Trematomus bernacchii (emerald rockcod): 117483063
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Entry
117483063 CDS
T09643
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117483063 (cbll1)
04131 Membrane trafficking [BR:
tben04131
]
117483063 (cbll1)
04121 Ubiquitin system [BR:
tben04121
]
117483063 (cbll1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117483063 (cbll1)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117483063 (cbll1)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117483063 (cbll1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117483063 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117483063
NCBI-ProteinID:
XP_033987109
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MDQSDNDLQGSDGSGCLGGPDVRRRIPIKLISKQPLRSKPPPRTQRPSSRPPKVEPGEDE
KFAFKQEERFDCGGKAGDVFANQRRFPQALFWDFKLHLIGEKDDVPVHFCDKCGLPIQLY
GRMIPCKHVFCYDCALLHEKKGEKMCPGLTMFSCTDPVQRIEQCLRGSLYMCSVVPGCKR
TYLSQRDLQAHVNHRHMRAPKSSSGRQDPVHLPPPASEVLDRFRVPPPHLAKNHVHLPNP
LQHGSHDPYNQPPPPTAHEAPPANAIGPETFRIATVTTRKHSNLITVPIHDDSSSSRDAG
PGPTQQQQQQQQQQQQQQQQPPPHHHPGDYPGQPPVGPHSHHMMAPPQQHFGPPPPPPPP
INHPMQHPPQASGTPHMVYNQAPPPPMSSAPPPITPPPGHIMGQMPPYMNHPPPGPPPQH
SGPPVNAPPPHHYNPNSMQQFPEDQGTLSPPFTQPGGLSPGMWPAPRGPPPPRMQGPPLQ
GQMPGPHHPDQGRYRPYYQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgacaatgatcttcaaggaagtgatggttctgggtgtttgggtggccca
gatgttcgcagacgaatccccatcaaactcatatccaagcagcctttaaggagcaaacct
ccgccccgcacccagagacccagcagcagacccccgaaagtagagcctggagaagatgag
aaatttgccttcaagcaagaggagagatttgattgtggaggtaaagctggtgatgtcttt
gcaaatcagagaagattcccccaggcactgttttgggactttaagttgcatttgattgga
gaaaaggatgacgtaccagttcacttttgtgataaatgtggacttcctatccagctatac
ggacggatgatcccctgcaaacatgttttctgttatgactgtgcattgcttcatgagaag
aaaggagagaagatgtgcccaggcctcaccatgttcagctgcacagacccggtccagcgc
atcgagcagtgtctgcgcggctcgctctacatgtgcagcgtcgtacctggatgtaaacgc
acgtacctgtcccagcgagacctgcaggcgcacgtgaaccaccgtcacatgagggccccc
aaatcctcctctggccgtcaggaccccgtccacctgcccccgcctgcctccgaagtcctg
gaccgtttccgcgttcctcctcctcacttagccaaaaaccacgtccacctgcccaaccct
ctgcagcacggcagccacgacccttacaaccaaccaccgccacctaccgctcacgaagcc
ccgcccgcaaacgctattggacccgagacattccgcatcgccaccgtaacgacacgtaaa
cacagcaatctcatcacggtgccgattcacgacgactcttcttcttcacgtgatgctgga
ccgggccccacgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
ccgcccccccaccatcacccgggggattatcccggtcagccgcctgtaggaccccactcc
caccacatgatggcgccaccacagcagcactttgggcccccgcctcccccaccacctccc
attaatcaccccatgcagcatcctccccaggcatcaggtacgcctcacatggtgtacaac
caggcccctcctcctcccatgtcctccgctcccccgccaatcacccctccaccggggcac
atcatgggtcagatgcccccctatatgaaccaccctcccccgggacccccaccccaacac
agcggcccccctgtgaacgccccaccgcctcatcactacaacccaaactccatgcagcag
tttccagaggaccagggcactcttagtcctccgtttacccagccaggaggcctcagtcct
gggatgtggccggctcccagagggcccccacctccacgaatgcagggtcctcctctccag
ggccaaatgcccggaccccaccacccagatcagggtcgctaccggccttattatcagtaa
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