Trematomus bernacchii (emerald rockcod): 117483293
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Entry
117483293 CDS
T09643
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117483293 (pwp1)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
90S particles
Other 90S particles
117483293 (pwp1)
Pre-60S particles
Other pre-60S particles
117483293 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
WD40_RFWD3
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117483293
NCBI-ProteinID:
XP_033987455
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MSAQITCVGWVARGVSKETPDKVELSQEELARIISEAREEIGELAAEEEEDDDEGICEDN
LDGNTAEDVAAVPKKKKEDGKDDDDELAEYGLDRYDDEDAATSNLGDSLAGLTVYSCNEE
DPYITIKDTDQYEREDFQIKPSDNLIMTGRAEKDVCNLEIHVYNSDEDSLYVHHDILLPA
YPLCIEWLNFDPSPGEGAGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGTKKAAKKKKKG
KKGGAAAEPLEGHTDAVLDLSWNKLLRNVLASGSADDTVVLWDLTQGKPATTLRRHTDKV
QTLSFHPFEAQTLISGSYDKTAVLYDCRSPDNSNRTWRFSGQVERLAWNHFSPYNFLAST
EDGFIYCLDARSDKPLFTLKAHDAEVSGLDLSSQIKGCLVTSSADKHVKIWDILGNKPNL
VHSRDMKMGVLFCASCCPDHPFVYAFGGQKEGLRVWDISDVAAVTEVFGGRERMVANTGS
QASSAAASGEMEVSE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcagattacctgtgtcggatgggtagcgaggggcgtctccaaggaaacgccg
gacaaagttgagttgagccaagaagaacttgcgcgcatcattagtgaagcaagggaggag
attggggaactagcagccgaggaagaggaagacgacgatgaaggcatttgtgaagataat
ctcgatggtaatacagcggaggacgtagctgccgtcccaaagaagaagaaagaggatgga
aaggacgatgatgacgagctggcagagtacggcctggacagatatgatgatgaggatgca
gccacctctaatctgggcgacagtctggctgggctgacagtgtacagctgtaacgaggag
gatccctacatcaccatcaaagacacagaccagtacgagcgggaagacttccaaatcaaa
cccagtgacaatctgatcatgaccggccgggcggagaaggacgtctgcaatttagagatc
catgtttataactcggatgaggactctctgtatgtccatcacgatattctgctgccagcg
taccctctgtgcatcgagtggctcaactttgaccccagccccggagaaggagccggtaac
tacgctgctgtggggaacatgaccccccaaatcgatgtgtgggacctggatgttgtcgac
tgcttagagcccgccttcaccctggggaccaaaaaggcggccaagaagaaaaagaagggc
aagaagggtggggcagcagcagagcctttggagggccacacagacgcagtgctggattta
tcctggaacaaactgctcagaaatgtgctggccagtggatcagctgacgacaccgtggtg
ttgtgggatctcactcaaggcaaaccagccactactctgcgcaggcacactgataaggtt
cagacgttatcattccatccatttgaggcccagactctgatatcaggctcttatgataag
acggctgttctgtacgactgccggagtccagacaacagcaaccggacctggaggttcagc
gggcaggtggagcgtctggcctggaaccacttctccccgtacaacttcctggccagcaca
gaggatggatttatctactgtctggacgcacgctcagacaaacccctgttcacactgaag
gctcacgatgcagaagtgtcgggtttggacctcagcagccagatcaaaggatgcctggtc
acctcgtcagccgacaaacacgttaagatttgggacattttgggcaacaaacccaacctg
gtgcactcgagggatatgaaaatgggtgtgctgttctgtgcgtcgtgttgccctgatcac
cccttcgtctacgccttcggaggacagaaggaaggcttgagggtttgggatatcagtgat
gttgcagcagtgactgaggtgtttggcggtcgagagcgcatggtggcgaacacggggtcc
caggcttccagcgctgcagcctcgggagagatggaagtctccgagtga
DBGET
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