Trematomus bernacchii (emerald rockcod): 117483124
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Entry
117483124 CDS
T09643
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117483124
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
FERM domain-containing proteins
117483124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
117483124
NCBI-ProteinID:
XP_033987192
LinkDB
All DBs
Position
Unknown
AA seq
2114 aa
AA seq
DB search
MEVQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSHSLSRERVGVDGKSECSGSDQRNYP
FRFIVQIQRDLDLNSHGLTLSYTTPILVQEVTPGGPADGRLVPGDQLVKINNIAVDDLTP
EQAAEIIRECQDTLTMTVLRTMLGPKSSFITPEKRAKLRSNPVKVHFAEEVEVNGHSQGN
SLLFLPNVLKVYLENGQTKAFKFDPSTTVKDIVMTLKEKLSLSRIEHFSLVLEQQHSITK
LLLLHDEERIQQVVQKKEAHDYRCLFRVCFLPKSLHTLLQEDPAAFEYLYLQGVNDVLQE
RFAIEMRCNTALRLAALHIQERLASCGHSQKTNLKMITKTWGIENFVSSTLLRNMREKDL
KKAITYHMKKSQSQNDPKQKGLSVDQTRINYLEELCELKSFGGKSFSATMMLQDRESMVT
LLVGARYGVSQVVNHKLSILSTLTEFTCITRIELLPESDKVSLVKIYLQDIKPITLLLES
AAAKDMSCLIAGYCRVFVDPNLNIFPWIHVSKKHRVSAEEGYVSRCGSDSDTSSDLGMDA
LITKASHDDRPRPRIRSSSDPDGRKRKDRNRRRNKDSKEKGDKAWEENTKQKEEKDADTE
KDKSPESKNRESKNEETQNKEETEKLQEGQQTKIEIRDKYSGELRENAGQESRCDEDVHA
AEEHPSVSEASDSLNTDSRVITSPSSDSLDALEEDDLVSCSSSFTVLPNAPSLTLNSHFP
LQLHHYSHNQVHPHLLAPPPAHAHPLIHLTADDRRQGGGLWRSDDGADPQLLSSVPPSSS
LHCIQKCPSNPCSDDSSLCFAELSRLVDFLPSPPEASDDDEEAEEELRRRKRRKGKMLKE
TGECVRGESGSISVEGSLREHPLTSSPSSSNLEFVFNFDQSDARCYYKLCSNITPDSARS
LPCPPDHNEGGDWVKVKADPAEAVYLEPIPILQPPPGFGDSSSDEEFFDARDRFTSPVDP
ALDAMPRDIRSEMKLDFHSTLSLSDISVSVADADREEEKEEDRKDVEEEGGGIETLFQLR
KRSRKRRSFVETDFTSTVSFPEPDPEKPDQVFNRLRNSMLADSNDAEMLSLDPEPSEQTQ
NPCPTVSSLNHSEGEPAQLESKPILSKPRLHGCSSPCGVGSHEQSRDPSRSRKQEMEMEP
DAMESKSVTDLVKAASPTITIVRCRMDPDEKEERKEKVEMDKEKDEEEETSGVSGNGPFI
NHMFLPEYTKEGGKGEEEKTEGVEGYLASSDRSLIEAQKQPEANTLPTCLKDVNTKSSNG
LFGAHVIAVEEHLLKGVCENSNPHSYSPPPPPPTTPLPVLPKSQSDCFVSGKGSIKNTGS
STKMSLSNSEMSLGKQGPTEKAQLYLDVTTRVNEEDTIGVSTPTDSTNSDNVFDDDEVGN
SLHSGSSKNNDLAIATKHTISANVVSAGKGESQIPIMSPTNTEAHSIMKSGSSDYTRAIN
SITAKLGAATSATSPTFNAGARLQSEALYESVLGLNQIVDKPSDCSIPSPETKDSLASPS
LAKADTATIHNLSKAPPSPPHFLFQTCSPSFMGRLSSSTLRRKIQNLPLYLSRSQESLHQ
AGVGDVAQSPAKDNSSEGITIKVTDVDEVTQTIDFDRGTAESVESDDSDTTVTGSDVEGE
YYFNTHSENSLSPVSEMKEVGSPLPVQAEPKPQHQNQLRYHKPNKNTPGPITEPPVSIVN
SLQKDTSGLKMDTPGPIKHSPESKIKVTSPGEDIQGYKMNINDLSCSIPSPIVVTTQNLN
GPGLPFHNQSQIVGQTSGDRPLMGLCRAPVQTSDSPKTLSSVCKVFTICEDPSKTKGPVE
VGSAQALKTQFGCNSLQESVCESVVEGLQVPLDACGCPTLPYTNCFGSGDSFDEELTVYE
FSCRTQSSGVTQTSGAGLPLITSPPVPSFLSTSSTFSPSFPRSIHFSTSTSELSPLLSPL
SDASDNFQSQTHKDTISQLGQQRYPEPPTGFQILRVDVDQLLTILESSGADRSMANHGGR
HPRDTCPAHFTENKRVLQIEARRLMSGCQEVVGIGQSPEEMLLSLANSFRTLVELAGICL
WFSGCERCDRRNAEAVAGLADVARSFRDFCLAAERASSKRSCQDLSTKLLAKQCTALTAS
VFCLTQLFRTLTAL
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcaggacaggagccgctccccttcccgtagaaccagccgggtagagcaggtg
gtgggacgatggctgagaaggtcccgagacctgggcagcaggtctcactctctgagcaga
gagcgtgttggagtggatgggaagtcagagtgcagcggctccgatcagaggaattacccc
ttccgcttcatcgttcagatccaacgggacctggacctcaactctcacggcctcactcta
tcctacaccacccccatcctggtgcaggaggtcaccccaggtgggcccgcagatggccgg
ctcgtccctggcgaccagctcgtgaagatcaataacatcgctgtcgatgacctgaccccg
gagcaagctgctgaaataatcagggagtgtcaagatacgttgaccatgactgtcctcaga
acaatgctgggccccaagtcatcgttcatcacaccagagaagagggccaagctccggtcc
aaccctgtgaaggtccactttgctgaggaggtggaggtcaacgggcactctcagggcaac
tcgctgctcttcctgcccaacgttctgaaggtgtatctggagaacgggcagaccaaggcc
tttaaattcgaccccagcaccacagtcaaggacattgtgatgacactgaaggaaaagctt
tctctaagccgcattgaacacttctccctggtgctggagcagcagcacagcatcaccaaa
ctactgctgctgcatgatgaggagaggatacagcaggtggtccagaagaaagaggcccat
gactacagatgtctgttccgtgtttgtttcttgccgaaaagcctccacacgctgctgcag
gaagatcccgctgcctttgagtacctctacctgcagggtgtgaacgatgtgctgcaggag
cgctttgcaatagagatgcggtgtaacacggccctgcgactcgccgctctgcacatccag
gagaggctggcgagctgtggacactcacagaagaccaacttgaagatgatcacgaagacg
tggggcatagagaactttgtgtcatccaccctgttgagaaacatgcgagagaaagacctg
aagaaagccatcacttaccatatgaagaagagccaatcacagaacgaccccaagcagaag
ggcctgtcagtggatcagactcgcatcaactacctggaggagctgtgtgagctcaagtca
ttcggagggaaatccttcagtgccaccatgatgcttcaggacagggagtcaatggtgacc
ttgttggtgggggcgcgctacggggtgagtcaggtggtcaaccacaaactgagcattctg
tccaccctcacagagttcacctgcatcacacgcatcgagctgctgcctgaatccgacaag
gtcagcctggtcaaaatatacctgcaggacatcaagcccatcacattactattggagtca
gcggccgccaaagatatgtcctgcctaatagcagggtactgtcgagtgtttgttgacccc
aacctgaacatcttcccctggatacatgtgtccaagaagcaccgagtgtctgctgaggaa
ggttacgtgtcacggtgtggcagtgactcggacacctcctcagacttgggcatggacgcg
ctgatcaccaaggcgtcacatgacgataggccacgccctcgcatcagatcctcatcagac
ccagacgggagaaaaagaaaagacagaaacagaaggagaaacaaagacagcaaagaaaag
ggggataaagcatgggaggagaatacgaagcaaaaggaagaaaaggatgctgacacggaa
aaggacaagtctccagagagtaaaaacagagagagtaagaatgaagagacacagaacaaa
gaggagacggaaaagctgcaggagggtcagcaaacaaagatcgagataagggacaaatat
tctggggaactacgggagaacgcgggacaagaaagtcgatgtgacgaagacgttcatgcg
gcagaggagcatccttcggtgtcagaagcatctgattctctgaacacagactctcgtgtc
atcaccagcccctccagcgactccctcgacgctttggaggaagacgacctagtttcatgt
tcttcctcgttcactgtcctccccaacgctccctcactaacactcaatagccactttccc
cttcagctccaccattactcccacaatcaggttcaccctcatctcctcgcccctccacca
gctcacgcccatcccctcatccacctcacagctgacgacagacgacaaggaggaggcctc
tggaggtccgacgacggagccgatccccaactcctctcctccgtccccccctcttcgagc
cttcactgcatccaaaaatgtcccagcaacccctgctccgacgacagctccctgtgtttc
gccgagctctcccgcctggtggacttcctgccgagccctccagaggccagcgacgacgat
gaagaggcagaagaggagttaaggaggaggaagaggaggaaggggaagatgttgaaagaa
acaggagagtgtgtgagaggtgaaagtggaagcataagcgtggagggcagtctcagagaa
cacccactaacctcctccccatcctcctccaacctggagtttgtcttcaacttcgaccaa
agtgacgctcgctgctactacaaactctgctccaacatcacccccgacagcgcccgcagc
cttccctgccccccggatcataacgagggaggagattgggtgaaggtgaaggcagatccg
gctgaggcggtttacctggagcccatccccatccttcagccaccaccggggtttggagac
agcagctctgacgaggagttcttcgacgccagagatcgcttcacctcgcctgtggaccca
gccttagacgccatgccaagagatattcgctcagagatgaaactggacttccacagcaca
ctcagcctgagtgacatcagtgtctcggtggcagacgcagacagagaagaagaaaaagaa
gaagacagaaaagacgtagaggaggaaggaggaggcatagaaacattgttccagctcaga
aaaagatctcggaagcgacgttccttcgtggaaactgatttcacctctacggtgtcattt
ccggagccagatccagaaaagccagaccaagttttcaacaggcttcgtaacagcatgttg
gcagattctaatgatgcagagatgctgagtttagatcctgaaccttcagaacaaacgcag
aacccctgtcctactgtctcctctttgaatcactccgaaggggaaccggctcagctcgag
tccaaacccatcctgtccaaaccccgcttgcatggatgtagctctccttgtggtgtgggg
tctcatgagcaaagtagagacccctcgagaagcaggaaacaggaaatggagatggaaccc
gatgcaatggaatcgaaatcggtcacagatttggtgaaggcagcgtctcctacgataact
attgtccgctgccggatggatccagacgagaaggaggaaaggaaagaaaaggtggagatg
gataaggagaaagacgaggaagaggaaacatcaggtgtgtcagggaatgggccgttcatt
aatcatatgtttttgccagaatacactaaggagggaggtaagggggaagaagagaagacg
gagggggtggaagggtacttagcgagttcagatagatcacttatagaagctcagaagcaa
ccggaggccaacacgctgcctacatgtttgaaagatgttaatacaaagagtagtaatggc
ctttttggagcacatgtgattgccgtagaggaacatctacttaaaggtgtgtgtgaaaat
tcaaaccctcactcatactcaccaccaccccctccacccacaacccctctaccagttctt
cccaaatcacagagtgactgttttgttagtggaaaaggcagcattaaaaacacggggtcc
tcaaccaaaatgtctttatctaattctgagatgtcactgggcaaacaaggtcccactgaa
aaagcacaactatatttagacgtcaccacccgtgttaatgaggaagacaccatcggtgtt
agcactcctaccgacagcaccaattcagacaatgtttttgatgatgatgaagtgggtaac
tccttacattctggttcaagtaagaacaatgatttggctatagctacaaagcataccatc
agtgcaaatgtggttagtgcaggtaaaggtgagtctcaaattcctatcatgtctcctacc
aacactgaagctcactcaataatgaaatcaggaagttctgattatactcgagccataaac
tctatcactgcaaagcttggagctgcaacaagtgccacatctcctacatttaatgcaggt
gccagattgcaaagtgaggctttgtatgaaagtgttttaggtttgaatcaaatagtagac
aaacccagtgactgctctattccaagtcctgaaactaaagatagtttggctagtcctagc
ttggcgaaagctgatacagccacaatccacaatctctccaaagcgcctccttctccacct
cacttcctcttccagacctgttctccaagctttatgggtcgcttatcttcctccacacta
agaaggaagattcaaaatttgcccctttatctatcacgctcccaggaatccctccaccaa
gctggggtgggggatgtagctcagagtcctgctaaggataacagtagcgaagggataacc
atcaaagttacggacgttgacgaggtcacacaaaccatagacttcgataggggcactgca
gaatcagtggagtcggatgattcagatacaacagttacaggatccgatgtggaaggggaa
tattatttcaacacacattcagaaaatagtttatctccggtgtcagagatgaaagaagta
ggctctccgttgcctgttcaggctgagccaaaaccccaacaccaaaatcaacttcggtac
cataaacctaacaagaacacaccgggaccaataacagagcctccagtctccatagtaaac
agcctccagaaagacacttcaggcctaaagatggacactcctggccctataaaacattct
ccagaatcaaagataaaggtcacaagtccaggtgaggacattcaaggttataaaatgaac
ataaatgatctgtcgtgttccataccctctccaatagtggtgaccacacagaatctaaac
gggccaggtctcccatttcataatcagtcccagatagtaggacagaccagtggcgacaga
cctttgatgggtctttgtagagctccagtgcagacttccgactcaccaaaaacactttct
tccgtctgcaaggtctttaccatctgtgaggatccgtccaagacaaagggcccagtcgag
gtgggatctgcacaagccttgaagactcagtttggctgcaattctttgcaagagtcggta
tgtgagtcggttgtggaagggttgcaagtgccgctggatgcttgtggttgtccaacgttg
ccctacacaaactgcttcggcagcggggacagctttgacgaggagctgacggtctacgag
ttctcctgccgcactcagagcagcggcgtgacgcagacttcaggagcaggtcttcctctc
atcacctccccacctgttccctcctttctctccacctcttccaccttctctccgtccttc
ccgcgctccatccatttctccacctctacctctgagctcagccctctcctctcaccgttg
tctgacgcctcagacaatttccagtctcaaacgcacaaggacaccatcagtcagctaggc
cagcagcgctacccagaacccccaacaggattccagatacttcgcgtggacgtggatcag
ctccttacgattctggaaagcagcggtgctgaccgatctatggcaaaccatggaggtcgc
caccctagagacacctgtccggcccactttacagagaacaagagggtgctgcagatagag
gcacggcggctgatgtcaggctgccaggaggtggtgggtatcggacagagcccagaagag
atgctcctttccctggccaacagtttccggaccctggttgagttggcaggtatatgcctc
tggttctctggttgtgaaaggtgcgaccggaggaacgcagaggcggtcgcaggtctggct
gacgtggctcgttcgttcagagacttctgtctggccgcagagcgagccagcagcaagcgc
agctgccaggatctgagcaccaagctgctagccaaacagtgcaccgcgctcactgcctcg
gttttctgcctcactcagctgttccgcaccctcactgcactatga
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integrated database retrieval system
