaagccgacggacacaaggtgtacgga
gccatcctggtggcggtggagcggctgctgaagatgaaggctctgtctctgagtcagcct
gcagagggggggtccgggggtccgcaggtctccgtggggggtgccatggggtacagggtg
agctcccctggcctcagcccccccccagagcctctgtcagacgccgccctgggcatcgcc
agccacctgcaggcggggggggccggctgcccctgggaggagtggacccccgtccccctg
cccgccatgtactccgagctgtactccttcttcggggacagcctggcggtccggttcagc
acggggcccgggtggggcagccccccctgcaccctgtcccagcacagtgacaccaagaag
gagcctgctggccccgcctccaacccagacaccacccgaaagatgccccagctgacggcc
aacctcaacatcagccccaggcaggacgggagccctcgcaccgacccccccccacccagc
ctggcagccaccggaccaggaaggtccctggctcgctcctcttcctcctcctcttcctcc
tcggtgcagcgctccagatcgtcctcgtcccgccctggccagcgctcagccggtctgtcc
cgagacgttttccccaaagctcgcttcacccccccccccacaggactgccggtgttcacc
ttcctgattggcgggcggcagatgggccggcgctgccagggccgccgccccttccagacc
aacttcgccccgcccccgcctcttcctgccgtcccgccacgtgcctacgcccacaaactg
cccgtcatcggccgggtgggcaaacctgtccgccggggggccggctcccattactccctt
cacctgcctctctag
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