Trematomus bernacchii (emerald rockcod): 117483379
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Entry
117483379 CDS
T09643
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117483379
09143 Cell growth and death
04210 Apoptosis
117483379
09144 Cellular community - eukaryotes
04530 Tight junction
117483379
04540 Gap junction
117483379
09142 Cell motility
04814 Motor proteins
117483379
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117483379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117483379
03036 Chromosome and associated proteins [BR:
tben03036
]
117483379
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117483379
04147 Exosome [BR:
tben04147
]
117483379
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117483379
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117483379
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117483379
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117483379
Exosomal proteins of other body fluids (saliva and urine)
117483379
Exosomal proteins of colorectal cancer cells
117483379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117483379
NCBI-ProteinID:
XP_033987594
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGVQIGNSCWELYCLEHGIQPDGQMSSDKTLGGTDNSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQMITGKEDAANNYARGHYTIGKELIEVVLD
RVRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKPSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSQGDNDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacatcggtcaggctggagtccagattggcaattcatgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgtccagtgacaag
actcttggtggcacagacaattccttcaacacctttttcagtgagactggagctggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcattgatgaggttcgctcc
gggacctaccgccagctgttccaccctgagcagatgatcactggcaaggaggatgctgcc
aacaattacgcccgaggacactacaccattggcaaggagctcattgaagtggtgctggac
agggtccgcaaactgtctgaccagtgcaccggtcttcagggtttcctggtgttccacagc
ttcggaggaggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaagctggagttcgccgtctacccagctccccaggtgtccactgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggttgacaatgaggccatctatgatatctgccgtagaaacctcgatatcgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtatcctccatcactgcc
tcccttcgctttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttccctctggccacctatgcccctgttatttctgcagagaaa
gcttaccatgagcagttaaccgtgtcagaaatcactaattcctgtttcgagccagccaat
cagttggtgaaatgtgacccacgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatcaaaaccaagccctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggccgctctggagaaagattacgaggaggttggagctgatagtcag
ggagataacgatgaggaaggagaggagtattaa
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