Trematomus bernacchii (emerald rockcod): 117483312
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Entry
117483312 CDS
T09643
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04217
Necroptosis
tben04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117483312
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117483312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117483312
03029 Mitochondrial biogenesis [BR:
tben03029
]
117483312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117483312
Enzymes [BR:
tben01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
117483312
Membrane trafficking [BR:
tben04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
117483312
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
117483312
RhoA-dependent endocytosis
117483312
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117483312
Retention of mitochondria
117483312
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117483312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-GeneID:
117483312
NCBI-ProteinID:
XP_033987482
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MEALIPVINKLQDVFNTVGADIIQLPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGVVTR
RPLILQLVHVEPGDARKHEDGREGEEWGKFLHTKNQIFTDFEEIRQEIENETERISGTNK
GISDDPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPNDIELQIKDLILKHISNPNCIILA
VSAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAGTDAMDVLMGRVIPVKLGLIG
VVNRSQLDINNKKSVADAIRDEHAFLQKKYPSLASRNGTKYLARTLNRLLMHHIRDCLPE
LKARINVLASQYQSLLSSYGEPVEDQSSTLLQLITKFAAEYCNTIEGTAKYIETAELCGG
ARICYIFHETFGRTLESVDPLGGLGTIDILTAIRNATGPRPSLFVPEISFELLVKKQVKR
LEEPSLRCVELVHEEMQRIIQHCSNYSTQELQRFPKLHEAIVEVVTSLLRKRLPITNDMV
HNLVAIELAYINTKHPDFADACGIMNNNIEEERRNRMRELPSAVPRDKSAGRGPAGLSGA
PGEPPAGGADMEGAKAPSAGPQGEQDGTGNWRGMLKKGDEAPSSRPGSPLRGAVNLLDVP
VPAARKLSSREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSELVGQ
LYKLGLLNELLTESEDMAQRRKEAADMLQALQKASQVIAEIRETHLW
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcttattcccgtaataaacaagctgcaagatgttttcaacacagtgggggcg
gatatcatacagctgccgcagatagcagttgtagggactcagagcagtggtaagagctcg
gtgctggagagcctggtgggccgggaccttcttcctcgggggaccggcgtcgtcaccagg
cggcctctcatcctccaactggtccatgtagaacctggagatgccaggaaacatgaagat
ggtagagaaggtgaagagtggggcaaatttctgcacacaaaaaatcagatcttcacagat
tttgaagaaatcaggcaagaaatagaaaatgaaacggagcgaatatcggggactaataag
gggatcagcgatgatcccattcatctgaagatattctctcctcacgttgtcaacctcacg
ctggtggatctgcctggcatcactaaggtgcccgtgggtgatcagcctaatgacattgag
cttcagataaaagatctaatcctgaagcacatctccaaccccaactgcatcatcctggct
gtctctgcggccaacaccgacatggccacctcggaggctctgaaggtcgcccgcgaggtc
gaccccgacggcaggaggaccctggctgtggtgaccaagctggacctgatggacgccggc
accgacgctatggacgtgctcatgggccgagtcattcctgtgaaactgggactcattgga
gtggtcaacaggagccagctggacatcaacaataagaagtctgtggccgacgccattcgg
gacgaacatgctttcctgcagaagaaatatccgtctctcgccagcaggaacggaaccaaa
tacctggccagaaccctcaacaggttgctgatgcatcacatcagagactgcctccccgag
ctgaaggcccggatcaacgtgctggcctcccagtaccagtccctgctgagcagctacggg
gagccggtggaggaccagagctccacgctgctgcagctcatcaccaagttcgccgcggag
tactgcaacaccatcgaaggcacggccaagtacatcgagacggccgagctgtgcggcgga
gccaggatttgttacatattccacgagacttttggccggacattggagtcggtggatcct
ctgggaggactcggcaccatcgacatcctgaccgccatcaggaacgcaacaggcccgcgt
ccgtccctgtttgtgccggagatctccttcgagctgctggtgaagaagcaggtgaagcgt
ctggaggagcccagcctgcgctgcgtggagctggtccacgaggagatgcagaggatcatc
cagcactgcagcaactacagcacccaggagctgcagaggttcccgaagctgcacgaggcc
atagtggaagtcgtcacctccctcctgaggaagaggctgcccatcaccaacgacatggtt
cataacctggtggccatagagctggcctacatcaacaccaaacacccagactttgcagac
gcctgtgggatcatgaacaataacatagaggaggaaaggagaaacaggatgagagagctg
ccctctgcagtgcccagggacaagtctgctggcaggggcccggctggcctctctggggct
cctggcgagcctcctgcgggtggagcagacatggagggggccaaggccccgtcagccggg
ccccagggggagcaggacggcacagggaactggagggggatgctgaagaaaggagacgaa
gcccccagctccagacctggaagcccccttagaggagctgtcaacctgctggatgtgcct
gtgccagctgccaggaagctgtcgtcacgtgagcagcgggactgtgaggtcatcgaacgc
ctcatcaagtcttacttcctcatcgttcgcaagaatatccaggacagtgtgcccaaagca
gtgatgcacttcctggtgaaccatgtgaaggacagcctccagagcgagctggtaggccag
ctgtataaattgggcctcctcaacgagctgctcactgagtcagaggacatggctcagcgg
cgcaaggaggctgccgacatgctacaggcattgcaaaaagccagccaggtgattgctgag
atcagggaaacacatctgtggtga
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