Trematomus bernacchii (emerald rockcod): 117482871
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Entry
117482871 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117482871
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117482871
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117482871
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117482871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF4746
FancD2
Motif
Other DBs
NCBI-GeneID:
117482871
NCBI-ProteinID:
XP_033986990
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All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFDCMDVLSPGQMLDFYTSSPSSCMLQEKALKACISGLHAHREWQHRRSAHSIETQSTSS
EELVPSPPSPPPPPRVYKPCFVCEDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDK
NCIINKVTRNRCQYCRLQKCFGVGMSKESVRNDRNKKKKESPKPEPTENYELTAELETII
EKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRVPG
FTALTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTDL
VFTFAHQLLPIEMDDTETGLLSAICLISGDRQDLEEPSKVDEMQEPLLEALKIYVRKRRP
SKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLENSEGQDGSSGGEK
SSGGGKKGGKKGKKNSGKSSSKGGKKKSETPAKEEEEEEEETPRRNETPNEKTAESPEFP
DTEEAFPPGDKS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgcatggacgtgctgagtcccgggcagatgttggatttctacacctcgagc
ccgtcctcgtgcatgctgcaggaaaaagctctgaaagcctgcatcagcggactgcacgcg
cacagagagtggcagcaccgccggagcgcgcactccattgagacgcagagcaccagttct
gaggagctcgtccccagccccccctcaccaccgccccccccaagagtctacaagccctgc
ttcgtctgtgaggacaagtcctcgggataccactatggagtcagcgcctgtgagggctgc
aaggggtttttccggcgtagcatccagaagaacatggtgtacacgtgtcaccgggacaaa
aactgtatcatcaacaaggtgacgaggaaccgctgtcagtactgccgcctgcagaagtgc
ttcggagtggggatgtccaaagagtctgttcgaaacgaccgcaataagaagaagaaggag
agtccgaagccggagccgacggagaattacgagctgacggccgagctggaaaccatcatc
gagaagatcagaaaggcccatcaggaaaccttcccctccctctgccagctgggaaaatac
accacgaactcgagtgcggaccaccgtgtgcggctggacctcggtctgtgggataaattc
agtgaattggccacaaagtgcattataaagatcgtggagtttgccaaacgagttcctggc
ttcacggcgctcaccatcgccgaccagatcactctcctgaaggccgcctgcctcgacatc
ctgatcctgcgcatctgtacgcgctacaccccggatcaggacaccatgaccttctccgac
ggcctgactctgaaccggactcagatgcacaacgctggcttcggcccgctcacagacctc
gtcttcaccttcgctcaccagctgctgcccatcgagatggacgacacggagacagggcta
ctgagcgccatctgcctcatctccggagaccgccaggacctggaggaaccctctaaagtg
gacgagatgcaggagcctcttcttgaagctctgaagatctacgtgaggaagaggaggccg
agcaaacctcacatgttccccaaaaccctgatgaagatcaccgacctgcggagcatcagc
gctaaaggcgcagagcgggtcatctctctgaagatggagattcccggttcgatgccgccg
ctcatccaggagatgctggagaactcggagggtcaggacgggtcgagcggcggggaaaag
agctccgggggcgggaagaaaggagggaagaagggcaagaaaaacagcgggaagagcagc
agcaagggcggcaagaagaagagcgaaactccggctaaagaggaagaggaggaggaggaa
gaaacccctcggagaaacgaaactcccaacgaaaaaaccgcggaatcgccggagtttccg
gacaccgaagaggcttttccgcccggagacaagtcctaa
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