KEGG   Trematomus bernacchii (emerald rockcod): 117483151
Entry
117483151         CDS       T09643                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tben01009]
    117483151 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117483151 (kdm5a)
Enzymes [BR:tben01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117483151 (kdm5a)
Protein phosphatases and associated proteins [BR:tben01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117483151 (kdm5a)
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117483151 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5
Other DBs
NCBI-GeneID: 117483151
NCBI-ProteinID: XP_033987244
LinkDB
Position
Unknown
AA seq 1739 aa
MSAFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKTRFPHVERKVLDLYQLSKTVSS
EGGFEAVCKEKRWSKVAGRMGFPAGKGTGSLLRSHYERILYPYELFQSGATLTGIQRLYE
ECDDGEDVDEGVGEESVEEEELDEEDEKDGDGDAMQAKERLLPERRSRRLKSERENKEPK
GLKIFSTSPKMVNLGILSADDGFSRKQRHLKAQAFAIKMRPRKETLEVNFIPQIDLYLCL
VCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQA
GREYSLQSFGEMADQFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKD
VGSGFPVRDGKRRLLGDEEDYANSGWNLNNMSVLEQSVLTHINVDISGMKVPWLYVGMCF
SSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELFDSQPDLLHQLV
TIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQ
CVSHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVCKEIGAMMEEETKLRQAVQEMG
ILSSEQEVFELLPDDERQCYKCKTTCFLSALTCPCSPDRLVCLTHAADLCDCALGNKCLR
YRYDLEEFPAMLYGVKIRAQSYDTWAKRVSDGLAADQKNKKDLIELKVLLEDAEDRKYPE
KALFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRTKLTVDELKAFVDQLYR
LPCIISQARQVKELLENVEDFHERAQVALSDEMPDSSKLQALLDLGSGLDVELPELPRLK
QELQQARWLDEVRITLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSERW
EDKARGCLQARPRHSLVTLESIVLEARNIPAYLPNILALREALQKAKEWTSKVEAIQSGS
SFAYLEQLESLLARGRSIPVRLDPLGQVESQVASARAWRERTARTFLKKNSTYTLLQVLS
PRIDIGIYGNSKSKRKRVKELMEKERGGFDPDALSDLEESLEEAREPSTVVAAFKSKEHK
EVESIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKTGT
QKKTGVGWQSNTKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERA
MSWQDRARQSLATDELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHI
QTFQQSGFSRAASPRQSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSE
EVVSHMWPVVTPSFCAEHAYSSASKSCVQNMTPRKQPRKTPLVPRSLEPPVLELSSQAKA
QLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMDKPLKLKLKESE
KKRKRKLERAEHHHMLMAAAAAAGGGSVMGEMRPGKNKELKRVGLELGLGIKPKKKKLKL
NMDKNREMKQIAKRLAKEEKERKRKEKLVAKAEAMRDVLEKRKEKKILDIPSKYDWSGAE
DSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVTCEMAENEDYVCMDCIGK
AGGGDLGVTVEEVAEESVVVLSTSMCSVQSLPSVVASWSHTPTLLHPAASHQPEPQQGS
NT seq 5220 nt   +upstreamnt  +downstreamnt
atgtctgcatttgcagagttcgtcccccctccggaatgccccgtttttgagccgagttgg
gaggatttctcggatcctttaggatttatcaacaagatccgacccattgcagagaaaacg
ggaatctgcaagatccgaccccccgaggactggcagcctccgtttgcctgcgatgtacgc
aacttccgcttcactccgcgagtgcagagactgaatgagcttgaggccctcactagggtt
aaactcaacttcctggatcaaatcgcaaagttctgggagctgcagggatccaagaccaga
ttccctcatgtggagagaaaagtgttggacctctatcagctcagcaagactgtgtcctca
gagggcggctttgaggcggtgtgcaaagagaagaggtggtccaaggtggccggcaggatg
ggcttcccggcggggaaaggcaccggctccctgctgcgctcccactacgagaggatcctc
tatccatacgaactcttccagtcgggggccacgctcactggcatccagcggctatatgag
gaatgtgatgatggggaagatgtggacgagggagtcggtgaggagtcggtggaggaagag
gagctggatgaggaggatgagaaagatggagacggggatgcgatgcaggccaaagagagg
ctcctgcctgagagacgctccaggcgccttaaatctgagagggaaaacaaggagcctaaa
ggcctaaagatcttcagcacaagtcccaagatggtcaacttgggaattctatcagctgat
gacggattcagcaggaagcagcgtcacctcaaagcccaggccttcgccattaaaatgcga
ccccgcaaggagaccctggaggtcaactttataccccagatcgacctgtacctctgcctg
gtgtgtgggcggggcgatgaggaggaccgcctcctgctgtgtgacggatgtgacgacagc
taccacaccttctgtctgatcccgcccctgcaggacgtgcccaagggggactggcgctgc
cctaagtgtgttgctgaggagtgcagtaagcccagagaggcctttggctttgagcaggcg
gggagggagtactctctgcagagcttcggagaaatggctgaccaattcaagtcggactac
ttcaacatgcctgttcatatggtccccacggagttggtggagaaagagttctggcgcctg
gtcagcagcatcgaggaggacgtcatcgtggagtacggcgctgacatcagctcgaaagac
gtgggcagcgggtttcctgtcagggacgggaagaggaggctactgggagatgaagaggat
tatgccaactcgggctggaacctgaacaacatgtcggtgctggagcagtcggtgctcaca
cacatcaatgtggacatctcgggtatgaaggtgccctggctctacgtgggcatgtgcttc
tcctctttctgctggcacatcgaggaccactggagttactccatcaacttcctgcactgg
ggtgagccgaagacttggtacggcgtgccggcctctgcagcggagaagctggaggctgta
atgaaaaagttggctccggagctgtttgactcccagcctgacctcctccatcaactggtc
accatcatgaatcccaacgtcctcatggagcacggtgtccctgtgtacaggaccaatcag
tgtgcaggggagtttgtggtgaccttccccagggcctatcacagcggcttcaatcagggc
tacaacttcgcagaggccgtcaacttctgcaccgcggactggttacccatgggtcgtcag
tgtgtatcccattaccgacgcctccaccgctactgcgtcttctcccacgaggagctgctc
tgcaagatggctgctgatccagagagtctggacgtggagctggctgccgctgtctgcaag
gaaataggagccatgatggaggaggagactaaactcagacaggctgttcaggaaatgggg
attttgtcttcagagcaggaggtgtttgaacttctcccagacgatgaacgccagtgctac
aagtgcaagacgacgtgtttcctgtctgctctgacctgcccctgcagccccgacagactg
gtgtgtctcacgcacgcagcagatctctgtgactgtgccctcggcaacaagtgtctccgg
tatcgctatgatctggaggagtttcctgccatgctgtacggggtcaagatccgggctcag
tcttacgacacctgggcaaagagggtcagcgatggcttggctgccgaccagaaaaacaag
aaagatcttattgagctcaaggtcttgctggaggatgcagaggacaggaagtaccccgag
aaagctttgttccgtcgcctgagggagatggtcaaagaggcggagacgtgctcctcagtc
gctcagctgctgctcagccgcaagcaaaggcacagcagccgcctgcgttctgagagcagt
cgtaatcgtacaaaactgacggtggatgagctcaaggcctttgtggatcagctctacagg
ctgccctgcatcatcagccaggcccgacaagtcaaagagttactggagaacgtggaggac
ttccacgagcgagcccaggtggcgctgtcagacgagatgcccgattcctccaagctgcag
gccctgctggatctaggcagcggtctggatgtggagctgccggagctgccccgactcaaa
caggagctgcaacaggcccgctggctggatgaggtgcgcatcaccctggcagagcctcac
cgcgtcaccctggagctgatgaagaggctgatagactcgggggtcggcctggccccccac
cacgctgtggagaaggccatggccgagctgcaggagatcctcaccgtctccgagagatgg
gaggacaaggcccgcggctgccttcaggccaggcctcgacacagcttggtgaccttggag
agcattgtgctggaagctaggaacatcccagcgtacctccctaacatattggccctccgc
gaggccctacagaaggccaaggagtggacttctaaagtggaagccattcagagcggcagt
agcttcgcctacctggagcagctggagagcctgctggcccggggtcgctccatccccgtc
cggctcgacccgctgggccaggtggagtctcaggtggcctcagctcgagcctggagggag
aggacggcgcgcaccttcctcaagaagaactccacgtacacactgctccaggtcctcagt
cctcgcattgacatcggcatctacggcaacagcaagagcaagaggaaacgcgtgaaggag
ctgatggagaaggagagaggaggcttcgaccccgacgccctgagcgacctggaggagagc
ctggaggaggcgcgagagccttccaccgtcgtagcagccttcaaatcaaaggagcataaa
gaggtggagtccatccactcgctccgcgccgctaacttagccaaaatggccatggccgac
cgcatcgaggaggtgaagttctgcctgtgccggaagacggccagcggcttcatgctgcag
tgcgagctctgtaaggactggttccacggagcctgcgtgcctctgcccaaaacgggaacg
cagaagaagactggtgtgggttggcagagcaacaccaaggactccaagttcctgtgtccg
ctgtgtcagaggtcgaggaggccgaggttagagaccatcctgtcgctgcttgtgtcgctg
cagaagctgccggtgcgtcttccagaaggagaagccctgcagtgtttgacagaaagggcg
atgagctggcaggaccgagcgcgtcaatctctggccacggacgagctgtcctcagcgctg
gcgaagctgtctgtgctgagccagcgcatggtggagcaagctgcccgagagaaaacggag
aagatcatcaacgcagagctgcagaaagctgctgccaacccggatttgcagggccacatc
cagacttttcagcagtcaggcttcagtcgagccgcttcacctcgccagtcggtggactac
gatgacgaggagacggactcagacgaggacatcagggagacgtacggttacgacatgaag
gaccccggcgaggtgaagccctacctgttctgcgatgaggagattcccgtgaaatctgaa
gaggtggtcagtcacatgtggccggtcgtcacgccgtcattctgcgccgaacacgcctac
tcttccgcctcaaagtcctgtgtacaaaacatgacgcccaggaagcagcccaggaagacc
cccctggtccctcgcagcctggagccgccggtgctggagctgtcctcgcaggcgaaggcc
cagctggaggagctcatgatgctgggagacctgctggaggtgtccctggatgagacccag
cacatctggaggatcctgcaggccacacaccccccgtctgaggagagattcctgcaggtc
atggagcctgacgactctctgatggataagcctctgaagctcaagctgaaagagtcggag
aagaagaggaagcggaagttggagcgggccgagcaccaccacatgctgatggccgccgcc
gctgccgcaggtggaggttcagtgatgggcgagatgcggccaggcaagaacaaagagctg
aaacgggtgggtctggaactgggacttgggattaaacccaagaaaaagaagctcaagctc
aacatggacaagaatcgggagatgaagcagatcgccaagcgcttagccaaggaggagaag
gagaggaagaggaaggagaagttggtggccaaggcggaggccatgagggacgtgctggag
aagaggaaggagaagaagatcctcgacattccctccaagtacgactggtccggggcggag
gactccaacgacgagaacgctgtgtgcgccgccaagaactgccagagaccctgcaaagat
aaggtggactgggtgcagtgcgacggcggctgcgacgagtggttccaccaggtgtgcgtt
ggcgttacgtgcgaaatggccgaaaacgaggactacgtctgcatggactgcatcggcaag
gccggcgggggggacttaggggtcacggtggaggaggtggcggaggagagcgtcgtagtg
ctgtccacatccatgtgcagtgtgcaaagcctgccatcagtggtggcctcgtggtcgcac
acacccactctactacacccagcagcctcacatcagccagagcctcagcagggcagttag

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