Trematomus bernacchii (emerald rockcod): 117483126
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Entry
117483126 CDS
T09643
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117483126
Membrane trafficking [BR:
tben04131
]
Protein recycling
Others
Others
117483126
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
117483126
NCBI-ProteinID:
XP_033987208
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Position
Unknown
AA seq
1224 aa
AA seq
DB search
MEKDLIFSPKWHLVFCFLILMMFHAAEAEITCRSCQSGNKWRARELMLKFDTSESATGLK
REVVGQGDGAGRSASAESVRLPCAVGSVECAPAPAEHTEPRRNIDAKNKNVESEKMKVSN
VKTSQESSPGLTFSRKRARRSSDDGEEITSPAQSQDPGEGARRVPRWSGEDRRGAGAPRH
DELKVDSTTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGA
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQVVHERVAPNRFYWSKMGLDKEPGLIHLE
TSISEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSAAGRPIYYVSAK
RDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALENV
VSSMGHEGNVMVDLYEVAGIKGMFLANRKMDSQVKTHITYNRGRDWSLLQAPSKDLRGNS
IHCELPYCSLHLHLHVSANPYTSGNIASRDSAPGIIVASGTIGAELTSTNISVYVASDAG
NTWRQIFDEEYAVLYLDQGGALVAIKHTPLPIRHLWLSFDEGQQWKKYSFTNTPLFVDGV
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIEEDYQTWHLHNQGKSCLMGVK
RIYRKLKPSSRCVMGKTYSVSMTSGPCDCTEADFECDYGYERRTDGKCTPAFWFHPSSMS
RSCTTGMTFLNSTGYRKVVSNNCTSGVSVEYTSRRQQCPIQAPKGLHLVTSEGTLSATLG
TNVTFLVFLEEGDGARTSITLDFGDGRALTYSNVSSIEDGIKHVYKAVGIYRVTATGENI
LGSETVMLYLHVTCQLEHIHLSAPFVAVKNKEVNLTAVLLPSQVGTVTYIWWIGNNTEQP
VITLEGSVACTFSREGINAVTVQVSAGNIILQDRKAIAVHEYFRSHLLAFSSNLDDHNPD
VAEWRQDVSRVIKKSLIQATGVRDDQILVTILPGLPTAAEFFLLPDKQLTEGKAEKSSAH
LDQLSEVLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSIVVV
GLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPANPTETTPSSQRDLVHSLEILDTEFN
SRPIGCMKPHVHVKFSTELPTYIV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatctcatatttagcccaaagtggcaccttgtgttttgctttttgattttg
atgatgttccatgccgccgaagcggagataacttgcaggtcgtgccagtctggaaataag
tggcgcgctcgggaattaatgctaaaattcgacacgagtgagtccgcaacaggattaaag
agagaggttgttggacagggagacggggcagggagatctgcaagtgcggaaagtgtgcgg
ctcccctgcgcagttggctccgttgaatgcgctccagctccggcggaacacacggagccg
agacggaatatagacgcaaaaaacaaaaatgttgagagcgagaaaatgaaagtttccaat
gtcaaaacgagtcaggagagcagcccgggtttgacttttagcagaaagcgtgccaggagg
agcagtgatgacggggaggaaatcacatccccagcccagagtcaggacccgggagagggc
gcgcgcagagttccgcgctggagcggagaggaccgtagaggagccggcgctccgaggcac
gacgagctgaaagttgacagcacaacgttcgccttgaccggggactcctctcacaaccag
gctatggtgcactggtccggccagaacagcagtgtgattttgatgctgaccaaactattt
gacttcaacctcaacagtgtgacagagagttcattatggaggtcaactgactacggagca
acgtaccagaagcttaatgagaaagtgggagcaaagacaatactgagttatttgtacgtg
agccccaacaacaagagaaagatcatgctgctgactgatcccgaggtggagagcagtctg
ctgatcagctctgatgaaggagcgacctaccagaagtaccgcctcaacttctacatcctc
agcctgctcttccaccccgagcaggaggactggatcctggcttacagccacgaccaaaag
ctctacagctcggtggagtttggaaggagatggcaggtggttcacgagagagtggctccc
aatcgcttctactggtcgaaaatgggtttggacaaagagccgggcttaattcacctggaa
accagcatctctgaaggacaggcgctgtatgtcacctgcaagctgcaaaactgcacagat
gccaacaagggcaaaccattcccgggctacattgaccccaattctctggtggtgcaagat
gagtatgtgtttgtccaggtgtcagccgcggggaggccaatctactatgtgtctgctaaa
agagatgtcttcacaccaatgaagctacccaagtacacactgcccaaggacctgcatgtg
atcagcacagatgagaaccgtgtggttgcggcagtacaggagtggaaccagaacgaaacc
tacaacctgtacgtgtcggacacgtcgggggtgtactacaccctggctcttgagaacgtg
gtcagcagcatgggccacgagggtaacgtcatggtggacctctatgaggtagctggaata
aaggggatgttcctcgccaacagaaagatggatagccaagtgaagacacacatcacctac
aacagaggcagagactggagcctcctgcaagccccgagcaaagacctgaggggcaacagc
atccactgtgagctgccctactgttcattacatctccatctacacgtctccgcaaatccc
tacacatctggaaacatagccagcagggactcagcgccggggatcattgtcgcgtcagga
accatcggcgcagagctcacctccaccaacattagtgtgtacgtcgcctcagatgcagga
aacacatggagacagatctttgacgaggagtatgcagtgctgtatctcgaccaaggagga
gccttagtcgcaataaaacacactccacttcccatccgacacctgtggttgagttttgac
gaaggacaacagtggaagaagtacagcttcaccaacacgcctctgtttgtggacggggtg
ctgggcgagcctggggaggagactctcatcatgacgatattcggccacgtcagtcatcgc
tcagagtggcagctggtgaagatcgacttcaggtccatcttcaacaggaggtgtatagag
gaggactatcagacatggcaccttcacaaccagggcaagtcctgcctcatgggagtgaaa
aggatctacaggaagctgaagccctcgtccaggtgtgttatgggaaagacgtattctgtt
tctatgacgtctggcccctgtgactgtactgaggctgactttgaatgtgattatggctac
gagagacggaccgacggcaagtgcacccccgccttttggttccatccatcatccatgtcc
aggagttgtaccacagggatgacgttcctgaacagcaccggctacaggaaagttgtctcc
aataactgcacgtctggagtcagtgtggagtacacctcccgcaggcagcagtgtcccatc
caggcccccaaaggtctccacctggtcaccagtgagggcacgctgtcagccactctgggc
accaatgtcaccttcctggtttttctggaggagggcgacggggcgaggacaagcattacc
ctggacttcggagacggccgcgctctgacctactccaacgtgagctctattgaggacggg
atcaaacacgtctacaaagctgtgggaatataccgagtgacggccacaggggagaacatc
cttggctcagagacagtcatgctctatctgcatgtaacatgtcagctggagcatatccat
ctctcagctccctttgtggcggtaaagaataaggaagtgaacttgactgctgttctgctg
cccagccaagtgggaacggtcacctacatctggtggatcggaaataacaccgagcaaccg
gtaatcaccctggagggaagtgtggcttgcacgttctcccgggaaggcatcaatgcagtc
actgtgcaggtgtccgcagggaatattattctgcaggacagaaaagccatcgctgtccac
gaatatttccgctctcatctgctcgccttttcatcaaacctggacgaccacaaccctgat
gttgcagaatggaggcaggacgtgagccgagtcatcaagaagtctctgatccaggccaca
ggtgtgcgcgacgatcagatcttggtcaccatcctcccaggtttacctacagctgcagag
tttttccttctacccgacaaacagctcactgagggcaaagcggagaagagctctgctcat
ttagatcagctctctgaggttttgctcagcgccttgaatcaaaaccttgtccagttcacg
ttgcggccaggagtccaagtcaccgtgtacgcagcacatttatcagcagcgcccctagtg
gacaccagcgagaaccacagtggctctgctatgctaatgctgctatcaatagtggttgtg
ggcttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctat
gcgcagatgcagaacgaaaaagaacaagaaatgatgagtccagctaatcctacagagacc
acgccaagctcacagcgggacttggtgcattctttggagattctggacacagagtttaac
tcacggcccataggatgtatgaaacctcatgtacatgtgaaattctccacagaactcccc
acatacatcgtctaa
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