KEGG   Trematomus bernacchii (emerald rockcod): 117483376
Entry
117483376         CDS       T09643                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04517  IgSF CAM signaling
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117483376
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117483376
  09143 Cell growth and death
   04210 Apoptosis
    117483376
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117483376
   04540 Gap junction
    117483376
  09142 Cell motility
   04814 Motor proteins
    117483376
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117483376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117483376
   03036 Chromosome and associated proteins [BR:tben03036]
    117483376
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117483376
   04147 Exosome [BR:tben04147]
    117483376
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117483376
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117483376
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117483376
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117483376
  Exosomal proteins of other body fluids (saliva and urine)
   117483376
  Exosomal proteins of colorectal cancer cells
   117483376
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117483376
NCBI-ProteinID: XP_033987590
LinkDB
Position
Unknown
AA seq 451 aa
MRECISIHVGQAGVQIGNSCWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDTVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtcggtcaggctggagtccagattggcaattcatgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
acgtgtggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggttcggtcc
gggatctaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggaaaggagatcattgacacagtgctggac
aggatccgaaagctggctgaccagtgcaccggtcttcagggtttcctggtgttccatagc
ttcggagggggcaccggctctggcttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaaactggagttctccgtctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctcaccacccacaccaccctggagcactctgactgt
gccttcatggtagacaacgaggccatttatgatatctgccgtaggaacctcgatattgag
cgtccctcttacacaaacctgaacaggttgatcagtcagattgtgtcctccatcactgcc
tcccttcgctttgatggtgctctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttccctctggccacctatgcccctgttatttctgcagagaaa
gcttaccatgagcagttaaccgtggcagaaatcactaattcctgtttcgagccagccaat
cagttggtgaaatgtgacccacgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggccgctctggagaaagattacgaggaggttggagtcgactccatt
gagggtgagggagaggaagagggagaggaatattaa

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