Trematomus bernacchii (emerald rockcod): 117483279
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Entry
117483279 CDS
T09643
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117483279 (sorcs3)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Others
Others
117483279 (sorcs3)
Endosome - Lysosome transport
117483279 (sorcs3)
Endosome - Golgi transport
117483279 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
117483279
NCBI-ProteinID:
XP_033987441
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MGTDAGFFPGLHLSLGIWVMIAAHTLQNAQARITCASCTVPVQLHREELQLGMRTDPTEE
PVIKNIRVEFKELDQNTGVDDEQETGVSVEVVPPQDVDGVSTTEPGSNEESHSGSDKAGE
PQKGEDVALRRAKRSGPEFAEFSESGRAGVDAGAPENRGSLFDGHKQVKSDFRWNRQEGR
GNNRQDEPKIISSTFSLTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIGSVTESTLWRS
TDYGSTYDRMNDKVGTKTVLSYLYVCPTNKRKIMVLTDPEFESSMLISSDEGASFQKYRL
TFYILSLLFHHTEEDWALAYSHDQKLYSSVDFGRKWQLIHERVTPSRFYWSVSSLDKEPD
LVHMEAHTPDGNVQYVTCRAQTCTEANRNYPFPGYIDISSLVVQDDYIFIQVPTSGRATY
YVSYNRDLFIQIKLPKYSLPKDLHIVSSDEKQVFAAVQEWNQNDTYNLYLSDTRGIYFTL
ALENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTFMTYNKGRDWRLLQAPATD
LDGNDIHCILPFCSLNLQLQTSENPYLSGTISTKSSAPGIIVATGNIGAELSYNNVGMFI
SSDAGNSWRQIFEEEHNVWFLDKGGALVAVKQPSVPTKHLWVSFDEGRQWTQHSFSAVPL
FVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRQCTEEDYQTWHLHNEGEPC
VMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRGDGNCRPAFWFN
PSTVSRSCSQGQNYFNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKGLLVTSRDGKL
TANLGSNVTFLVHLDEGDSIRTNIQLDFGDGTAVSYSNLSWTEEGIKHVYKSVGIFRVTA
LAENTLGYDTTTLYLHVICPVEHIHLLTPFVVIKNKEVNITAVVLPSHSRTVTYFWWFGN
NTEPVITLDGSISHTFPNDGMHTITVQVAAANTILQDTKTIAVQEFFKSLLLSFSPNLDE
FNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFLLPHKNQSEGKKKS
EEVLEQVSDVIVTALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSSPRHSSSAMLMLLSV
VFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLSEFSASKELME
KELDARIKRGVGNACESTREIPNCTSV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacgctggcttcttcccaggcttgcacttatctctgggtatctgggtgatg
atagccgcgcataccctccaaaatgcccaggcgaggataacttgcgcatcttgcacggtg
ccagtgcaacttcaccgggaggaattacagctggggatgcgcactgacccgaccgaggag
ccggtcataaaaaacatccgagtagagtttaaggaactcgaccaaaatactggagtggac
gacgagcaggagacaggcgtttctgtcgaggttgtcccccctcaagatgtggatggagtt
agtacaacagaaccagggtccaatgaagaaagtcacagcggcagtgataaggcaggggag
ccccagaagggtgaggatgtcgcgctccggagagcgaagagaagcggtcctgagtttgcc
gagttcagtgagagcgggcgggccggcgtggatgccggagctccggagaaccggggctcg
ttgtttgacggacacaagcaagtgaagtccgatttcagatggaacaggcaggaagggaga
gggaataaccggcaggatgagcccaagatcatcagcagcactttctctctgacgggggac
tctgcgcacaaccacgccgtggtgtactggtcagggcaaaacagcagcgtgatcctgatt
ctcaccaagctgtacgactttcatattggcagcgtcactgagagcactctttggagatct
actgactacggctcaacatacgacagaatgaacgacaaagtgggaaccaagactgtcctg
agttacctgtacgtctgtccaacaaacaagagaaagattatggtgttgacagatccagag
tttgaaagcagcatgctcatcagctctgatgagggagccagtttccagaagtaccgcctc
acattctacatcctgagccttttattccaccacacagaagaagactgggccttagcctac
agccacgaccaaaagttgtacagctcggtggactttggaagaaagtggcagctcattcac
gaacgtgtcacgccgagccgattctactggtctgtttccagcctcgacaaagagccagat
ctggtccacatggaggctcatacgccggatggaaatgtgcagtatgtcacgtgcagagct
cagacgtgcacagaagctaacaggaactacccgttccctggatacatcgacatcagctcg
ctggtggttcaggatgactacatattcatacaggttcctacatcaggacgagccacatat
tatgtttcctacaatagagacctttttatacaaatcaaactccccaaatactccctgcct
aaggatttacacattgtcagcagtgatgagaagcaggtatttgcggcggtgcaggagtgg
aaccagaacgacacctataacctctacttgtccgacaccagagggatctacttcaccttg
gccttggaaaatgtcaagaccactaggggcatcggtgggaaccagatgctggatctgtac
gaggttgcagggattaaagggatgttgatcgcaaacaagaggcaagacaaccaggtgaag
accttcatgacctacaacaagggccgggactggaggctcctgcaggctcctgccactgac
ctggatggaaacgacattcactgcatactgcctttctgttcactcaatctacagctgcaa
acgtcagagaacccttacttgtcaggaacaatctccaccaagagttctgcaccggggatt
atagtcgccacaggaaatattggagcagagctgtcttacaacaacgtgggcatgttcata
tcgtctgatgctggcaatagctggagacagatttttgaagaggagcacaacgtgtggttt
ctggacaaaggaggggccctcgttgcggtcaagcagccatctgtgcctaccaaacacttg
tgggtcagctttgatgaggggaggcagtggacccaacacagcttctccgcagtgcctctg
ttcgtggatggagtcttggtggaggctggggccgaaaaccaaataatgacattttttgga
cacttcagccaccgttctgaatggcagctcatcaagatagactacaagtccatcttcagc
aggcaatgtacagaggaagactatcaaacctggcacctgcacaatgagggcgagccatgc
gtgatgggacagaaacagatttacatgaagcgcaggcctgggaactactgcatgctggga
aaggactactcaagaatcctctcagcagagtcctgtatttgtcgcgctcatgattttgaa
tgtgattatggatatgagcgccgtggagacgggaactgccggcctgccttctggttcaac
ccctccaccgtgtccaggagctgcagccagggtcagaactacttcaacagcaccgggtac
cgtaaagtggtgttgaacaactgcaccaaaggagttaaagagatgtacacggccaggaag
cagcagtgccccaacagacctcccaaaggactcttggtaaccagcagagacggaaaactc
accgccaacctgggaagcaacgtcaccttcctggtccacctggatgagggtgactctatt
cgcaccaacatccagctggatttcggcgatggcacagcagtgtcctactccaacctgagc
tggactgaggaggggatcaaacacgtctacaagtcagtgggaatattccgtgtcactgct
ctggcagagaacacgctgggttacgacaccacaaccctctacctgcatgtcatatgtcca
gtggagcacatccatcttctcactccctttgtggtcataaagaacaaggaggtgaacatc
acagcagtggtcctgcccagccactcacgcactgttacttacttctggtggtttggcaac
aatactgagcccgtgataacattggacgggagtatctcacacaccttccccaacgacggg
atgcacaccatcacagtccaggtggctgcagccaacaccatcctgcaggataccaagacc
atagcagtgcaagaattcttcaaatctctacttttatcattctcccctaatctggacgag
ttcaacccagacatacccgagtggagacaggatgtggggagagtaattaagaaggctttg
ctccaagtgtcggacttcccagaggagcagctcctggtagccgtgttcccaggagtccca
acagctgccgagctcttcctgttaccccacaagaaccaatcagagggcaagaaaaagagt
gaggaggtgctagagcaggtatctgatgtaattgtaaccgcgctgaaccagaacttggtg
gagttcgagctgaagcctggtgtaagggtgattgtgtacaacacacagttaacacttgca
cccttggtggactccagccccagacacagcagctcggccatgctgatgctcctatcagtg
gtgttcctgggtctagcagtgttcctcatctacaaattcaagagaaaaataccttggatc
aacatatacgctgaggtgaaccaggagaaggagcaggagatgattggctcggtcggccag
ggtgacagcacgcctaaaatcactctgagtgagttctccgcatccaaagaactcatggag
aaagaactggatgccaggatcaaaaggggagttggaaacgcctgcgagagcacaagggag
attcccaactgtactagcgtgtaa
DBGET
integrated database retrieval system
