Trematomus bernacchii (emerald rockcod): 117482903
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Entry
117482903 CDS
T09643
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117482903 (thrb)
04081 Hormone signaling
117482903 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117482903 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117482903 (thrb)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117482903 (thrb)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117482903 (thrb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
Motif
Other DBs
NCBI-GeneID:
117482903
NCBI-ProteinID:
XP_033987028
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MSEPAENCSPGWKDEAIQNEPAENCSPGWKDEAIQNGYIPSYLDKDELCVVCGDKATGYH
YRCITCEGCKGFFRRTIQKNLNPTYACKYEGNCVIDKVTRNQCQECRFKKCIAVGMATDL
VLNDSKRLAKRKLIEENRQRRRKEELQKTVWDRQEPTQEEWDLIRMVTDAHMTTNAQGNH
WKQKRKFLVEEAMLLNEITCNLFYTSDQSAAGVKEDKPEDIGQASMVNTPEDNKVDIEAF
SQFTKIITPAITRVVDFAKKLPMFCDLPCEDQIKLLKGCCMEIMSLRAAVRYDPESETLT
LNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSV
DRIERCQEEFLLAFEHYIHYRKHKVSHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTE
LFPPLFLEVFED
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctcccccggctggaaagatgaggccattcagaatgag
ccagcagaaaattgctcccccggctggaaagatgaggccattcagaatgggtatattccc
agttacctggacaaggatgagctctgtgtcgtgtgcggggacaaagccacgggttatcac
tatcgctgcatcacctgtgaagggtgcaagggattcttcaggcggacgatccagaagaac
ttgaacccgacgtacgcctgtaaatacgagggaaattgcgtcatcgacaaagtgacgagg
aaccagtgccaggaatgtcgcttcaagaagtgcatcgcggtgggaatggcaaccgacttg
gtgttgaacgacagcaagaggctggcgaagaggaaactgatcgaggaaaaccggcaacgc
cgtcggaaagaagaactccagaagactgtgtgggatcgccaggaaccgacgcaggaggag
tgggatctgatccgaatggtgacggacgcccacatgaccacgaacgcacaaggaaaccac
tggaaacagaagcggaaattcctggtcgaggaagcaatgcttcttaatgaaataacatgt
aatttattctatacttctgaccagagtgctgcaggggtgaaggaagataagcctgaggat
attggtcaagcgtcgatggtcaatacgccggaagacaacaaagtggatatagaagccttc
agtcagtttacaaaaattatcacccctgccataacccgagtggtggactttgccaaaaaa
ctgcctatgttttgtgatctgccttgtgaagaccagatcaaactgctgaaaggctgctgc
atggagatcatgtctctgcgagcggcggtccgatacgacccagagagtgaaaccctgacg
ctcaacggagagatggccgtcacgcgaggacagcttaaaaacggaggcctgggcgtggtt
tcggatgccatctttgacctcggcgtgtcgttgtcgtcctttaacttggacgactccgaa
gtggctcttcttcaggccgttatcctgctttcatctgatcgtccgggcctgaccagcgtg
gatcggatcgagcgttgccaagaggagttcctgctggccttcgaacattacatccactac
cggaagcacaaggtgtctcacttctggcccaagctgctgatgaaagtcaccgatctgagg
atgatcggagcgtgccacgccagccgcttcctgcacatgaaagtggagtgtcccaccgag
ctattccctcccctcttcctggaggtcttcgaggactga
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