Trematomus bernacchii (emerald rockcod): 117483376
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Entry
117483376 CDS
T09643
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117483376
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117483376
09143 Cell growth and death
04210 Apoptosis
117483376
09144 Cellular community - eukaryotes
04530 Tight junction
117483376
04540 Gap junction
117483376
09142 Cell motility
04814 Motor proteins
117483376
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117483376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117483376
03036 Chromosome and associated proteins [BR:
tben03036
]
117483376
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117483376
04147 Exosome [BR:
tben04147
]
117483376
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117483376
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117483376
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117483376
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117483376
Exosomal proteins of other body fluids (saliva and urine)
117483376
Exosomal proteins of colorectal cancer cells
117483376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117483376
NCBI-ProteinID:
XP_033987590
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNSCWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDTVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgtcggtcaggctggagtccagattggcaattcatgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
acgtgtggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggttcggtcc
gggatctaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggaaaggagatcattgacacagtgctggac
aggatccgaaagctggctgaccagtgcaccggtcttcagggtttcctggtgttccatagc
ttcggagggggcaccggctctggcttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaaactggagttctccgtctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctcaccacccacaccaccctggagcactctgactgt
gccttcatggtagacaacgaggccatttatgatatctgccgtaggaacctcgatattgag
cgtccctcttacacaaacctgaacaggttgatcagtcagattgtgtcctccatcactgcc
tcccttcgctttgatggtgctctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttccctctggccacctatgcccctgttatttctgcagagaaa
gcttaccatgagcagttaaccgtggcagaaatcactaattcctgtttcgagccagccaat
cagttggtgaaatgtgacccacgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggccgctctggagaaagattacgaggaggttggagtcgactccatt
gagggtgagggagaggaagagggagaggaatattaa
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