Trematomus bernacchii (emerald rockcod): 117483212
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Entry
117483212 CDS
T09643
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
tben04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117483212 (pparaa)
03320 PPAR signaling pathway
117483212 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117483212 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117483212 (pparaa)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117483212 (pparaa)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117483212 (pparaa)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117483212
NCBI-ProteinID:
XP_033987331
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Position
Unknown
AA seq
476 aa
AA seq
DB search
MAGDLFSPPSPLGDSLLDSPLCGDLMEDLRDISQSIGDDTLGFDFPVYQSTSSGSESSIA
LDTLTPASSPSSGGCGAAGGPEENFSPLNLECRVCSDKASGFHYGVHACEGCKGFFRRTI
RLKLEYDKCERNCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKLKLKAESKK
VEKGVESPMLVDHNILVGQIHEAYMKNFNMNKAKARLILTGKTSKPQPFIIHDMETFQLA
ERTLAAHMVNGDQPESSLQAGQVVLDLGCGELQQREAEARLFHCCQSTSVETVTELTEFA
KAVPGFQNLDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGGGFITREFLKSLRRPF
SDMMEPKFQFATRFNSLELDDSDLALFVAAIICCGDRPGLVDVSPVEQLQESIVQALRLH
LLANHPDNNFLFPRLLQKLADLRELVTEHAQLVQEIKTTEDTSLHPLLQEIYRDMY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggatctctttagccccccgtccccactgggggattccctgctggacagtccg
ctgtgtggagacctgatggaggatctccgtgacatctcccagtccatcggtgacgacacg
ctgggattcgatttccccgtgtaccagagcactagctcggggtctgagagctccatcgca
cttgacactttgaccccggcctccagtccttcgtcggggggttgtggagcagcggggggg
ccggaggagaacttcagccccctcaacttggagtgccgggtgtgctctgacaaggcctcg
ggcttccactacggggtgcacgcctgcgagggctgcaagggtttcttccggagaaccatc
cggttaaagctggagtatgataaatgtgaacgcaactgcaaaatccagaagaagaaccgc
aacaagtgccagtactgccgattccataagtgcctttctgtgggaatgtcccacaatgcc
atccgctttggtcgcatgcctcaggcagagaagctaaagctaaaggcagaaagcaagaag
gtggagaaaggggtggaaagccccatgctggtcgaccacaacattcttgttgggcaaatc
cacgaagcctacatgaagaacttcaacatgaacaaggcgaaagctcggctcatactgact
ggaaagacaagcaagccgcagcctttcatcatccatgacatggagacgttccagctggct
gagaggacgttagcggcccatatggttaacggtgaccaacccgagagcagccttcaagca
gggcaggtggttctggacttggggtgtggggagctccagcagagggaggctgaagccagg
ctcttccactgctgccagagcacctcggtggagacggtcacggagctgacggagttcgca
aaggcagtgccaggtttccagaacctggatctgaacgatcaggtgactctgttgaagtat
ggcgtttacgaagccctcttcaccctcttggcctcctgcatgaacaaagacggcctcctg
gtggcccgtggtggaggctttatcaccagagagttcctcaagagcctacggcggccattt
agcgacatgatggagcccaaattccagtttgccacacgctttaactccctggagcttgac
gacagtgacctggcactctttgtggctgccattatctgctgcggagatcgcccagggctg
gtggatgtgtctccagtggagcagctgcaggaaagcattgttcaggcactacggctccac
ctgctggccaaccacccggacaacaacttcctcttcccgagactgctgcagaaactggct
gacctccgggagctggtcacggagcatgctcagttggtccaggaaatcaaaacaactgag
gacacgtcactgcatccgcttctgcaagagatatacagggacatgtactga
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